RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 UBN2Q6ZU65 1347 aa13.27□□□□□ -0.29
LRRC28-204ENST00000558172 NEURL1BA8MQ27 555 aa13.26□□□□□ -0.29
LRRC28-204ENST00000558172 NPHP1O15259 732 aa13.26□□□□□ -0.29
LRRC28-204ENST00000558172 ALDH1L1O75891 902 aa13.26□□□□□ -0.29
LRRC28-204ENST00000558172 IGKV5-2P06315 115 aa13.26□□□□□ -0.29
LRRC28-204ENST00000558172 CCT4P50991 539 aaKnown RBP13.26□□□□□ -0.29
LRRC28-204ENST00000558172 ST5P78524 1137 aa13.26□□□□□ -0.29
LRRC28-204ENST00000558172 CNBD1Q8NA66 436 aa13.26□□□□□ -0.29
LRRC28-204ENST00000558172 FAM177BA6PVY3 158 aa13.25□□□□□ -0.29
LRRC28-204ENST00000558172 NTSR2O95665 410 aa13.25□□□□□ -0.29
LRRC28-204ENST00000558172 TRIM27P14373 513 aa13.25□□□□□ -0.29
LRRC28-204ENST00000558172 HSP90B1P14625 803 aaKnown RBP13.25□□□□□ -0.29
LRRC28-204ENST00000558172 PRR5LQ6MZQ0 368 aa13.25□□□□□ -0.29
LRRC28-204ENST00000558172 PPP1R1BQ9UD71 204 aaPredicted RBP13.25□□□□□ -0.29
LRRC28-204ENST00000558172 TRMT112Q9UI30 125 aaKnown RBP13.25□□□□□ -0.29
LRRC28-204ENST00000558172 MYH3P11055 1940 aa13.25□□□□□ -0.29
LRRC28-204ENST00000558172 ABCC4O15439 1325 aa13.24□□□□□ -0.29
LRRC28-204ENST00000558172 SH3TC1Q8TE82 1336 aa13.24□□□□□ -0.29
LRRC28-204ENST00000558172 PCCAP05165 728 aaPredicted RBP13.24□□□□□ -0.29
LRRC28-204ENST00000558172 GCKRQ14397 625 aa13.24□□□□□ -0.29
LRRC28-204ENST00000558172 CWF19L2Q2TBE0 894 aaKnown RBP13.24□□□□□ -0.29
LRRC28-204ENST00000558172 SLC10A5Q5PT55 438 aa13.24□□□□□ -0.29
LRRC28-204ENST00000558172 INTS3Q68E01 1043 aaKnown RBP13.24□□□□□ -0.29
LRRC28-204ENST00000558172 FTSJ3Q8IY81 847 aaKnown RBP13.24□□□□□ -0.29
LRRC28-204ENST00000558172 DZIP1LQ8IYY4 767 aaKnown RBP13.24□□□□□ -0.29
LRRC28-204ENST00000558172 ZBTB38Q8NAP3 1195 aaPredicted RBP13.24□□□□□ -0.29
LRRC28-204ENST00000558172 PDZRN3Q9UPQ7 1066 aa13.24□□□□□ -0.29
LRRC28-204ENST00000558172 CD2APQ9Y5K6 639 aa13.24□□□□□ -0.29
LRRC28-204ENST00000558172 ANKRD31Q8N7Z5 1873 aa13.24□□□□□ -0.29
LRRC28-204ENST00000558172 LAMB2P55268 1798 aa13.23□□□□□ -0.29
LRRC28-204ENST00000558172 BRIP1Q9BX63 1249 aa13.23□□□□□ -0.29
LRRC28-204ENST00000558172 RIC1Q4ADV7 1423 aa13.22□□□□□ -0.29
LRRC28-204ENST00000558172 DDX60Q8IY21 1712 aaKnown RBP13.22□□□□□ -0.29
LRRC28-204ENST00000558172 H7C1W4 665 aa13.22□□□□□ -0.29
LRRC28-204ENST00000558172 PDE6BP35913 854 aa13.22□□□□□ -0.29
LRRC28-204ENST00000558172 PDE3AQ14432 1141 aa13.22□□□□□ -0.29
LRRC28-204ENST00000558172 ERFEQ4G0M1 354 aa13.22□□□□□ -0.29
LRRC28-204ENST00000558172 CLUAP1Q96AJ1 413 aa13.22□□□□□ -0.29
LRRC28-204ENST00000558172 FAM89AQ96GI7 184 aa13.22□□□□□ -0.29
LRRC28-204ENST00000558172 C9orf78Q9NZ63 289 aaPredicted RBP13.22□□□□□ -0.29
LRRC28-204ENST00000558172 C10orf71Q711Q0 1435 aa13.22□□□□□ -0.29
LRRC28-204ENST00000558172 CDHR2Q9BYE9 1310 aa13.21□□□□□ -0.29
LRRC28-204ENST00000558172 GRM8O00222 908 aa13.21□□□□□ -0.29
LRRC28-204ENST00000558172 CENPBP07199 599 aaPredicted RBP13.21□□□□□ -0.29
LRRC28-204ENST00000558172 TGFB2P61812 414 aa13.21□□□□□ -0.29
LRRC28-204ENST00000558172 NUTM1Q86Y26 1132 aa13.21□□□□□ -0.29
LRRC28-204ENST00000558172 NLRP3Q96P20 1036 aa13.21□□□□□ -0.29
LRRC28-204ENST00000558172 HDAC5Q9UQL6 1122 aa13.21□□□□□ -0.29
LRRC28-204ENST00000558172 UTYO14607 1347 aa13.2□□□□□ -0.3
LRRC28-204ENST00000558172 IRS4O14654 1257 aaPredicted RBP13.2□□□□□ -0.3
LRRC28-204ENST00000558172 PLIN1O60240 522 aa13.2□□□□□ -0.3
LRRC28-204ENST00000558172 RRP1P56182 461 aaKnown RBP13.2□□□□□ -0.3
LRRC28-204ENST00000558172 TMEM57Q8N5G2 664 aa13.2□□□□□ -0.3
LRRC28-204ENST00000558172 TNNQ9UQP3 1299 aa13.2□□□□□ -0.3
LRRC28-204ENST00000558172 DLEC1Q9Y238 1755 aa13.2□□□□□ -0.3
LRRC28-204ENST00000558172 KLRG2A4D1S0 409 aaPredicted RBP13.19□□□□□ -0.3
LRRC28-204ENST00000558172 PDE8AO60658 829 aa13.19□□□□□ -0.3
LRRC28-204ENST00000558172 UBE3BQ7Z3V4 1068 aa13.19□□□□□ -0.3
LRRC28-204ENST00000558172 KLHL34Q8N239 644 aa13.19□□□□□ -0.3
LRRC28-204ENST00000558172 CCDC24Q8N4L8 307 aa13.19□□□□□ -0.3
LRRC28-204ENST00000558172 USP44Q9H0E7 712 aa13.19□□□□□ -0.3
LRRC28-204ENST00000558172 CHMP4BQ9H444 224 aaKnown RBP13.19□□□□□ -0.3
LRRC28-204ENST00000558172 H0YIN7 160 aa13.18□□□□□ -0.3
LRRC28-204ENST00000558172 GNAI3P08754 354 aa13.18□□□□□ -0.3
LRRC28-204ENST00000558172 HCLS1P14317 486 aaPredicted RBP13.18□□□□□ -0.3
LRRC28-204ENST00000558172 CASP7P55210 303 aa13.18□□□□□ -0.3
LRRC28-204ENST00000558172 RTL5Q5HYW3 569 aaPredicted RBP13.18□□□□□ -0.3
LRRC28-204ENST00000558172 SYNE4Q8N205 404 aa13.18□□□□□ -0.3
LRRC28-204ENST00000558172 PLA2G12BQ9BX93 195 aa13.18□□□□□ -0.3
LRRC28-204ENST00000558172 FHDC1Q9C0D6 1143 aaPredicted RBP13.18□□□□□ -0.3
LRRC28-204ENST00000558172 KIAA1551Q9HCM1 1747 aa13.18□□□□□ -0.3
LRRC28-204ENST00000558172 ABCC12Q96J65 1359 aa13.18□□□□□ -0.3
LRRC28-204ENST00000558172 BRCA1P38398 1863 aaKnown RBP13.17□□□□□ -0.3
LRRC28-204ENST00000558172 RLBP1P12271 317 aa13.17□□□□□ -0.3
LRRC28-204ENST00000558172 SF3B3Q15393 1217 aaKnown RBP13.17□□□□□ -0.3
LRRC28-204ENST00000558172 ITPRIPQ8IWB1 547 aa13.17□□□□□ -0.3
LRRC28-204ENST00000558172 PANK1Q8TE04 598 aa13.17□□□□□ -0.3
LRRC28-204ENST00000558172 JARID2Q92833 1246 aaPredicted RBP13.17□□□□□ -0.3
LRRC28-204ENST00000558172 SYT17Q9BSW7 474 aa13.17□□□□□ -0.3
LRRC28-204ENST00000558172 DDX19BQ9UMR2 479 aa13.17□□□□□ -0.3
LRRC28-204ENST00000558172 SUPT16HQ9Y5B9 1047 aaKnown RBP13.17□□□□□ -0.3
LRRC28-204ENST00000558172 TNRC6CQ9HCJ0 1690 aaKnown RBP13.17□□□□□ -0.3
LRRC28-204ENST00000558172 CACNA1SQ13698 1873 aa13.16□□□□□ -0.3
LRRC28-204ENST00000558172 NBPF7P0C2Y1 421 aaPredicted RBP13.16□□□□□ -0.3
LRRC28-204ENST00000558172 UBTFL1P0CB47 393 aaPredicted RBP13.16□□□□□ -0.3
LRRC28-204ENST00000558172 MVPQ14764 893 aaKnown RBP13.16□□□□□ -0.3
LRRC28-204ENST00000558172 CRY2Q49AN0 593 aa13.16□□□□□ -0.3
LRRC28-204ENST00000558172 C2CD5Q86YS7 1000 aa13.16□□□□□ -0.3
LRRC28-204ENST00000558172 MASTLQ96GX5 879 aa13.16□□□□□ -0.3
LRRC28-204ENST00000558172 COL11A2P13942 1736 aaPredicted RBP13.16□□□□□ -0.3
LRRC28-204ENST00000558172 ZBTB7BO15156 539 aaPredicted RBP13.15□□□□□ -0.3
LRRC28-204ENST00000558172 SRGNP10124 158 aa13.15□□□□□ -0.3
LRRC28-204ENST00000558172 NPR1P16066 1061 aa13.15□□□□□ -0.3
LRRC28-204ENST00000558172 ALDH1B1P30837 517 aa13.15□□□□□ -0.3
LRRC28-204ENST00000558172 CCDC152Q4G0S7 254 aa13.15□□□□□ -0.3
LRRC28-204ENST00000558172 STYK1Q6J9G0 422 aa13.15□□□□□ -0.3
LRRC28-204ENST00000558172 RPGRQ92834 1020 aaKnown RBP13.15□□□□□ -0.3
LRRC28-204ENST00000558172 RBM17Q96I25 401 aaKnown RBP13.15□□□□□ -0.3
LRRC28-204ENST00000558172 COG6Q9Y2V7 657 aa13.15□□□□□ -0.3
LRRC28-204ENST00000558172 A0A0G2JLW4 131 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms