RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 MX1P20591 662 aa12.85□□□□□ -0.35
SEMA4B-204ENST00000558065 LZTS2Q9BRK4 669 aa12.85□□□□□ -0.35
SEMA4B-204ENST00000558065 GAPVD1Q14C86 1478 aa12.85□□□□□ -0.35
SEMA4B-204ENST00000558065 PPFIA4O75335 1185 aa12.85□□□□□ -0.35
SEMA4B-204ENST00000558065 MYSM1Q5VVJ2 828 aa12.85□□□□□ -0.35
SEMA4B-204ENST00000558065 SUN2Q9UH99 717 aa12.85□□□□□ -0.35
SEMA4B-204ENST00000558065 G3BP2Q9UN86 482 aaKnown RBP12.85□□□□□ -0.35
SEMA4B-204ENST00000558065 CHGAP10645 457 aaKnown RBP12.84□□□□□ -0.35
SEMA4B-204ENST00000558065 DMRT2Q9Y5R5 561 aa12.84□□□□□ -0.35
SEMA4B-204ENST00000558065 GRIN2AQ12879 1464 aa12.84□□□□□ -0.35
SEMA4B-204ENST00000558065 ISM2Q6H9L7 571 aa12.84□□□□□ -0.35
SEMA4B-204ENST00000558065 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.84□□□□□ -0.35
SEMA4B-204ENST00000558065 GDPD2Q9HCC8 539 aa12.83□□□□□ -0.35
SEMA4B-204ENST00000558065 ERC2O15083 957 aa12.83□□□□□ -0.36
SEMA4B-204ENST00000558065 NAP1L1P55209 391 aaKnown RBP12.83□□□□□ -0.36
SEMA4B-204ENST00000558065 CCDC144BQ3MJ40 725 aa12.83□□□□□ -0.36
SEMA4B-204ENST00000558065 IQCA1Q86XH1 822 aa12.83□□□□□ -0.36
SEMA4B-204ENST00000558065 CCDC144CPQ8IYA2 1237 aa12.83□□□□□ -0.36
SEMA4B-204ENST00000558065 VPS18Q9P253 973 aa12.83□□□□□ -0.36
SEMA4B-204ENST00000558065 FCHSD2O94868 740 aa12.83□□□□□ -0.36
SEMA4B-204ENST00000558065 CCDC178Q5BJE1 867 aa12.83□□□□□ -0.36
SEMA4B-204ENST00000558065 USP48Q86UV5 1035 aa12.83□□□□□ -0.36
SEMA4B-204ENST00000558065 TMX4Q9H1E5 349 aaPredicted RBP12.83□□□□□ -0.36
SEMA4B-204ENST00000558065 NUB1Q9Y5A7 615 aa12.83□□□□□ -0.36
SEMA4B-204ENST00000558065 CAPN15O75808 1086 aa12.82□□□□□ -0.36
SEMA4B-204ENST00000558065 TBC1D9Q6ZT07 1266 aa12.82□□□□□ -0.36
SEMA4B-204ENST00000558065 PLA2G4DQ86XP0 818 aa12.82□□□□□ -0.36
SEMA4B-204ENST00000558065 H7C1W4 665 aa12.82□□□□□ -0.36
SEMA4B-204ENST00000558065 USP4Q13107 963 aa12.82□□□□□ -0.36
SEMA4B-204ENST00000558065 CABS1Q96KC9 395 aa12.82□□□□□ -0.36
SEMA4B-204ENST00000558065 FAM107BQ9H098 131 aa12.82□□□□□ -0.36
SEMA4B-204ENST00000558065 KCND1Q9NSA2 647 aa12.82□□□□□ -0.36
SEMA4B-204ENST00000558065 CHUKO15111 745 aa12.82□□□□□ -0.36
SEMA4B-204ENST00000558065 BMP2KLQ5H9B9 411 aa12.82□□□□□ -0.36
SEMA4B-204ENST00000558065 DZIP3Q86Y13 1208 aaKnown RBP12.82□□□□□ -0.36
SEMA4B-204ENST00000558065 XAGE2Q96GT9 111 aa12.82□□□□□ -0.36
SEMA4B-204ENST00000558065 MRFAP1L1Q96HT8 127 aa12.82□□□□□ -0.36
SEMA4B-204ENST00000558065 ABCC2Q92887 1545 aa12.81□□□□□ -0.36
SEMA4B-204ENST00000558065 FMNL1O95466 1100 aaPredicted RBP12.81□□□□□ -0.36
SEMA4B-204ENST00000558065 CCDC158Q5M9N0 1113 aa12.81□□□□□ -0.36
SEMA4B-204ENST00000558065 EXOC8Q8IYI6 725 aa12.81□□□□□ -0.36
SEMA4B-204ENST00000558065 CLIC6Q96NY7 704 aa12.81□□□□□ -0.36
SEMA4B-204ENST00000558065 ARPC5LQ9BPX5 153 aa12.81□□□□□ -0.36
SEMA4B-204ENST00000558065 RTEL1Q9NZ71 1219 aa12.81□□□□□ -0.36
SEMA4B-204ENST00000558065 ROCK1Q13464 1354 aa12.81□□□□□ -0.36
SEMA4B-204ENST00000558065 MAP2K7O14733 419 aa12.81□□□□□ -0.36
SEMA4B-204ENST00000558065 THUMPD2Q9BTF0 503 aaKnown RBP12.81□□□□□ -0.36
SEMA4B-204ENST00000558065 FRMD3A2A2Y4 597 aa12.81□□□□□ -0.36
SEMA4B-204ENST00000558065 RTN3O95197 1032 aaPredicted RBP12.81□□□□□ -0.36
SEMA4B-204ENST00000558065 TLDC1Q6P9B6 456 aa12.81□□□□□ -0.36
SEMA4B-204ENST00000558065 SPDYE1Q8NFV5 336 aaPredicted RBP12.81□□□□□ -0.36
SEMA4B-204ENST00000558065 CCAR2Q8N163 923 aaKnown RBP12.8□□□□□ -0.36
SEMA4B-204ENST00000558065 EZH1Q92800 747 aaPredicted RBP12.8□□□□□ -0.36
SEMA4B-204ENST00000558065 TADA3O75528 432 aa12.8□□□□□ -0.36
SEMA4B-204ENST00000558065 ATP2B2Q01814 1243 aa12.8□□□□□ -0.36
SEMA4B-204ENST00000558065 SPATA21Q7Z572 469 aa12.8□□□□□ -0.36
SEMA4B-204ENST00000558065 LRRC8AQ8IWT6 810 aa12.8□□□□□ -0.36
SEMA4B-204ENST00000558065 RALGAPBQ86X10 1494 aa12.8□□□□□ -0.36
SEMA4B-204ENST00000558065 ZBED6P86452 979 aa12.8□□□□□ -0.36
SEMA4B-204ENST00000558065 GIMAP6Q6P9H5 292 aa12.8□□□□□ -0.36
SEMA4B-204ENST00000558065 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.8□□□□□ -0.36
SEMA4B-204ENST00000558065 KIRREL3Q8IZU9 778 aa12.8□□□□□ -0.36
SEMA4B-204ENST00000558065 TMEM87AQ8NBN3 555 aa12.8□□□□□ -0.36
SEMA4B-204ENST00000558065 UBXN4Q92575 508 aa12.8□□□□□ -0.36
SEMA4B-204ENST00000558065 TMEM165Q9HC07 324 aa12.8□□□□□ -0.36
SEMA4B-204ENST00000558065 A0A1B0GUA9 196 aa12.79□□□□□ -0.36
SEMA4B-204ENST00000558065 CCDC15Q0P6D6 951 aa12.79□□□□□ -0.36
SEMA4B-204ENST00000558065 DDX11Q96FC9 970 aa12.79□□□□□ -0.36
SEMA4B-204ENST00000558065 PEX19P40855 299 aa12.79□□□□□ -0.36
SEMA4B-204ENST00000558065 CLNS1AP54105 237 aaKnown RBP12.79□□□□□ -0.36
SEMA4B-204ENST00000558065 DHX8Q14562 1220 aaKnown RBP12.79□□□□□ -0.36
SEMA4B-204ENST00000558065 EPC1Q9H2F5 836 aa12.79□□□□□ -0.36
SEMA4B-204ENST00000558065 PDE6BP35913 854 aa12.79□□□□□ -0.36
SEMA4B-204ENST00000558065 FNTAP49354 379 aa12.79□□□□□ -0.36
SEMA4B-204ENST00000558065 ZNF75DP51815 510 aa12.79□□□□□ -0.36
SEMA4B-204ENST00000558065 MYL1P05976 194 aa12.78□□□□□ -0.36
SEMA4B-204ENST00000558065 TRMT1Q9NXH9 659 aaKnown RBP12.78□□□□□ -0.36
SEMA4B-204ENST00000558065 RDXP35241 583 aaKnown RBP12.78□□□□□ -0.36
SEMA4B-204ENST00000558065 ARID5BQ14865 1188 aa12.78□□□□□ -0.36
SEMA4B-204ENST00000558065 OR8K1Q8NGG5 319 aa12.78□□□□□ -0.36
SEMA4B-204ENST00000558065 BICC1Q9H694 974 aaKnown RBP12.78□□□□□ -0.36
SEMA4B-204ENST00000558065 KCNV2Q8TDN2 545 aa12.78□□□□□ -0.36
SEMA4B-204ENST00000558065 FMNL2Q96PY5 1086 aa12.78□□□□□ -0.36
SEMA4B-204ENST00000558065 SYNMO15061 1565 aa12.78□□□□□ -0.36
SEMA4B-204ENST00000558065 TPP2P29144 1249 aaPredicted RBP12.77□□□□□ -0.36
SEMA4B-204ENST00000558065 MAGEA10P43363 369 aaPredicted RBP12.77□□□□□ -0.36
SEMA4B-204ENST00000558065 APOBRQ0VD83 1088 aa12.77□□□□□ -0.36
SEMA4B-204ENST00000558065 FAM177A1Q8N128 213 aaPredicted RBP12.77□□□□□ -0.36
SEMA4B-204ENST00000558065 HMGXB3Q12766 1538 aa12.77□□□□□ -0.36
SEMA4B-204ENST00000558065 ENO4A6NNW6 628 aa12.77□□□□□ -0.37
SEMA4B-204ENST00000558065 RARSP54136 660 aaKnown RBP12.77□□□□□ -0.37
SEMA4B-204ENST00000558065 CCZ1BP86790 482 aa12.77□□□□□ -0.37
SEMA4B-204ENST00000558065 CCZ1P86791 482 aaPredicted RBP12.77□□□□□ -0.37
SEMA4B-204ENST00000558065 FAN1Q9Y2M0 1017 aa12.77□□□□□ -0.37
SEMA4B-204ENST00000558065 CC2D2AQ9P2K1 1620 aa12.77□□□□□ -0.37
SEMA4B-204ENST00000558065 SRGAP3O43295 1099 aa12.77□□□□□ -0.37
SEMA4B-204ENST00000558065 KCNB1Q14721 858 aa12.77□□□□□ -0.37
SEMA4B-204ENST00000558065 FAM169AQ9Y6X4 670 aa12.77□□□□□ -0.37
SEMA4B-204ENST00000558065 N4BP1O75113 896 aaKnown RBP12.76□□□□□ -0.37
SEMA4B-204ENST00000558065 TRIM42Q8IWZ5 723 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms