RNA–Protein interactions for RNA: ENST00000557769.5

CCDC85C-207, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 2 BASIC

Gene CCDC85C, Length 3,793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-207ENST00000557769 RUFY2Q8WXA3 655 aa12.93□□□□□ -0.34
CCDC85C-207ENST00000557769 GPATCH3Q96I76 525 aa12.93□□□□□ -0.34
CCDC85C-207ENST00000557769 UBAP1LF5GYI3 381 aa12.92□□□□□ -0.34
CCDC85C-207ENST00000557769 TERF1P54274 439 aa12.92□□□□□ -0.34
CCDC85C-207ENST00000557769 PDLIM2Q96JY6 352 aa12.92□□□□□ -0.34
CCDC85C-207ENST00000557769 LRRC2Q9BYS8 371 aa12.92□□□□□ -0.34
CCDC85C-207ENST00000557769 SLIT3O75094 1523 aa12.92□□□□□ -0.34
CCDC85C-207ENST00000557769 OVOS2A0A0J9YW53 1432 aa12.92□□□□□ -0.34
CCDC85C-207ENST00000557769 SBNO1A3KN83 1393 aa12.92□□□□□ -0.34
CCDC85C-207ENST00000557769 GTF2F1P35269 517 aaKnown RBP eCLIP12.92□□□□□ -0.34
CCDC85C-207ENST00000557769 CCT4P50991 539 aaKnown RBP12.92□□□□□ -0.34
CCDC85C-207ENST00000557769 HDGFL1Q5TGJ6 251 aa12.92□□□□□ -0.34
CCDC85C-207ENST00000557769 OVOS2Q6IE36 1432 aa12.92□□□□□ -0.34
CCDC85C-207ENST00000557769 RAB11FIP3O75154 756 aa12.92□□□□□ -0.34
CCDC85C-207ENST00000557769 F13A1P00488 732 aa12.92□□□□□ -0.34
CCDC85C-207ENST00000557769 PTPN14Q15678 1187 aa12.92□□□□□ -0.34
CCDC85C-207ENST00000557769 HSP90AB2PQ58FF8 381 aa12.92□□□□□ -0.34
CCDC85C-207ENST00000557769 CLASRPQ8N2M8 674 aaKnown RBP12.92□□□□□ -0.34
CCDC85C-207ENST00000557769 DMTNQ08495 405 aa12.91□□□□□ -0.34
CCDC85C-207ENST00000557769 MNS1Q8NEH6 495 aa12.91□□□□□ -0.34
CCDC85C-207ENST00000557769 PHF23Q9BUL5 403 aaPredicted RBP12.91□□□□□ -0.34
CCDC85C-207ENST00000557769 BIN1O00499 593 aa12.91□□□□□ -0.34
CCDC85C-207ENST00000557769 TTLL5Q6EMB2 1281 aa12.91□□□□□ -0.34
CCDC85C-207ENST00000557769 CCDC73Q6ZRK6 1079 aa12.91□□□□□ -0.34
CCDC85C-207ENST00000557769 PRDM4Q9UKN5 801 aa12.91□□□□□ -0.34
CCDC85C-207ENST00000557769 NFAT5O94916 1531 aa12.9□□□□□ -0.34
CCDC85C-207ENST00000557769 TNS3Q68CZ2 1445 aa12.9□□□□□ -0.34
CCDC85C-207ENST00000557769 GTF3C6Q969F1 213 aa12.9□□□□□ -0.34
CCDC85C-207ENST00000557769 CCDC8Q9H0W5 538 aaPredicted RBP12.9□□□□□ -0.34
CCDC85C-207ENST00000557769 ZNF330Q9Y3S2 320 aaPredicted RBP12.9□□□□□ -0.34
CCDC85C-207ENST00000557769 HTATSF1O43719 755 aaKnown RBP12.9□□□□□ -0.34
CCDC85C-207ENST00000557769 TYRO3Q06418 890 aa12.9□□□□□ -0.34
CCDC85C-207ENST00000557769 TTC21BQ7Z4L5 1316 aa12.9□□□□□ -0.34
CCDC85C-207ENST00000557769 ME1P48163 572 aa12.9□□□□□ -0.35
CCDC85C-207ENST00000557769 FLIIQ13045 1269 aa12.9□□□□□ -0.35
CCDC85C-207ENST00000557769 PPP1R42Q7Z4L9 355 aa12.9□□□□□ -0.35
CCDC85C-207ENST00000557769 USHBP1Q8N6Y0 703 aa12.9□□□□□ -0.35
CCDC85C-207ENST00000557769 BOLA2Q9H3K6 86 aa12.9□□□□□ -0.35
CCDC85C-207ENST00000557769 USP31Q70CQ4 1352 aa12.89□□□□□ -0.35
CCDC85C-207ENST00000557769 NPHP3Q7Z494 1330 aa12.89□□□□□ -0.35
CCDC85C-207ENST00000557769 TPM3P06753 285 aa12.89□□□□□ -0.35
CCDC85C-207ENST00000557769 UVSSAQ2YD98 709 aa12.89□□□□□ -0.35
CCDC85C-207ENST00000557769 CEP135Q66GS9 1140 aa12.89□□□□□ -0.35
CCDC85C-207ENST00000557769 PDILTQ8N807 584 aa12.89□□□□□ -0.35
CCDC85C-207ENST00000557769 HSP90AA4PQ58FG1 418 aa12.89□□□□□ -0.35
CCDC85C-207ENST00000557769 AACSQ86V21 672 aa12.89□□□□□ -0.35
CCDC85C-207ENST00000557769 DNAJC2Q99543 621 aaKnown RBP12.89□□□□□ -0.35
CCDC85C-207ENST00000557769 SPATA31A3Q5VYP0 1347 aa12.89□□□□□ -0.35
CCDC85C-207ENST00000557769 CCDC30Q5VVM6 783 aa12.89□□□□□ -0.35
CCDC85C-207ENST00000557769 PEAK1Q9H792 1746 aa12.88□□□□□ -0.35
CCDC85C-207ENST00000557769 LTN1O94822 1766 aa12.88□□□□□ -0.35
CCDC85C-207ENST00000557769 COL18A1P39060 1754 aa12.88□□□□□ -0.35
CCDC85C-207ENST00000557769 CCDC66A2RUB6 948 aa12.88□□□□□ -0.35
CCDC85C-207ENST00000557769 KINO60870 393 aaKnown RBP12.88□□□□□ -0.35
CCDC85C-207ENST00000557769 KRT28Q7Z3Y7 464 aa12.88□□□□□ -0.35
CCDC85C-207ENST00000557769 LIG1P18858 919 aa12.88□□□□□ -0.35
CCDC85C-207ENST00000557769 PIP4K2BP78356 416 aa12.88□□□□□ -0.35
CCDC85C-207ENST00000557769 BLOC1S2Q6QNY1 142 aa12.88□□□□□ -0.35
CCDC85C-207ENST00000557769 GTPBP4Q9BZE4 634 aaKnown RBP12.88□□□□□ -0.35
CCDC85C-207ENST00000557769 RAB11FIP4Q86YS3 637 aa12.88□□□□□ -0.35
CCDC85C-207ENST00000557769 USP16Q9Y5T5 823 aa12.88□□□□□ -0.35
CCDC85C-207ENST00000557769 TAF7Q15545 349 aaPredicted RBP12.87□□□□□ -0.35
CCDC85C-207ENST00000557769 ZNF710Q8N1W2 664 aa12.87□□□□□ -0.35
CCDC85C-207ENST00000557769 FAM200AQ8TCP9 573 aa12.87□□□□□ -0.35
CCDC85C-207ENST00000557769 SKILP12757 684 aa12.87□□□□□ -0.35
CCDC85C-207ENST00000557769 G3BP1Q13283 466 aaKnown RBP eCLIP12.87□□□□□ -0.35
CCDC85C-207ENST00000557769 RASEFQ8IZ41 740 aa12.87□□□□□ -0.35
CCDC85C-207ENST00000557769 ZSWIM4Q9H7M6 989 aa12.87□□□□□ -0.35
CCDC85C-207ENST00000557769 TEFQ10587 303 aa12.86□□□□□ -0.35
CCDC85C-207ENST00000557769 PA2G4Q9UQ80 394 aaKnown RBP12.86□□□□□ -0.35
CCDC85C-207ENST00000557769 ABCC4O15439 1325 aa12.86□□□□□ -0.35
CCDC85C-207ENST00000557769 MAP2P11137 1827 aaKnown RBP12.86□□□□□ -0.35
CCDC85C-207ENST00000557769 TTC21AQ8NDW8 1320 aa12.86□□□□□ -0.35
CCDC85C-207ENST00000557769 ZSCAN20P17040 1043 aaPredicted RBP12.86□□□□□ -0.35
CCDC85C-207ENST00000557769 CCT2P78371 535 aaKnown RBP12.86□□□□□ -0.35
CCDC85C-207ENST00000557769 PNPLA6Q8IY17 1366 aa12.86□□□□□ -0.35
CCDC85C-207ENST00000557769 A0A0G2JS52 829 aa12.85□□□□□ -0.35
CCDC85C-207ENST00000557769 ELF2Q15723 593 aa12.85□□□□□ -0.35
CCDC85C-207ENST00000557769 CYP2E1P05181 493 aaPredicted RBP12.85□□□□□ -0.35
CCDC85C-207ENST00000557769 SNX14Q9Y5W7 946 aa12.85□□□□□ -0.35
CCDC85C-207ENST00000557769 LMO7Q8WWI1 1683 aa12.85□□□□□ -0.35
CCDC85C-207ENST00000557769 LARGE1O95461 756 aa12.85□□□□□ -0.35
CCDC85C-207ENST00000557769 PSME1Q06323 249 aa12.85□□□□□ -0.35
CCDC85C-207ENST00000557769 ARID5BQ14865 1188 aa12.85□□□□□ -0.35
CCDC85C-207ENST00000557769 RNF20Q5VTR2 975 aa12.85□□□□□ -0.35
CCDC85C-207ENST00000557769 URI1O94763 535 aaPredicted RBP12.84□□□□□ -0.35
CCDC85C-207ENST00000557769 RHPN1Q8TCX5 695 aa12.84□□□□□ -0.35
CCDC85C-207ENST00000557769 CBX8Q9HC52 389 aa12.84□□□□□ -0.35
CCDC85C-207ENST00000557769 IBTKQ9P2D0 1353 aaPredicted RBP12.84□□□□□ -0.35
CCDC85C-207ENST00000557769 ATP2B1P20020 1258 aa12.84□□□□□ -0.35
CCDC85C-207ENST00000557769 PDCP20941 246 aa12.84□□□□□ -0.35
CCDC85C-207ENST00000557769 NEUROD6Q96NK8 337 aa12.84□□□□□ -0.35
CCDC85C-207ENST00000557769 RGPD5Q99666 1765 aa12.84□□□□□ -0.35
CCDC85C-207ENST00000557769 NLRP6P59044 892 aa12.84□□□□□ -0.35
CCDC85C-207ENST00000557769 TPM4P67936 248 aa12.84□□□□□ -0.35
CCDC85C-207ENST00000557769 CDC37L1Q7L3B6 337 aa12.84□□□□□ -0.35
CCDC85C-207ENST00000557769 PHAXQ9H814 394 aaKnown RBP12.84□□□□□ -0.35
CCDC85C-207ENST00000557769 KRT222Q8N1A0 295 aa12.83□□□□□ -0.35
CCDC85C-207ENST00000557769 KIF18AQ8NI77 898 aa12.83□□□□□ -0.35
CCDC85C-207ENST00000557769 NSD2O96028 1365 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms