RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 VTI1AQ96AJ9 217 aa6.21□□□□□ -1.42
GPHN-216ENST00000557678 TRIM11Q96F44 468 aa6.21□□□□□ -1.42
GPHN-216ENST00000557678 PNMA5Q96PV4 448 aa6.21□□□□□ -1.42
GPHN-216ENST00000557678 ZNF587Q96SQ5 575 aaPredicted RBP6.21□□□□□ -1.42
GPHN-216ENST00000557678 C2orf49Q9BVC5 232 aaPredicted RBP6.21□□□□□ -1.42
GPHN-216ENST00000557678 UBE2OQ9C0C9 1292 aaKnown RBP6.21□□□□□ -1.42
GPHN-216ENST00000557678 USP17L15C9J2P7 530 aa6.2□□□□□ -1.42
GPHN-216ENST00000557678 USP17L10C9JJH3 530 aa6.2□□□□□ -1.42
GPHN-216ENST00000557678 USP17L13C9JLJ4 530 aa6.2□□□□□ -1.42
GPHN-216ENST00000557678 USP17L12C9JPN9 530 aa6.2□□□□□ -1.42
GPHN-216ENST00000557678 USP17L11C9JVI0 530 aa6.2□□□□□ -1.42
GPHN-216ENST00000557678 USP17L21D6R901 530 aa6.2□□□□□ -1.42
GPHN-216ENST00000557678 USP17L18D6R9N7 530 aa6.2□□□□□ -1.42
GPHN-216ENST00000557678 USP17L22D6RA61 530 aa6.2□□□□□ -1.42
GPHN-216ENST00000557678 USP17L17D6RBQ6 530 aa6.2□□□□□ -1.42
GPHN-216ENST00000557678 USP17L19D6RCP7 530 aa6.2□□□□□ -1.42
GPHN-216ENST00000557678 USP17L20D6RJB6 530 aa6.2□□□□□ -1.42
GPHN-216ENST00000557678 ADH7P40394 386 aa6.2□□□□□ -1.42
GPHN-216ENST00000557678 CHRNA4P43681 627 aa6.2□□□□□ -1.42
GPHN-216ENST00000557678 TYRO3Q06418 890 aa6.2□□□□□ -1.42
GPHN-216ENST00000557678 USP17L24Q0WX57 530 aa6.2□□□□□ -1.42
GPHN-216ENST00000557678 BTLAQ7Z6A9 289 aa6.2□□□□□ -1.42
GPHN-216ENST00000557678 A6NJR5 290 aa6.19□□□□□ -1.42
GPHN-216ENST00000557678 ADARB2-AS1A8MUL3 147 aa6.19□□□□□ -1.42
GPHN-216ENST00000557678 DKK1O94907 266 aa6.19□□□□□ -1.42
GPHN-216ENST00000557678 SPATA31C1P0DKV0 1188 aa6.19□□□□□ -1.42
GPHN-216ENST00000557678 PTK7Q13308 1070 aa6.19□□□□□ -1.42
GPHN-216ENST00000557678 CDCA8Q53HL2 280 aa6.19□□□□□ -1.42
GPHN-216ENST00000557678 C8orf86Q6ZUL3 223 aa6.19□□□□□ -1.42
GPHN-216ENST00000557678 ANKMY2Q8IV38 441 aa6.19□□□□□ -1.42
GPHN-216ENST00000557678 TNFRSF25Q93038 417 aa6.19□□□□□ -1.42
GPHN-216ENST00000557678 ZNF777Q9ULD5 760 aaPredicted RBP6.19□□□□□ -1.42
GPHN-216ENST00000557678 FAM229AH3BQW9 127 aa6.18□□□□□ -1.42
GPHN-216ENST00000557678 APBA3O96018 575 aa6.18□□□□□ -1.42
GPHN-216ENST00000557678 RFX1P22670 979 aa6.18□□□□□ -1.42
GPHN-216ENST00000557678 TRIM28Q13263 835 aaKnown RBP6.18□□□□□ -1.42
GPHN-216ENST00000557678 DOC2BQ14184 412 aa6.18□□□□□ -1.42
GPHN-216ENST00000557678 KANK4Q5T7N3 995 aaPredicted RBP6.18□□□□□ -1.42
GPHN-216ENST00000557678 STAG2Q8N3U4 1231 aa6.18□□□□□ -1.42
GPHN-216ENST00000557678 FAM196BA6NMK8 535 aa6.17□□□□□ -1.42
GPHN-216ENST00000557678 ALBP02768 609 aa6.17□□□□□ -1.42
GPHN-216ENST00000557678 GATA4P43694 442 aa6.17□□□□□ -1.42
GPHN-216ENST00000557678 RTN1Q16799 776 aa6.17□□□□□ -1.42
GPHN-216ENST00000557678 TRAPPC3LQ5T215 181 aa6.17□□□□□ -1.42
GPHN-216ENST00000557678 MICALL1Q8N3F8 863 aa6.17□□□□□ -1.42
GPHN-216ENST00000557678 LILRB5O75023 590 aa6.16□□□□□ -1.42
GPHN-216ENST00000557678 EPB42P16452 691 aa6.16□□□□□ -1.42
GPHN-216ENST00000557678 IGFBP4P22692 258 aa6.16□□□□□ -1.42
GPHN-216ENST00000557678 KCNQ4P56696 695 aa6.16□□□□□ -1.42
GPHN-216ENST00000557678 POTEAQ6S8J7 498 aa6.16□□□□□ -1.42
GPHN-216ENST00000557678 FAM200AQ8TCP9 573 aa6.16□□□□□ -1.42
GPHN-216ENST00000557678 NUDT8Q8WV74 236 aa6.16□□□□□ -1.42
GPHN-216ENST00000557678 JPH1Q9HDC5 661 aaPredicted RBP6.16□□□□□ -1.42
GPHN-216ENST00000557678 KLK14Q9P0G3 267 aa6.16□□□□□ -1.42
GPHN-216ENST00000557678 TGFBR3LH3BV60 316 aa6.15□□□□□ -1.42
GPHN-216ENST00000557678 NFKB1P19838 968 aa6.15□□□□□ -1.42
GPHN-216ENST00000557678 DGKZQ13574 1117 aa6.15□□□□□ -1.42
GPHN-216ENST00000557678 CCINQ13939 588 aa6.15□□□□□ -1.42
GPHN-216ENST00000557678 KRT25Q7Z3Z0 450 aa6.15□□□□□ -1.42
GPHN-216ENST00000557678 SLC6A14Q9UN76 642 aa6.15□□□□□ -1.42
GPHN-216ENST00000557678 STARD13Q9Y3M8 1113 aa6.15□□□□□ -1.42
GPHN-216ENST00000557678 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.15□□□□□ -1.42
GPHN-216ENST00000557678 IDH3AP50213 366 aa6.14□□□□□ -1.43
GPHN-216ENST00000557678 MDFIQ99750 246 aa6.14□□□□□ -1.43
GPHN-216ENST00000557678 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.14□□□□□ -1.43
GPHN-216ENST00000557678 DNAJB12Q9NXW2 375 aaKnown RBP6.14□□□□□ -1.43
GPHN-216ENST00000557678 GRIK4Q16099 956 aa6.13□□□□□ -1.43
GPHN-216ENST00000557678 IER5Q5VY09 327 aa6.13□□□□□ -1.43
GPHN-216ENST00000557678 PSAPL1Q6NUJ1 521 aa6.13□□□□□ -1.43
GPHN-216ENST00000557678 NACC1Q96RE7 527 aa6.13□□□□□ -1.43
GPHN-216ENST00000557678 GSX2Q9BZM3 304 aa6.13□□□□□ -1.43
GPHN-216ENST00000557678 SEMA6BQ9H3T3 888 aa6.13□□□□□ -1.43
GPHN-216ENST00000557678 FOXO3O43524 673 aa6.12□□□□□ -1.43
GPHN-216ENST00000557678 RGS9O75916 674 aaPredicted RBP6.12□□□□□ -1.43
GPHN-216ENST00000557678 CFAP70Q5T0N1 1121 aa6.12□□□□□ -1.43
GPHN-216ENST00000557678 PRDM6Q9NQX0 595 aa6.12□□□□□ -1.43
GPHN-216ENST00000557678 BCS1LQ9Y276 419 aa6.12□□□□□ -1.43
GPHN-216ENST00000557678 NID1P14543 1247 aa6.11□□□□□ -1.43
GPHN-216ENST00000557678 CPB1P15086 417 aa6.11□□□□□ -1.43
GPHN-216ENST00000557678 ARSDP51689 593 aa6.11□□□□□ -1.43
GPHN-216ENST00000557678 RAC1P63000 192 aa6.11□□□□□ -1.43
GPHN-216ENST00000557678 MLLT1Q03111 559 aaPredicted RBP6.11□□□□□ -1.43
GPHN-216ENST00000557678 C11orf91Q3C1V1 193 aa6.11□□□□□ -1.43
GPHN-216ENST00000557678 FOXD4L6Q3SYB3 417 aaPredicted RBP6.11□□□□□ -1.43
GPHN-216ENST00000557678 FOXD4L3Q6VB84 417 aaPredicted RBP6.11□□□□□ -1.43
GPHN-216ENST00000557678 FAM35AQ86V20 835 aa6.11□□□□□ -1.43
GPHN-216ENST00000557678 KRTAP19-1Q8IUB9 90 aa6.11□□□□□ -1.43
GPHN-216ENST00000557678 ARXQ96QS3 562 aa6.11□□□□□ -1.43
GPHN-216ENST00000557678 EFCC1Q9HA90 598 aa6.11□□□□□ -1.43
GPHN-216ENST00000557678 NOVA2Q9UNW9 492 aaKnown RBP6.11□□□□□ -1.43
GPHN-216ENST00000557678 KRTAP4-8A0A0G2JLE6 195 aa6.1□□□□□ -1.43
GPHN-216ENST00000557678 PRMT3O60678 531 aa6.1□□□□□ -1.43
GPHN-216ENST00000557678 MICAL2O94851 1124 aa6.1□□□□□ -1.43
GPHN-216ENST00000557678 RARAP10276 462 aa6.1□□□□□ -1.43
GPHN-216ENST00000557678 WEE1P30291 646 aa6.1□□□□□ -1.43
GPHN-216ENST00000557678 COL9A3Q14050 684 aaPredicted RBP6.1□□□□□ -1.43
GPHN-216ENST00000557678 PCSK7Q16549 785 aa6.1□□□□□ -1.43
GPHN-216ENST00000557678 C20orf204Q6ZNR8 217 aa6.1□□□□□ -1.43
GPHN-216ENST00000557678 DMRTC2Q8IXT2 367 aaPredicted RBP6.1□□□□□ -1.43
GPHN-216ENST00000557678 CMTR1Q8N1G2 835 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms