RNA–Protein interactions for RNA: ENST00000557493.1

TGFB3-207, Transcript of transforming growth factor beta 3, humanhuman

TSL 4

Gene TGFB3, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-207ENST00000557493 PIM2Q9P1W9 311 aa13.34□□□□□ -0.27
TGFB3-207ENST00000557493 PARP3Q9Y6F1 533 aa13.34□□□□□ -0.27
TGFB3-207ENST00000557493 ATP6V1AP38606 617 aa13.33□□□□□ -0.28
TGFB3-207ENST00000557493 DALRD3Q5D0E6 543 aaKnown RBP13.33□□□□□ -0.28
TGFB3-207ENST00000557493 TRAPPC3LQ5T215 181 aa13.33□□□□□ -0.28
TGFB3-207ENST00000557493 LRP10Q7Z4F1 713 aa13.33□□□□□ -0.28
TGFB3-207ENST00000557493 RWDD1Q9H446 243 aaPredicted RBP13.33□□□□□ -0.28
TGFB3-207ENST00000557493 MAP3K2Q9Y2U5 619 aa13.33□□□□□ -0.28
TGFB3-207ENST00000557493 RTCBQ9Y3I0 505 aaKnown RBP13.33□□□□□ -0.28
TGFB3-207ENST00000557493 KIF13BQ9NQT8 1826 aa13.33□□□□□ -0.28
TGFB3-207ENST00000557493 ALDH1L1O75891 902 aa13.32□□□□□ -0.28
TGFB3-207ENST00000557493 GNAI3P08754 354 aa13.32□□□□□ -0.28
TGFB3-207ENST00000557493 NEXNQ0ZGT2 675 aa13.32□□□□□ -0.28
TGFB3-207ENST00000557493 AIMP1Q12904 312 aaKnown RBP13.32□□□□□ -0.28
TGFB3-207ENST00000557493 COPS6Q7L5N1 327 aa13.32□□□□□ -0.28
TGFB3-207ENST00000557493 RIC3Q7Z5B4 369 aa13.32□□□□□ -0.28
TGFB3-207ENST00000557493 PCDHB15Q9Y5E8 787 aa13.32□□□□□ -0.28
TGFB3-207ENST00000557493 ZC3H4Q9UPT8 1303 aaKnown RBP13.32□□□□□ -0.28
TGFB3-207ENST00000557493 NBPF26B4DH59 902 aa13.31□□□□□ -0.28
TGFB3-207ENST00000557493 A1BGP04217 495 aa13.31□□□□□ -0.28
TGFB3-207ENST00000557493 CYP19A1P11511 503 aaPredicted RBP13.31□□□□□ -0.28
TGFB3-207ENST00000557493 KCNA3P22001 575 aa13.31□□□□□ -0.28
TGFB3-207ENST00000557493 HDAC1Q13547 482 aaPredicted RBP13.31□□□□□ -0.28
TGFB3-207ENST00000557493 BEND3Q5T5X7 828 aa13.31□□□□□ -0.28
TGFB3-207ENST00000557493 NBPF10Q6P3W6 841 aaKnown RBP13.31□□□□□ -0.28
TGFB3-207ENST00000557493 NBPF15Q8N660 670 aa13.31□□□□□ -0.28
TGFB3-207ENST00000557493 PLBD2Q8NHP8 589 aa13.31□□□□□ -0.28
TGFB3-207ENST00000557493 TNRC6CQ9HCJ0 1690 aaKnown RBP13.31□□□□□ -0.28
TGFB3-207ENST00000557493 AFDNP55196 1824 aaKnown RBP13.3□□□□□ -0.28
TGFB3-207ENST00000557493 VEGFAP15692 232 aaPredicted RBP13.3□□□□□ -0.28
TGFB3-207ENST00000557493 PIP4K2AP48426 406 aaPredicted RBP13.3□□□□□ -0.28
TGFB3-207ENST00000557493 KIF6Q6ZMV9 814 aa13.3□□□□□ -0.28
TGFB3-207ENST00000557493 ANKRD13DQ6ZTN6 518 aa13.3□□□□□ -0.28
TGFB3-207ENST00000557493 LINS1Q8NG48 757 aa13.3□□□□□ -0.28
TGFB3-207ENST00000557493 SLC4A9Q96Q91 983 aa13.3□□□□□ -0.28
TGFB3-207ENST00000557493 MEIS3Q99687 375 aa13.3□□□□□ -0.28
TGFB3-207ENST00000557493 HDAC5Q9UQL6 1122 aa13.3□□□□□ -0.28
TGFB3-207ENST00000557493 GNAI2P04899 355 aa13.29□□□□□ -0.28
TGFB3-207ENST00000557493 GYS1P13807 737 aa13.29□□□□□ -0.28
TGFB3-207ENST00000557493 RFC4P35249 363 aa13.29□□□□□ -0.28
TGFB3-207ENST00000557493 NPM2Q86SE8 214 aaKnown RBP13.29□□□□□ -0.28
TGFB3-207ENST00000557493 ARHGEF1Q92888 912 aaKnown RBP13.29□□□□□ -0.28
TGFB3-207ENST00000557493 METTL22Q9BUU2 404 aaPredicted RBP13.29□□□□□ -0.28
TGFB3-207ENST00000557493 C4AP0C0L4 1744 aa13.28□□□□□ -0.28
TGFB3-207ENST00000557493 UBTFL1P0CB47 393 aaPredicted RBP13.28□□□□□ -0.28
TGFB3-207ENST00000557493 IL6STP40189 918 aaPredicted RBP13.28□□□□□ -0.28
TGFB3-207ENST00000557493 RPAP2Q8IXW5 612 aaPredicted RBP13.28□□□□□ -0.28
TGFB3-207ENST00000557493 C1orf115Q9H7X2 142 aa13.28□□□□□ -0.28
TGFB3-207ENST00000557493 PCDH10Q9P2E7 1040 aa13.28□□□□□ -0.28
TGFB3-207ENST00000557493 ANKRD36CQ5JPF3 1778 aa13.27□□□□□ -0.28
TGFB3-207ENST00000557493 IGHDP01880 384 aa13.27□□□□□ -0.29
TGFB3-207ENST00000557493 CNKSR2Q8WXI2 1034 aa13.27□□□□□ -0.29
TGFB3-207ENST00000557493 MYD88Q99836 296 aa13.27□□□□□ -0.29
TGFB3-207ENST00000557493 ZBTB1Q9Y2K1 713 aa13.27□□□□□ -0.29
TGFB3-207ENST00000557493 GLTPD2A6NH11 291 aa13.26□□□□□ -0.29
TGFB3-207ENST00000557493 HMMRO75330 724 aa13.26□□□□□ -0.29
TGFB3-207ENST00000557493 CRKLP46109 303 aaKnown RBP13.26□□□□□ -0.29
TGFB3-207ENST00000557493 RC3H1Q5TC82 1133 aaKnown RBP13.26□□□□□ -0.29
TGFB3-207ENST00000557493 CEP85Q6P2H3 762 aa13.26□□□□□ -0.29
TGFB3-207ENST00000557493 TTLL7Q6ZT98 887 aa13.26□□□□□ -0.29
TGFB3-207ENST00000557493 ANKRD44Q8N8A2 993 aa13.26□□□□□ -0.29
TGFB3-207ENST00000557493 CNTNAP4Q9C0A0 1308 aa13.26□□□□□ -0.29
TGFB3-207ENST00000557493 USP44Q9H0E7 712 aa13.26□□□□□ -0.29
TGFB3-207ENST00000557493 PRDM10Q9NQV6 1147 aa13.26□□□□□ -0.29
TGFB3-207ENST00000557493 ZNF330Q9Y3S2 320 aaPredicted RBP13.26□□□□□ -0.29
TGFB3-207ENST00000557493 ARFGEF1Q9Y6D6 1849 aa13.26□□□□□ -0.29
TGFB3-207ENST00000557493 BRCA1P38398 1863 aaKnown RBP13.25□□□□□ -0.29
TGFB3-207ENST00000557493 BCORQ6W2J9 1755 aa13.25□□□□□ -0.29
TGFB3-207ENST00000557493 MAP3K15Q6ZN16 1313 aa13.25□□□□□ -0.29
TGFB3-207ENST00000557493 NEURL1BA8MQ27 555 aa13.25□□□□□ -0.29
TGFB3-207ENST00000557493 RPS6KA4O75676 772 aa13.25□□□□□ -0.29
TGFB3-207ENST00000557493 HSP90AB3PQ58FF7 597 aa13.25□□□□□ -0.29
TGFB3-207ENST00000557493 GCC1Q96CN9 775 aa13.25□□□□□ -0.29
TGFB3-207ENST00000557493 C9orf78Q9NZ63 289 aaPredicted RBP13.25□□□□□ -0.29
TGFB3-207ENST00000557493 UTYO14607 1347 aa13.24□□□□□ -0.29
TGFB3-207ENST00000557493 GRM8O00222 908 aa13.24□□□□□ -0.29
TGFB3-207ENST00000557493 IGKV5-2P06315 115 aa13.24□□□□□ -0.29
TGFB3-207ENST00000557493 LMNB1P20700 586 aa13.24□□□□□ -0.29
TGFB3-207ENST00000557493 CHRNA5P30532 468 aa13.24□□□□□ -0.29
TGFB3-207ENST00000557493 RASSF7Q02833 373 aa13.24□□□□□ -0.29
TGFB3-207ENST00000557493 CWF19L2Q2TBE0 894 aaKnown RBP13.24□□□□□ -0.29
TGFB3-207ENST00000557493 INTS5Q6P9B9 1019 aaKnown RBP13.24□□□□□ -0.29
TGFB3-207ENST00000557493 ZBTB3Q9H5J0 574 aa13.24□□□□□ -0.29
TGFB3-207ENST00000557493 CREBZFQ9NS37 354 aa13.24□□□□□ -0.29
TGFB3-207ENST00000557493 SCN7AQ01118 1682 aa13.24□□□□□ -0.29
TGFB3-207ENST00000557493 MYH14Q7Z406 1995 aaKnown RBP13.23□□□□□ -0.29
TGFB3-207ENST00000557493 COL15A1P39059 1388 aa13.23□□□□□ -0.29
TGFB3-207ENST00000557493 A0A087WZG4 1122 aa13.23□□□□□ -0.29
TGFB3-207ENST00000557493 FOXN1O15353 648 aa13.23□□□□□ -0.29
TGFB3-207ENST00000557493 EIF5P55010 431 aaKnown RBP13.23□□□□□ -0.29
TGFB3-207ENST00000557493 GCKRQ14397 625 aa13.23□□□□□ -0.29
TGFB3-207ENST00000557493 SMC5Q8IY18 1101 aa13.23□□□□□ -0.29
TGFB3-207ENST00000557493 AIDAQ96BJ3 306 aa13.23□□□□□ -0.29
TGFB3-207ENST00000557493 MKRN1Q9UHC7 482 aaKnown RBP13.23□□□□□ -0.29
TGFB3-207ENST00000557493 LRRFIP2Q9Y608 721 aaKnown RBP13.23□□□□□ -0.29
TGFB3-207ENST00000557493 ERVV-1B6SEH8 477 aa13.22□□□□□ -0.29
TGFB3-207ENST00000557493 CTCFP49711 727 aaPredicted RBP13.22□□□□□ -0.29
TGFB3-207ENST00000557493 MAPK8IP2Q13387 824 aaPredicted RBP13.22□□□□□ -0.29
TGFB3-207ENST00000557493 DZIP3Q86Y13 1208 aaKnown RBP13.22□□□□□ -0.29
TGFB3-207ENST00000557493 CCDC191Q8NCU4 936 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms