RNA–Protein interactions for RNA: ENST00000557488.1

ITGA7-219, Transcript of integrin subunit alpha 7, humanhuman

TSL 3

Gene ITGA7, Length 296 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-219ENST00000557488 BCS1LQ9Y276 419 aa18.53■□□□□ 0.56
ITGA7-219ENST00000557488 SLX4Q8IY92 1834 aa18.52■□□□□ 0.56
ITGA7-219ENST00000557488 HCLS1P14317 486 aaPredicted RBP18.52■□□□□ 0.56
ITGA7-219ENST00000557488 PARP10Q53GL7 1025 aa18.52■□□□□ 0.56
ITGA7-219ENST00000557488 HSP90AB3PQ58FF7 597 aa18.52■□□□□ 0.56
ITGA7-219ENST00000557488 FAM89AQ96GI7 184 aa18.52■□□□□ 0.56
ITGA7-219ENST00000557488 DLEC1Q9Y238 1755 aa18.52■□□□□ 0.55
ITGA7-219ENST00000557488 TAF1P21675 1872 aa18.52■□□□□ 0.55
ITGA7-219ENST00000557488 CACNA1SQ13698 1873 aa18.52■□□□□ 0.55
ITGA7-219ENST00000557488 KLRG2A4D1S0 409 aaPredicted RBP18.51■□□□□ 0.55
ITGA7-219ENST00000557488 H0YIN7 160 aa18.51■□□□□ 0.55
ITGA7-219ENST00000557488 NPHP1O15259 732 aa18.51■□□□□ 0.55
ITGA7-219ENST00000557488 SRGNP10124 158 aa18.51■□□□□ 0.55
ITGA7-219ENST00000557488 GTF2E1P29083 439 aaPredicted RBP18.51■□□□□ 0.55
ITGA7-219ENST00000557488 ST5P78524 1137 aa18.51■□□□□ 0.55
ITGA7-219ENST00000557488 TRIM28Q13263 835 aaKnown RBP18.51■□□□□ 0.55
ITGA7-219ENST00000557488 CWF19L2Q2TBE0 894 aaKnown RBP18.51■□□□□ 0.55
ITGA7-219ENST00000557488 SLC10A5Q5PT55 438 aa18.51■□□□□ 0.55
ITGA7-219ENST00000557488 ZNF622Q969S3 477 aaKnown RBP eCLIP18.51■□□□□ 0.55
ITGA7-219ENST00000557488 PIM2Q9P1W9 311 aa18.51■□□□□ 0.55
ITGA7-219ENST00000557488 PDE6BP35913 854 aa18.5■□□□□ 0.55
ITGA7-219ENST00000557488 FKBP5Q13451 457 aaPredicted RBP18.5■□□□□ 0.55
ITGA7-219ENST00000557488 PPP1R42Q7Z4L9 355 aa18.5■□□□□ 0.55
ITGA7-219ENST00000557488 TRMT112Q9UI30 125 aaKnown RBP18.5■□□□□ 0.55
ITGA7-219ENST00000557488 LAMB2P55268 1798 aa18.5■□□□□ 0.55
ITGA7-219ENST00000557488 ZBED9Q6R2W3 1325 aa18.49■□□□□ 0.55
ITGA7-219ENST00000557488 CHMP4AQ9BY43 222 aa18.49■□□□□ 0.55
ITGA7-219ENST00000557488 NYXQ9GZU5 481 aa18.49■□□□□ 0.55
ITGA7-219ENST00000557488 ZNF219Q9P2Y4 722 aaPredicted RBP18.49■□□□□ 0.55
ITGA7-219ENST00000557488 DDX58O95786 925 aaKnown RBP18.48■□□□□ 0.55
ITGA7-219ENST00000557488 DNAAF4Q8WXU2 420 aa18.48■□□□□ 0.55
ITGA7-219ENST00000557488 DDX60Q8IY21 1712 aaKnown RBP18.48■□□□□ 0.55
ITGA7-219ENST00000557488 IBTKQ9P2D0 1353 aaPredicted RBP18.47■□□□□ 0.55
ITGA7-219ENST00000557488 NEURL1BA8MQ27 555 aa18.47■□□□□ 0.55
ITGA7-219ENST00000557488 RARSP54136 660 aaKnown RBP18.47■□□□□ 0.55
ITGA7-219ENST00000557488 DALRD3Q5D0E6 543 aaKnown RBP18.47■□□□□ 0.55
ITGA7-219ENST00000557488 OLFM4Q6UX06 510 aa18.47■□□□□ 0.55
ITGA7-219ENST00000557488 COL4A1P02462 1669 aa18.47■□□□□ 0.55
ITGA7-219ENST00000557488 ARFGEF1Q9Y6D6 1849 aa18.46■□□□□ 0.55
ITGA7-219ENST00000557488 BCAR3O75815 825 aa18.46■□□□□ 0.55
ITGA7-219ENST00000557488 CRY2Q49AN0 593 aa18.46■□□□□ 0.55
ITGA7-219ENST00000557488 BEND3Q5T5X7 828 aa18.46■□□□□ 0.55
ITGA7-219ENST00000557488 TNNQ9UQP3 1299 aa18.46■□□□□ 0.55
ITGA7-219ENST00000557488 STYK1Q6J9G0 422 aa18.45■□□□□ 0.54
ITGA7-219ENST00000557488 TTLL6Q8N841 843 aa18.45■□□□□ 0.54
ITGA7-219ENST00000557488 CCDC191Q8NCU4 936 aa18.45■□□□□ 0.54
ITGA7-219ENST00000557488 MASTLQ96GX5 879 aa18.45■□□□□ 0.54
ITGA7-219ENST00000557488 SH3TC1Q8TE82 1336 aa18.45■□□□□ 0.54
ITGA7-219ENST00000557488 PRELPP51888 382 aa18.44■□□□□ 0.54
ITGA7-219ENST00000557488 ALDH1L2Q3SY69 923 aa18.44■□□□□ 0.54
ITGA7-219ENST00000557488 ARHGAP27Q6ZUM4 889 aa18.44■□□□□ 0.54
ITGA7-219ENST00000557488 C7orf43Q8WVR3 580 aa18.44■□□□□ 0.54
ITGA7-219ENST00000557488 SMC4Q9NTJ3 1288 aa18.44■□□□□ 0.54
ITGA7-219ENST00000557488 CWC25Q9NXE8 425 aaPredicted RBP18.44■□□□□ 0.54
ITGA7-219ENST00000557488 NOB1Q9ULX3 412 aaKnown RBP18.44■□□□□ 0.54
ITGA7-219ENST00000557488 CHD4Q14839 1912 aa18.43■□□□□ 0.54
ITGA7-219ENST00000557488 DCAF8L1A6NGE4 600 aa18.43■□□□□ 0.54
ITGA7-219ENST00000557488 H7C1W4 665 aa18.43■□□□□ 0.54
ITGA7-219ENST00000557488 IRS4O14654 1257 aaPredicted RBP18.43■□□□□ 0.54
ITGA7-219ENST00000557488 C21orf2O43822 256 aa18.43■□□□□ 0.54
ITGA7-219ENST00000557488 PCCAP05165 728 aaPredicted RBP18.43■□□□□ 0.54
ITGA7-219ENST00000557488 NPR1P16066 1061 aa18.43■□□□□ 0.54
ITGA7-219ENST00000557488 CASP7P55210 303 aa18.43■□□□□ 0.54
ITGA7-219ENST00000557488 ZBTB38Q8NAP3 1195 aaPredicted RBP18.43■□□□□ 0.54
ITGA7-219ENST00000557488 NLRP3Q96P20 1036 aa18.43■□□□□ 0.54
ITGA7-219ENST00000557488 CCDC88AQ3V6T2 1871 aa18.42■□□□□ 0.54
ITGA7-219ENST00000557488 GCKRQ14397 625 aa18.42■□□□□ 0.54
ITGA7-219ENST00000557488 PRPF40BQ6NWY9 871 aaKnown RBP18.42■□□□□ 0.54
ITGA7-219ENST00000557488 SLC4A10Q6U841 1118 aa18.42■□□□□ 0.54
ITGA7-219ENST00000557488 SBF1O95248 1867 aa18.41■□□□□ 0.54
ITGA7-219ENST00000557488 GRIN3BO60391 1043 aa18.41■□□□□ 0.54
ITGA7-219ENST00000557488 HOXA10P31260 410 aaPredicted RBP18.41■□□□□ 0.54
ITGA7-219ENST00000557488 LINS1Q8NG48 757 aa18.41■□□□□ 0.54
ITGA7-219ENST00000557488 YTHDC1Q96MU7 727 aaKnown RBP18.41■□□□□ 0.54
ITGA7-219ENST00000557488 CCDC85AQ96PX6 553 aaPredicted RBP18.41■□□□□ 0.54
ITGA7-219ENST00000557488 RIC1Q4ADV7 1423 aa18.4■□□□□ 0.54
ITGA7-219ENST00000557488 CT47B1P0C2W7 299 aaPredicted RBP18.4■□□□□ 0.54
ITGA7-219ENST00000557488 RASSF7Q02833 373 aa18.4■□□□□ 0.54
ITGA7-219ENST00000557488 NEXNQ0ZGT2 675 aa18.4■□□□□ 0.54
ITGA7-219ENST00000557488 CNKSR1Q969H4 720 aa18.4■□□□□ 0.54
ITGA7-219ENST00000557488 PDZRN3Q9UPQ7 1066 aa18.4■□□□□ 0.54
ITGA7-219ENST00000557488 SF3B3Q15393 1217 aaKnown RBP18.39■□□□□ 0.53
ITGA7-219ENST00000557488 UBE3BQ7Z3V4 1068 aa18.39■□□□□ 0.53
ITGA7-219ENST00000557488 SEC31BQ9NQW1 1179 aa18.39■□□□□ 0.53
ITGA7-219ENST00000557488 NFKBIEO00221 500 aa18.38■□□□□ 0.53
ITGA7-219ENST00000557488 BRPF1P55201 1214 aaPredicted RBP18.38■□□□□ 0.53
ITGA7-219ENST00000557488 EPHA10Q5JZY3 1008 aa18.38■□□□□ 0.53
ITGA7-219ENST00000557488 RPGRQ92834 1020 aaKnown RBP18.38■□□□□ 0.53
ITGA7-219ENST00000557488 CRAMP1Q96RY5 1269 aa18.38■□□□□ 0.53
ITGA7-219ENST00000557488 RNF123Q5XPI4 1314 aa18.38■□□□□ 0.53
ITGA7-219ENST00000557488 FER1L6Q2WGJ9 1857 aa18.37■□□□□ 0.53
ITGA7-219ENST00000557488 CELF1Q92879 486 aaKnown RBP18.37■□□□□ 0.53
ITGA7-219ENST00000557488 ABCC4O15439 1325 aa18.37■□□□□ 0.53
ITGA7-219ENST00000557488 GOLGB1Q14789 3259 aaKnown RBP18.37■□□□□ 0.53
ITGA7-219ENST00000557488 PDE8AO60658 829 aa18.36■□□□□ 0.53
ITGA7-219ENST00000557488 PTPRCP08575 1304 aa18.36■□□□□ 0.53
ITGA7-219ENST00000557488 ALDH1B1P30837 517 aa18.36■□□□□ 0.53
ITGA7-219ENST00000557488 RBM17Q96I25 401 aaKnown RBP18.36■□□□□ 0.53
ITGA7-219ENST00000557488 KAZALD1Q96I82 304 aa18.36■□□□□ 0.53
ITGA7-219ENST00000557488 CDHR2Q9BYE9 1310 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms