RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 PDE3BQ13370 1112 aa7.82□□□□□ -1.16
PRPF39-212ENST00000557477 GGNBP2Q9H3C7 697 aa7.82□□□□□ -1.16
PRPF39-212ENST00000557477 THBS1P07996 1170 aa7.81□□□□□ -1.16
PRPF39-212ENST00000557477 USP5P45974 858 aa7.81□□□□□ -1.16
PRPF39-212ENST00000557477 ARSDP51689 593 aa7.81□□□□□ -1.16
PRPF39-212ENST00000557477 PTSQ03393 145 aa7.81□□□□□ -1.16
PRPF39-212ENST00000557477 EHHADHQ08426 723 aa7.81□□□□□ -1.16
PRPF39-212ENST00000557477 COL19A1Q14993 1142 aa7.81□□□□□ -1.16
PRPF39-212ENST00000557477 TRIP4Q15650 581 aaPredicted RBP7.81□□□□□ -1.16
PRPF39-212ENST00000557477 EAPPQ56P03 285 aaPredicted RBP7.81□□□□□ -1.16
PRPF39-212ENST00000557477 GJA3Q9Y6H8 435 aa7.81□□□□□ -1.16
PRPF39-212ENST00000557477 C8orf34Q49A92 452 aa7.8□□□□□ -1.16
PRPF39-212ENST00000557477 PGBD3Q8N328 593 aa7.8□□□□□ -1.16
PRPF39-212ENST00000557477 PIK3R5Q8WYR1 880 aa7.8□□□□□ -1.16
PRPF39-212ENST00000557477 ALKBH8Q96BT7 664 aaKnown RBP7.8□□□□□ -1.16
PRPF39-212ENST00000557477 CEP63Q96MT8 703 aa7.8□□□□□ -1.16
PRPF39-212ENST00000557477 NIF3L1Q9GZT8 377 aa7.8□□□□□ -1.16
PRPF39-212ENST00000557477 FAM13BQ9NYF5 915 aa7.8□□□□□ -1.16
PRPF39-212ENST00000557477 KIAA1522Q9P206 1035 aaPredicted RBP7.8□□□□□ -1.16
PRPF39-212ENST00000557477 RTCBQ9Y3I0 505 aaKnown RBP7.8□□□□□ -1.16
PRPF39-212ENST00000557477 SLC35F4A4IF30 521 aa7.79□□□□□ -1.16
PRPF39-212ENST00000557477 E9PSI1 815 aa7.79□□□□□ -1.16
PRPF39-212ENST00000557477 PCSK2P16519 638 aa7.79□□□□□ -1.16
PRPF39-212ENST00000557477 MAPK8P45983 427 aa7.79□□□□□ -1.16
PRPF39-212ENST00000557477 PLCB3Q01970 1234 aa7.79□□□□□ -1.16
PRPF39-212ENST00000557477 RIPOR1Q6ZS17 1223 aa7.79□□□□□ -1.16
PRPF39-212ENST00000557477 CMTR1Q8N1G2 835 aaKnown RBP7.79□□□□□ -1.16
PRPF39-212ENST00000557477 SETDB2Q96T68 719 aa7.79□□□□□ -1.16
PRPF39-212ENST00000557477 KCNMB2Q9Y691 235 aa7.79□□□□□ -1.16
PRPF39-212ENST00000557477 ORC1Q13415 861 aa7.78□□□□□ -1.16
PRPF39-212ENST00000557477 ZNF326Q5BKZ1 582 aaKnown RBP7.78□□□□□ -1.16
PRPF39-212ENST00000557477 NLRP8Q86W28 1048 aa7.78□□□□□ -1.16
PRPF39-212ENST00000557477 MRRFQ96E11 262 aaKnown RBP7.78□□□□□ -1.16
PRPF39-212ENST00000557477 ZCCHC2Q9C0B9 1178 aaKnown RBP7.78□□□□□ -1.16
PRPF39-212ENST00000557477 CUEDC1Q9NWM3 386 aaPredicted RBP7.78□□□□□ -1.16
PRPF39-212ENST00000557477 UBAP2LQ14157 1087 aaKnown RBP7.77□□□□□ -1.17
PRPF39-212ENST00000557477 EFHC2Q5JST6 749 aa7.77□□□□□ -1.17
PRPF39-212ENST00000557477 SAMD5Q5TGI4 173 aa7.77□□□□□ -1.17
PRPF39-212ENST00000557477 CCDC155Q8N6L0 562 aa7.77□□□□□ -1.17
PRPF39-212ENST00000557477 ZNF775Q96BV0 537 aaPredicted RBP7.77□□□□□ -1.17
PRPF39-212ENST00000557477 BRD7Q9NPI1 651 aa7.77□□□□□ -1.17
PRPF39-212ENST00000557477 WWC3Q9ULE0 1092 aa7.77□□□□□ -1.17
PRPF39-212ENST00000557477 PNMA6FA0A0J9YX94 578 aa7.76□□□□□ -1.17
PRPF39-212ENST00000557477 UBAP1LF5GYI3 381 aa7.76□□□□□ -1.17
PRPF39-212ENST00000557477 RPLP1P05386 114 aaKnown RBP7.76□□□□□ -1.17
PRPF39-212ENST00000557477 LDHBP07195 334 aaKnown RBP7.76□□□□□ -1.17
PRPF39-212ENST00000557477 ENOX2Q16206 610 aaKnown RBP7.76□□□□□ -1.17
PRPF39-212ENST00000557477 TTC16Q8NEE8 873 aa7.76□□□□□ -1.17
PRPF39-212ENST00000557477 RNF19AQ9NV58 838 aa7.76□□□□□ -1.17
PRPF39-212ENST00000557477 DCDC2BA2VCK2 349 aa7.75□□□□□ -1.17
PRPF39-212ENST00000557477 EPB42P16452 691 aa7.75□□□□□ -1.17
PRPF39-212ENST00000557477 DBN1Q16643 649 aa7.75□□□□□ -1.17
PRPF39-212ENST00000557477 NUCKS1Q9H1E3 243 aaKnown RBP7.75□□□□□ -1.17
PRPF39-212ENST00000557477 FOXD3Q9UJU5 478 aaPredicted RBP7.75□□□□□ -1.17
PRPF39-212ENST00000557477 HCN2Q9UL51 889 aa7.75□□□□□ -1.17
PRPF39-212ENST00000557477 ATXN7O15265 892 aaPredicted RBP7.74□□□□□ -1.17
PRPF39-212ENST00000557477 XYLBO75191 536 aa7.74□□□□□ -1.17
PRPF39-212ENST00000557477 TNFRSF21O75509 655 aa7.74□□□□□ -1.17
PRPF39-212ENST00000557477 FAM157BP0CG42 384 aa7.74□□□□□ -1.17
PRPF39-212ENST00000557477 LBRQ14739 615 aaKnown RBP7.74□□□□□ -1.17
PRPF39-212ENST00000557477 ZNF438Q7Z4V0 828 aa7.74□□□□□ -1.17
PRPF39-212ENST00000557477 CSRNP1Q96S65 589 aa7.74□□□□□ -1.17
PRPF39-212ENST00000557477 TMEM63CQ9P1W3 806 aa7.74□□□□□ -1.17
PRPF39-212ENST00000557477 EIF1AYO14602 144 aaKnown RBP7.73□□□□□ -1.17
PRPF39-212ENST00000557477 KHNYNO15037 678 aaKnown RBP7.73□□□□□ -1.17
PRPF39-212ENST00000557477 EFSO43281 561 aa7.73□□□□□ -1.17
PRPF39-212ENST00000557477 PRPF40AO75400 957 aaKnown RBP7.73□□□□□ -1.17
PRPF39-212ENST00000557477 SFSWAPQ12872 951 aaKnown RBP7.73□□□□□ -1.17
PRPF39-212ENST00000557477 GRIN2CQ14957 1233 aa7.73□□□□□ -1.17
PRPF39-212ENST00000557477 PDE12Q6L8Q7 609 aaKnown RBP7.73□□□□□ -1.17
PRPF39-212ENST00000557477 FIGNL1Q6PIW4 674 aa7.73□□□□□ -1.17
PRPF39-212ENST00000557477 XKR5Q6UX68 686 aa7.73□□□□□ -1.17
PRPF39-212ENST00000557477 TRIM22Q8IYM9 498 aa7.73□□□□□ -1.17
PRPF39-212ENST00000557477 ZNF837Q96EG3 531 aaPredicted RBP7.73□□□□□ -1.17
PRPF39-212ENST00000557477 FAM161BQ96MY7 647 aa7.73□□□□□ -1.17
PRPF39-212ENST00000557477 DUSP9Q99956 384 aaKnown RBP7.73□□□□□ -1.17
PRPF39-212ENST00000557477 CFHR5Q9BXR6 569 aa7.73□□□□□ -1.17
PRPF39-212ENST00000557477 ELP3Q9H9T3 547 aa7.73□□□□□ -1.17
PRPF39-212ENST00000557477 STRN4Q9NRL3 753 aa7.73□□□□□ -1.17
PRPF39-212ENST00000557477 FNDC3AQ9Y2H6 1198 aaKnown RBP7.73□□□□□ -1.17
PRPF39-212ENST00000557477 PCDHGC4Q9Y5F7 938 aa7.73□□□□□ -1.17
PRPF39-212ENST00000557477 ITGA6P23229 1130 aa7.72□□□□□ -1.17
PRPF39-212ENST00000557477 KCNQ4P56696 695 aa7.72□□□□□ -1.17
PRPF39-212ENST00000557477 TNP2Q05952 138 aa7.72□□□□□ -1.17
PRPF39-212ENST00000557477 USPL1Q5W0Q7 1092 aa7.72□□□□□ -1.17
PRPF39-212ENST00000557477 PARP2Q9UGN5 583 aa7.72□□□□□ -1.17
PRPF39-212ENST00000557477 KCNH4Q9UQ05 1017 aa7.72□□□□□ -1.17
PRPF39-212ENST00000557477 H7C1W4 665 aa7.71□□□□□ -1.18
PRPF39-212ENST00000557477 BNIP3LO60238 219 aa7.71□□□□□ -1.18
PRPF39-212ENST00000557477 EGFRP00533 1210 aa7.71□□□□□ -1.18
PRPF39-212ENST00000557477 MAPTP10636 758 aaKnown RBP7.71□□□□□ -1.18
PRPF39-212ENST00000557477 ATP2B2Q01814 1243 aa7.71□□□□□ -1.18
PRPF39-212ENST00000557477 SNX29Q8TEQ0 813 aa7.71□□□□□ -1.18
PRPF39-212ENST00000557477 ABHD17AQ96GS6 310 aa7.71□□□□□ -1.18
PRPF39-212ENST00000557477 CHRDQ9H2X0 955 aa7.71□□□□□ -1.18
PRPF39-212ENST00000557477 NDFIP2Q9NV92 336 aa7.71□□□□□ -1.18
PRPF39-212ENST00000557477 CPNE3O75131 537 aaKnown RBP7.7□□□□□ -1.18
PRPF39-212ENST00000557477 KRT25Q7Z3Z0 450 aa7.7□□□□□ -1.18
PRPF39-212ENST00000557477 NLRP13Q86W25 1043 aa7.7□□□□□ -1.18
PRPF39-212ENST00000557477 GTPBP3Q969Y2 492 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms