RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 TPTE2Q6XPS3 522 aa26.68■■□□□ 1.86
SEC23A-213ENST00000557280 UTP14AQ9BVJ6 771 aaKnown RBP26.68■■□□□ 1.86
SEC23A-213ENST00000557280 A0A0G2JLW4 131 aa26.67■■□□□ 1.86
SEC23A-213ENST00000557280 DPEP1P16444 411 aa26.67■■□□□ 1.86
SEC23A-213ENST00000557280 TRIM28Q13263 835 aaKnown RBP26.67■■□□□ 1.86
SEC23A-213ENST00000557280 PPP1R42Q7Z4L9 355 aa26.67■■□□□ 1.86
SEC23A-213ENST00000557280 NYXQ9GZU5 481 aa26.67■■□□□ 1.86
SEC23A-213ENST00000557280 WWC3Q9ULE0 1092 aa26.67■■□□□ 1.86
SEC23A-213ENST00000557280 NOB1Q9ULX3 412 aaKnown RBP26.66■■□□□ 1.86
SEC23A-213ENST00000557280 PTPRCP08575 1304 aa26.65■■□□□ 1.86
SEC23A-213ENST00000557280 BRPF1P55201 1214 aaPredicted RBP26.65■■□□□ 1.86
SEC23A-213ENST00000557280 BRIP1Q9BX63 1249 aa26.65■■□□□ 1.86
SEC23A-213ENST00000557280 TRMT112Q9UI30 125 aaKnown RBP26.65■■□□□ 1.86
SEC23A-213ENST00000557280 NEURL1BA8MQ27 555 aa26.64■■□□□ 1.86
SEC23A-213ENST00000557280 KCNA3P22001 575 aa26.64■■□□□ 1.86
SEC23A-213ENST00000557280 GTF2E1P29083 439 aaPredicted RBP26.64■■□□□ 1.86
SEC23A-213ENST00000557280 TGFB2P61812 414 aa26.64■■□□□ 1.86
SEC23A-213ENST00000557280 RTL5Q5HYW3 569 aaPredicted RBP26.64■■□□□ 1.86
SEC23A-213ENST00000557280 C3orf67Q6ZVT6 689 aa26.64■■□□□ 1.86
SEC23A-213ENST00000557280 NEXNQ0ZGT2 675 aa26.63■■□□□ 1.85
SEC23A-213ENST00000557280 BEND3Q5T5X7 828 aa26.63■■□□□ 1.85
SEC23A-213ENST00000557280 JARID2Q92833 1246 aaPredicted RBP26.63■■□□□ 1.85
SEC23A-213ENST00000557280 FAM89AQ96GI7 184 aa26.63■■□□□ 1.85
SEC23A-213ENST00000557280 CWC25Q9NXE8 425 aaPredicted RBP26.63■■□□□ 1.85
SEC23A-213ENST00000557280 DLEC1Q9Y238 1755 aa26.62■■□□□ 1.85
SEC23A-213ENST00000557280 C2CD5Q86YS7 1000 aa26.62■■□□□ 1.85
SEC23A-213ENST00000557280 CCDC191Q8NCU4 936 aa26.62■■□□□ 1.85
SEC23A-213ENST00000557280 RIC1Q4ADV7 1423 aa26.62■■□□□ 1.85
SEC23A-213ENST00000557280 SH3TC1Q8TE82 1336 aa26.62■■□□□ 1.85
SEC23A-213ENST00000557280 DDX60Q8IY21 1712 aaKnown RBP26.62■■□□□ 1.85
SEC23A-213ENST00000557280 BRCA1P38398 1863 aaKnown RBP26.62■■□□□ 1.85
SEC23A-213ENST00000557280 SLC4A10Q6U841 1118 aa26.61■■□□□ 1.85
SEC23A-213ENST00000557280 LINS1Q8NG48 757 aa26.61■■□□□ 1.85
SEC23A-213ENST00000557280 RNF123Q5XPI4 1314 aa26.61■■□□□ 1.85
SEC23A-213ENST00000557280 HCLS1P14317 486 aaPredicted RBP26.6■■□□□ 1.85
SEC23A-213ENST00000557280 PDE6BP35913 854 aa26.6■■□□□ 1.85
SEC23A-213ENST00000557280 TNNQ9UQP3 1299 aa26.6■■□□□ 1.85
SEC23A-213ENST00000557280 KIF16BQ96L93 1317 aa26.6■■□□□ 1.85
SEC23A-213ENST00000557280 LAMB2P55268 1798 aa26.58■■□□□ 1.85
SEC23A-213ENST00000557280 KLRG2A4D1S0 409 aaPredicted RBP26.58■■□□□ 1.85
SEC23A-213ENST00000557280 GCKRQ14397 625 aa26.58■■□□□ 1.85
SEC23A-213ENST00000557280 SLC10A5Q5PT55 438 aa26.58■■□□□ 1.85
SEC23A-213ENST00000557280 ZBTB38Q8NAP3 1195 aaPredicted RBP26.58■■□□□ 1.85
SEC23A-213ENST00000557280 PCCAP05165 728 aaPredicted RBP26.57■■□□□ 1.84
SEC23A-213ENST00000557280 FRAT1Q92837 279 aaPredicted RBP26.57■■□□□ 1.84
SEC23A-213ENST00000557280 H0YIN7 160 aa26.56■■□□□ 1.84
SEC23A-213ENST00000557280 SRGNP10124 158 aa26.56■■□□□ 1.84
SEC23A-213ENST00000557280 YBX3P16989 372 aaKnown RBP eCLIP26.56■■□□□ 1.847e-8■□□□□ 8.2
SEC23A-213ENST00000557280 GOLGB1Q14789 3259 aaKnown RBP26.55■■□□□ 1.84
SEC23A-213ENST00000557280 TRIM27P14373 513 aa26.55■■□□□ 1.84
SEC23A-213ENST00000557280 CRY2Q49AN0 593 aa26.55■■□□□ 1.84
SEC23A-213ENST00000557280 PELP1Q8IZL8 1130 aaKnown RBP26.55■■□□□ 1.84
SEC23A-213ENST00000557280 IRS4O14654 1257 aaPredicted RBP26.54■■□□□ 1.84
SEC23A-213ENST00000557280 UBE3BQ7Z3V4 1068 aa26.54■■□□□ 1.84
SEC23A-213ENST00000557280 API5Q9BZZ5 524 aaKnown RBP26.54■■□□□ 1.84
SEC23A-213ENST00000557280 SRCIN1Q9C0H9 1055 aa26.54■■□□□ 1.84
SEC23A-213ENST00000557280 RCAN3Q9UKA8 241 aa26.54■■□□□ 1.84
SEC23A-213ENST00000557280 H7C1W4 665 aa26.53■■□□□ 1.84
SEC23A-213ENST00000557280 CASP7P55210 303 aa26.53■■□□□ 1.84
SEC23A-213ENST00000557280 ZNF622Q969S3 477 aaKnown RBP eCLIP26.53■■□□□ 1.84
SEC23A-213ENST00000557280 PIM2Q9P1W9 311 aa26.53■■□□□ 1.84
SEC23A-213ENST00000557280 ABCC4O15439 1325 aa26.52■■□□□ 1.84
SEC23A-213ENST00000557280 ALDH1L1O75891 902 aa26.52■■□□□ 1.84
SEC23A-213ENST00000557280 ARHGAP45Q92619 1136 aa26.52■■□□□ 1.84
SEC23A-213ENST00000557280 CDHR2Q9BYE9 1310 aa26.51■■□□□ 1.83
SEC23A-213ENST00000557280 ATF7IPQ6VMQ6 1270 aa26.51■■□□□ 1.83
SEC23A-213ENST00000557280 MASTLQ96GX5 879 aa26.51■■□□□ 1.83
SEC23A-213ENST00000557280 NLRP3Q96P20 1036 aa26.51■■□□□ 1.83
SEC23A-213ENST00000557280 BCS1LQ9Y276 419 aa26.51■■□□□ 1.83
SEC23A-213ENST00000557280 COL4A1P02462 1669 aa26.5■■□□□ 1.83
SEC23A-213ENST00000557280 NPR1P16066 1061 aa26.5■■□□□ 1.83
SEC23A-213ENST00000557280 STYK1Q6J9G0 422 aa26.5■■□□□ 1.83
SEC23A-213ENST00000557280 PDZRN3Q9UPQ7 1066 aa26.5■■□□□ 1.83
SEC23A-213ENST00000557280 CACNA1SQ13698 1873 aa26.5■■□□□ 1.83
SEC23A-213ENST00000557280 GPR162Q16538 588 aa26.49■■□□□ 1.83
SEC23A-213ENST00000557280 DALRD3Q5D0E6 543 aaKnown RBP26.49■■□□□ 1.83
SEC23A-213ENST00000557280 ZKSCAN2Q63HK3 967 aa26.49■■□□□ 1.83
SEC23A-213ENST00000557280 SLC51AQ86UW1 340 aa26.49■■□□□ 1.83
SEC23A-213ENST00000557280 CLUAP1Q96AJ1 413 aa26.49■■□□□ 1.83
SEC23A-213ENST00000557280 GRM8O00222 908 aa26.48■■□□□ 1.83
SEC23A-213ENST00000557280 IPO8O15397 1037 aaKnown RBP26.48■■□□□ 1.83
SEC23A-213ENST00000557280 TTLL6Q8N841 843 aa26.48■■□□□ 1.83
SEC23A-213ENST00000557280 RPGRQ92834 1020 aaKnown RBP26.48■■□□□ 1.83
SEC23A-213ENST00000557280 SLX4Q8IY92 1834 aa26.48■■□□□ 1.83
SEC23A-213ENST00000557280 PDE8AO60658 829 aa26.46■■□□□ 1.83
SEC23A-213ENST00000557280 NBPF7P0C2Y1 421 aaPredicted RBP26.46■■□□□ 1.83
SEC23A-213ENST00000557280 HOXA10P31260 410 aaPredicted RBP26.46■■□□□ 1.83
SEC23A-213ENST00000557280 CCT4P50991 539 aaKnown RBP26.46■■□□□ 1.83
SEC23A-213ENST00000557280 PRPF40BQ6NWY9 871 aaKnown RBP26.46■■□□□ 1.83
SEC23A-213ENST00000557280 ARFGEF1Q9Y6D6 1849 aa26.46■■□□□ 1.83
SEC23A-213ENST00000557280 SF3B3Q15393 1217 aaKnown RBP26.45■■□□□ 1.82
SEC23A-213ENST00000557280 CCDC85AQ96PX6 553 aaPredicted RBP26.45■■□□□ 1.82
SEC23A-213ENST00000557280 C9orf78Q9NZ63 289 aaPredicted RBP26.45■■□□□ 1.82
SEC23A-213ENST00000557280 PLIN1O60240 522 aa26.44■■□□□ 1.82
SEC23A-213ENST00000557280 RLBP1P12271 317 aa26.44■■□□□ 1.82
SEC23A-213ENST00000557280 CTSWP56202 376 aa26.44■■□□□ 1.82
SEC23A-213ENST00000557280 CNKSR1Q969H4 720 aa26.44■■□□□ 1.82
SEC23A-213ENST00000557280 USP44Q9H0E7 712 aa26.44■■□□□ 1.82
SEC23A-213ENST00000557280 ZNF219Q9P2Y4 722 aaPredicted RBP26.44■■□□□ 1.82
SEC23A-213ENST00000557280 TAF1P21675 1872 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms