RNA–Protein interactions for RNA: ENST00000557273.5

RDH11-209, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 562 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-209ENST00000557273 TRPM7Q96QT4 1865 aa13.41□□□□□ -0.26
RDH11-209ENST00000557273 UBN2Q6ZU65 1347 aa13.4□□□□□ -0.26
RDH11-209ENST00000557273 ANKRD36CQ5JPF3 1778 aa13.4□□□□□ -0.26
RDH11-209ENST00000557273 FAM177BA6PVY3 158 aa13.4□□□□□ -0.26
RDH11-209ENST00000557273 FOXN1O15353 648 aa13.4□□□□□ -0.26
RDH11-209ENST00000557273 VEGFBP49765 207 aa13.4□□□□□ -0.26
RDH11-209ENST00000557273 EAPPQ56P03 285 aaPredicted RBP13.4□□□□□ -0.26
RDH11-209ENST00000557273 KIF6Q6ZMV9 814 aa13.4□□□□□ -0.26
RDH11-209ENST00000557273 NUTM1Q86Y26 1132 aa13.4□□□□□ -0.26
RDH11-209ENST00000557273 ZNF34Q8IZ26 560 aa13.4□□□□□ -0.26
RDH11-209ENST00000557273 CRAMP1Q96RY5 1269 aa13.4□□□□□ -0.26
RDH11-209ENST00000557273 MIS18AQ9NYP9 233 aa13.4□□□□□ -0.26
RDH11-209ENST00000557273 CTCFP49711 727 aaPredicted RBP13.39□□□□□ -0.27
RDH11-209ENST00000557273 NFE2L2Q16236 605 aa13.39□□□□□ -0.27
RDH11-209ENST00000557273 GIGYF2Q6Y7W6 1299 aaKnown RBP13.39□□□□□ -0.27
RDH11-209ENST00000557273 TTLL7Q6ZT98 887 aa13.39□□□□□ -0.27
RDH11-209ENST00000557273 CNTROBQ8N137 903 aa13.39□□□□□ -0.27
RDH11-209ENST00000557273 WBP1LQ9NX94 342 aa13.39□□□□□ -0.27
RDH11-209ENST00000557273 NTSR2O95665 410 aa13.38□□□□□ -0.27
RDH11-209ENST00000557273 EIF6P56537 245 aaKnown RBP13.38□□□□□ -0.27
RDH11-209ENST00000557273 SUSD4Q5VX71 490 aa13.38□□□□□ -0.27
RDH11-209ENST00000557273 LRP10Q7Z4F1 713 aa13.38□□□□□ -0.27
RDH11-209ENST00000557273 RPGRQ92834 1020 aaKnown RBP13.38□□□□□ -0.27
RDH11-209ENST00000557273 VPS33BQ9H267 617 aa13.38□□□□□ -0.27
RDH11-209ENST00000557273 CLEC11AQ9Y240 323 aa13.38□□□□□ -0.27
RDH11-209ENST00000557273 LAMB2P55268 1798 aa13.37□□□□□ -0.27
RDH11-209ENST00000557273 SCNN1DP51172 638 aa13.37□□□□□ -0.27
RDH11-209ENST00000557273 PARP10Q53GL7 1025 aa13.37□□□□□ -0.27
RDH11-209ENST00000557273 MAP1SQ66K74 1059 aaPredicted RBP13.37□□□□□ -0.27
RDH11-209ENST00000557273 AIDAQ96BJ3 306 aa13.37□□□□□ -0.27
RDH11-209ENST00000557273 RBM17Q96I25 401 aaKnown RBP13.37□□□□□ -0.27
RDH11-209ENST00000557273 PNNQ9H307 717 aaKnown RBP13.37□□□□□ -0.27
RDH11-209ENST00000557273 RRP7AQ9Y3A4 280 aaKnown RBP13.37□□□□□ -0.27
RDH11-209ENST00000557273 GPTP24298 496 aa13.36□□□□□ -0.27
RDH11-209ENST00000557273 LMOD1P29536 600 aaPredicted RBP13.36□□□□□ -0.27
RDH11-209ENST00000557273 DEFB115Q30KQ5 88 aa13.36□□□□□ -0.27
RDH11-209ENST00000557273 SLC10A5Q5PT55 438 aa13.36□□□□□ -0.27
RDH11-209ENST00000557273 PPP1R42Q7Z4L9 355 aa13.36□□□□□ -0.27
RDH11-209ENST00000557273 NGEFQ8N5V2 710 aa13.36□□□□□ -0.27
RDH11-209ENST00000557273 ZBTB3Q9H5J0 574 aa13.36□□□□□ -0.27
RDH11-209ENST00000557273 DDX21Q9NR30 783 aaKnown RBP eCLIP13.36□□□□□ -0.27
RDH11-209ENST00000557273 BABAM1Q9NWV8 329 aa13.36□□□□□ -0.27
RDH11-209ENST00000557273 PPEF1O14829 653 aaPredicted RBP13.35□□□□□ -0.27
RDH11-209ENST00000557273 MYL6BP14649 208 aa13.35□□□□□ -0.27
RDH11-209ENST00000557273 PDIA6Q15084 440 aa13.35□□□□□ -0.27
RDH11-209ENST00000557273 USP50Q70EL3 339 aaPredicted RBP13.35□□□□□ -0.27
RDH11-209ENST00000557273 LARGE2Q8N3Y3 721 aa13.35□□□□□ -0.27
RDH11-209ENST00000557273 THUMPD2Q9BTF0 503 aaKnown RBP13.35□□□□□ -0.27
RDH11-209ENST00000557273 MAPK8IP3Q9UPT6 1336 aa13.35□□□□□ -0.27
RDH11-209ENST00000557273 MAP2K1Q02750 393 aaPredicted RBP13.34□□□□□ -0.27
RDH11-209ENST00000557273 NLRP3Q96P20 1036 aa13.34□□□□□ -0.27
RDH11-209ENST00000557273 RTFDC1Q9BY42 306 aaPredicted RBP13.34□□□□□ -0.27
RDH11-209ENST00000557273 ATP6V0A2Q9Y487 856 aa13.34□□□□□ -0.27
RDH11-209ENST00000557273 CDHR2Q9BYE9 1310 aa13.34□□□□□ -0.27
RDH11-209ENST00000557273 WDR33Q9C0J8 1336 aaKnown RBP13.34□□□□□ -0.27
RDH11-209ENST00000557273 LRRC37AA6NMS7 1700 aa13.33□□□□□ -0.27
RDH11-209ENST00000557273 EPS15P42566 896 aa13.33□□□□□ -0.28
RDH11-209ENST00000557273 C3orf67Q6ZVT6 689 aa13.33□□□□□ -0.28
RDH11-209ENST00000557273 NIM1KQ8IY84 436 aa13.33□□□□□ -0.28
RDH11-209ENST00000557273 GJA3Q9Y6H8 435 aa13.33□□□□□ -0.28
RDH11-209ENST00000557273 PPIP5K2O43314 1243 aa13.32□□□□□ -0.28
RDH11-209ENST00000557273 HSPA8P11142 646 aaKnown RBP13.32□□□□□ -0.28
RDH11-209ENST00000557273 SUPT20HQ8NEM7 779 aa13.32□□□□□ -0.28
RDH11-209ENST00000557273 UTP14AQ9BVJ6 771 aaKnown RBP13.32□□□□□ -0.28
RDH11-209ENST00000557273 TSPYL4Q9UJ04 414 aa13.32□□□□□ -0.28
RDH11-209ENST00000557273 ABT1Q9ULW3 272 aaKnown RBP13.32□□□□□ -0.28
RDH11-209ENST00000557273 ABCC4O15439 1325 aa13.32□□□□□ -0.28
RDH11-209ENST00000557273 ECE1P42892 770 aa13.31□□□□□ -0.28
RDH11-209ENST00000557273 LBX1P52954 281 aa13.31□□□□□ -0.28
RDH11-209ENST00000557273 HSP90AB3PQ58FF7 597 aa13.31□□□□□ -0.28
RDH11-209ENST00000557273 SLC51AQ86UW1 340 aa13.31□□□□□ -0.28
RDH11-209ENST00000557273 TMX4Q9H1E5 349 aaPredicted RBP13.31□□□□□ -0.28
RDH11-209ENST00000557273 ADARB2Q9NS39 739 aaKnown RBP13.31□□□□□ -0.28
RDH11-209ENST00000557273 GPRC5DQ9NZD1 345 aa13.31□□□□□ -0.28
RDH11-209ENST00000557273 DUOX1Q9NRD9 1551 aa13.3□□□□□ -0.28
RDH11-209ENST00000557273 BBOX1O75936 387 aa13.3□□□□□ -0.28
RDH11-209ENST00000557273 AOC3Q16853 763 aa13.3□□□□□ -0.28
RDH11-209ENST00000557273 PROSER3Q2NL68 480 aa13.3□□□□□ -0.28
RDH11-209ENST00000557273 SP8Q8IXZ3 490 aa13.3□□□□□ -0.28
RDH11-209ENST00000557273 PGAP2Q9UHJ9 254 aa13.3□□□□□ -0.28
RDH11-209ENST00000557273 ZNRF3Q9ULT6 936 aa13.3□□□□□ -0.28
RDH11-209ENST00000557273 TLL2Q9Y6L7 1015 aa13.3□□□□□ -0.28
RDH11-209ENST00000557273 DDX60Q8IY21 1712 aaKnown RBP13.3□□□□□ -0.28
RDH11-209ENST00000557273 CXCL9Q07325 125 aa13.29□□□□□ -0.28
RDH11-209ENST00000557273 LMOD3Q0VAK6 560 aa13.29□□□□□ -0.28
RDH11-209ENST00000557273 KIAA2012Q0VF49 1180 aa13.29□□□□□ -0.28
RDH11-209ENST00000557273 CST9Q5W186 159 aa13.29□□□□□ -0.28
RDH11-209ENST00000557273 NLRP10Q86W26 655 aa13.29□□□□□ -0.28
RDH11-209ENST00000557273 HHIPL1Q96JK4 782 aa13.29□□□□□ -0.28
RDH11-209ENST00000557273 CAPNS2Q96L46 248 aa13.29□□□□□ -0.28
RDH11-209ENST00000557273 TAF1P21675 1872 aa13.29□□□□□ -0.28
RDH11-209ENST00000557273 RIPK4P57078 832 aa13.28□□□□□ -0.28
RDH11-209ENST00000557273 TMC4Q7Z404 712 aa13.28□□□□□ -0.28
RDH11-209ENST00000557273 ZC3H15Q8WU90 426 aaKnown RBP13.28□□□□□ -0.28
RDH11-209ENST00000557273 TCERG1O14776 1098 aaKnown RBP13.27□□□□□ -0.29
RDH11-209ENST00000557273 EIF2S2P20042 333 aaKnown RBP13.27□□□□□ -0.29
RDH11-209ENST00000557273 MAP2K2P36507 400 aa13.27□□□□□ -0.29
RDH11-209ENST00000557273 TMPOP42166 694 aaKnown RBP13.27□□□□□ -0.29
RDH11-209ENST00000557273 FMR1Q06787 632 aaKnown RBP eCLIP13.27□□□□□ -0.29
RDH11-209ENST00000557273 TCIRG1Q13488 830 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms