RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 NFIXQ14938 502 aa8.12□□□□□ -1.11
ATXN3-245ENST00000556958 AKAP4Q5JQC9 854 aa8.12□□□□□ -1.11
ATXN3-245ENST00000556958 USPL1Q5W0Q7 1092 aa8.12□□□□□ -1.11
ATXN3-245ENST00000556958 CST9Q5W186 159 aa8.12□□□□□ -1.11
ATXN3-245ENST00000556958 CIAPIN1Q6FI81 312 aa8.12□□□□□ -1.11
ATXN3-245ENST00000556958 HS6ST3Q8IZP7 471 aa8.12□□□□□ -1.11
ATXN3-245ENST00000556958 CNKSR1Q969H4 720 aa8.12□□□□□ -1.11
ATXN3-245ENST00000556958 C4AP0C0L4 1744 aa8.12□□□□□ -1.11
ATXN3-245ENST00000556958 FBLN1P23142 703 aa8.11□□□□□ -1.11
ATXN3-245ENST00000556958 LMOD1P29536 600 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-245ENST00000556958 RRS1Q15050 365 aaKnown RBP8.11□□□□□ -1.11
ATXN3-245ENST00000556958 PKN2Q16513 984 aaKnown RBP8.11□□□□□ -1.11
ATXN3-245ENST00000556958 BICDL1Q6ZP65 573 aa8.11□□□□□ -1.11
ATXN3-245ENST00000556958 CTU1Q7Z7A3 348 aaKnown RBP8.11□□□□□ -1.11
ATXN3-245ENST00000556958 SAPCD2Q86UD0 394 aa8.11□□□□□ -1.11
ATXN3-245ENST00000556958 BRIP1Q9BX63 1249 aa8.11□□□□□ -1.11
ATXN3-245ENST00000556958 SAGE1Q9NXZ1 904 aa8.11□□□□□ -1.11
ATXN3-245ENST00000556958 KIAA1551Q9HCM1 1747 aa8.11□□□□□ -1.11
ATXN3-245ENST00000556958 HSP90AB1P08238 724 aaKnown RBP8.1□□□□□ -1.11
ATXN3-245ENST00000556958 PHKG2P15735 406 aa8.1□□□□□ -1.11
ATXN3-245ENST00000556958 Q6ZNB5 142 aa8.1□□□□□ -1.11
ATXN3-245ENST00000556958 GPC2Q8N158 579 aa8.1□□□□□ -1.11
ATXN3-245ENST00000556958 INSRP06213 1382 aa8.1□□□□□ -1.11
ATXN3-245ENST00000556958 KDRP35968 1356 aa8.1□□□□□ -1.11
ATXN3-245ENST00000556958 TOGARAM1Q9Y4F4 1720 aa8.09□□□□□ -1.11
ATXN3-245ENST00000556958 RNF123Q5XPI4 1314 aa8.09□□□□□ -1.11
ATXN3-245ENST00000556958 UBR3Q6ZT12 1888 aa8.09□□□□□ -1.11
ATXN3-245ENST00000556958 ARFGEF1Q9Y6D6 1849 aa8.09□□□□□ -1.11
ATXN3-245ENST00000556958 PTCD1O75127 700 aaKnown RBP8.09□□□□□ -1.11
ATXN3-245ENST00000556958 HSP90AB2PQ58FF8 381 aa8.09□□□□□ -1.11
ATXN3-245ENST00000556958 USP50Q70EL3 339 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-245ENST00000556958 NARFQ9UHQ1 456 aa8.09□□□□□ -1.11
ATXN3-245ENST00000556958 STK24Q9Y6E0 443 aa8.09□□□□□ -1.11
ATXN3-245ENST00000556958 FZD9O00144 591 aa8.08□□□□□ -1.12
ATXN3-245ENST00000556958 CELF2O95319 508 aaKnown RBP8.08□□□□□ -1.12
ATXN3-245ENST00000556958 CABP4P57796 275 aa8.08□□□□□ -1.12
ATXN3-245ENST00000556958 CCDC93Q567U6 631 aa8.08□□□□□ -1.12
ATXN3-245ENST00000556958 STYK1Q6J9G0 422 aa8.08□□□□□ -1.12
ATXN3-245ENST00000556958 SPRYD3Q8NCJ5 442 aa8.08□□□□□ -1.12
ATXN3-245ENST00000556958 JDP2Q8WYK2 163 aa8.08□□□□□ -1.12
ATXN3-245ENST00000556958 PUS7Q96PZ0 661 aaKnown RBP8.08□□□□□ -1.12
ATXN3-245ENST00000556958 HPS5Q9UPZ3 1129 aa8.08□□□□□ -1.12
ATXN3-245ENST00000556958 FKBP4Q02790 459 aaKnown RBP eCLIP8.07□□□□□ -1.12
ATXN3-245ENST00000556958 FMR1Q06787 632 aaKnown RBP eCLIP8.07□□□□□ -1.12
ATXN3-245ENST00000556958 INTS5Q6P9B9 1019 aaKnown RBP8.07□□□□□ -1.12
ATXN3-245ENST00000556958 RTKN2Q8IZC4 609 aa8.07□□□□□ -1.12
ATXN3-245ENST00000556958 ZNF541Q9H0D2 1346 aa8.06□□□□□ -1.12
ATXN3-245ENST00000556958 TRAF5O00463 557 aa8.06□□□□□ -1.12
ATXN3-245ENST00000556958 NPHP1O15259 732 aa8.06□□□□□ -1.12
ATXN3-245ENST00000556958 EIF6P56537 245 aaKnown RBP8.06□□□□□ -1.12
ATXN3-245ENST00000556958 PRPF40BQ6NWY9 871 aaKnown RBP8.06□□□□□ -1.12
ATXN3-245ENST00000556958 MASTLQ96GX5 879 aa8.06□□□□□ -1.12
ATXN3-245ENST00000556958 KIF24Q5T7B8 1368 aa8.06□□□□□ -1.12
ATXN3-245ENST00000556958 TAF1LQ8IZX4 1826 aa8.06□□□□□ -1.12
ATXN3-245ENST00000556958 TRPA1O75762 1119 aa8.05□□□□□ -1.12
ATXN3-245ENST00000556958 THSD4Q6ZMP0 1018 aa8.05□□□□□ -1.12
ATXN3-245ENST00000556958 CCDC102AQ96A19 550 aa8.05□□□□□ -1.12
ATXN3-245ENST00000556958 ZNF277Q9NRM2 450 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-245ENST00000556958 RNF186Q9NXI6 227 aa8.05□□□□□ -1.12
ATXN3-245ENST00000556958 HDAC9Q9UKV0 1011 aa8.05□□□□□ -1.12
ATXN3-245ENST00000556958 GJA3Q9Y6H8 435 aa8.05□□□□□ -1.12
ATXN3-245ENST00000556958 A0A1W2PP64 1363 aa8.05□□□□□ -1.12
ATXN3-245ENST00000556958 FLT4P35916 1363 aa8.05□□□□□ -1.12
ATXN3-245ENST00000556958 VIRMAQ69YN4 1812 aaKnown RBP8.04□□□□□ -1.12
ATXN3-245ENST00000556958 SRGNP10124 158 aa8.04□□□□□ -1.12
ATXN3-245ENST00000556958 IARSP41252 1262 aaKnown RBP8.04□□□□□ -1.12
ATXN3-245ENST00000556958 EPS15P42566 896 aa8.04□□□□□ -1.12
ATXN3-245ENST00000556958 C7orf43Q8WVR3 580 aa8.04□□□□□ -1.12
ATXN3-245ENST00000556958 VPS9D1Q9Y2B5 631 aa8.04□□□□□ -1.12
ATXN3-245ENST00000556958 TONSLQ96HA7 1378 aa8.04□□□□□ -1.12
ATXN3-245ENST00000556958 FAM208AQ9UK61 1670 aaKnown RBP8.04□□□□□ -1.12
ATXN3-245ENST00000556958 SBF1O95248 1867 aa8.04□□□□□ -1.12
ATXN3-245ENST00000556958 SOS1Q07889 1333 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-245ENST00000556958 WASHC2AQ641Q2 1341 aa8.03□□□□□ -1.12
ATXN3-245ENST00000556958 PITPNM2Q9BZ72 1349 aa8.03□□□□□ -1.12
ATXN3-245ENST00000556958 BRCA1P38398 1863 aaKnown RBP8.03□□□□□ -1.12
ATXN3-245ENST00000556958 A0A087WZG4 1122 aa8.03□□□□□ -1.12
ATXN3-245ENST00000556958 FYB1O15117 783 aa8.03□□□□□ -1.12
ATXN3-245ENST00000556958 HUNKP57058 714 aa8.03□□□□□ -1.12
ATXN3-245ENST00000556958 ST5P78524 1137 aa8.03□□□□□ -1.12
ATXN3-245ENST00000556958 PLEKHO1Q53GL0 409 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-245ENST00000556958 PPP4R3BQ5MIZ7 849 aa8.03□□□□□ -1.12
ATXN3-245ENST00000556958 MFRPQ9BY79 579 aa8.03□□□□□ -1.12
ATXN3-245ENST00000556958 ZNF408Q9H9D4 720 aa8.03□□□□□ -1.12
ATXN3-245ENST00000556958 BCL2L12Q9HB09 334 aa8.03□□□□□ -1.12
ATXN3-245ENST00000556958 CUL9Q8IWT3 2517 aa8.02□□□□□ -1.12
ATXN3-245ENST00000556958 ROCK2O75116 1388 aaKnown RBP8.02□□□□□ -1.13
ATXN3-245ENST00000556958 RAB3GAP2Q9H2M9 1393 aa8.02□□□□□ -1.13
ATXN3-245ENST00000556958 ST20-MTHFSA0A0A6YYL1 179 aa8.02□□□□□ -1.13
ATXN3-245ENST00000556958 LCE2BO14633 110 aa8.02□□□□□ -1.13
ATXN3-245ENST00000556958 MTHFSP49914 203 aa8.02□□□□□ -1.13
ATXN3-245ENST00000556958 KIF23Q02241 960 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-245ENST00000556958 INTS3Q68E01 1043 aaKnown RBP8.02□□□□□ -1.13
ATXN3-245ENST00000556958 PRR5LQ6MZQ0 368 aa8.02□□□□□ -1.13
ATXN3-245ENST00000556958 RGMBQ6NW40 437 aa8.02□□□□□ -1.13
ATXN3-245ENST00000556958 CDC37L1Q7L3B6 337 aa8.02□□□□□ -1.13
ATXN3-245ENST00000556958 SYNE4Q8N205 404 aa8.02□□□□□ -1.13
ATXN3-245ENST00000556958 NFATC2IPQ8NCF5 419 aa8.02□□□□□ -1.13
ATXN3-245ENST00000556958 ZC3H15Q8WU90 426 aaKnown RBP8.02□□□□□ -1.13
ATXN3-245ENST00000556958 ZIC5Q96T25 663 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms