RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 GCC2Q8IWJ2 1684 aa8.34□□□□□ -1.08
CPSF2-205ENST00000556622 SHANK2Q9UPX8 1470 aa8.33□□□□□ -1.08
CPSF2-205ENST00000556622 RAB15P59190 212 aa8.33□□□□□ -1.08
CPSF2-205ENST00000556622 NPATQ14207 1427 aa8.33□□□□□ -1.08
CPSF2-205ENST00000556622 RIPOR1Q6ZS17 1223 aa8.33□□□□□ -1.08
CPSF2-205ENST00000556622 SIN3AQ96ST3 1273 aa8.33□□□□□ -1.08
CPSF2-205ENST00000556622 SUPT16HQ9Y5B9 1047 aaKnown RBP8.33□□□□□ -1.08
CPSF2-205ENST00000556622 PTPRKQ15262 1439 aa8.32□□□□□ -1.08
CPSF2-205ENST00000556622 ITGB7P26010 798 aa8.32□□□□□ -1.08
CPSF2-205ENST00000556622 THEMISQ8N1K5 641 aaPredicted RBP8.32□□□□□ -1.08
CPSF2-205ENST00000556622 MROH2AA6NES4 1674 aa8.31□□□□□ -1.08
CPSF2-205ENST00000556622 ERBINQ96RT1 1412 aa8.31□□□□□ -1.08
CPSF2-205ENST00000556622 ANKRD50Q9ULJ7 1429 aa8.31□□□□□ -1.08
CPSF2-205ENST00000556622 SHISA8B8ZZ34 492 aa8.31□□□□□ -1.08
CPSF2-205ENST00000556622 OIP5O43482 229 aa8.31□□□□□ -1.08
CPSF2-205ENST00000556622 ERVK-9P63128 1117 aa8.31□□□□□ -1.08
CPSF2-205ENST00000556622 TNRQ92752 1358 aa8.31□□□□□ -1.08
CPSF2-205ENST00000556622 PREX1Q8TCU6 1659 aa8.3□□□□□ -1.08
CPSF2-205ENST00000556622 CLUAP1Q96AJ1 413 aa8.3□□□□□ -1.08
CPSF2-205ENST00000556622 MPHOSPH9Q99550 1183 aa8.3□□□□□ -1.08
CPSF2-205ENST00000556622 CROCC2H7BZ55 1655 aa8.3□□□□□ -1.08
CPSF2-205ENST00000556622 KDM5DQ9BY66 1539 aa8.29□□□□□ -1.08
CPSF2-205ENST00000556622 SEMA3FQ13275 785 aa8.29□□□□□ -1.08
CPSF2-205ENST00000556622 FOXR1Q6PIV2 292 aa8.29□□□□□ -1.08
CPSF2-205ENST00000556622 PROSER2Q86WR7 435 aaPredicted RBP8.29□□□□□ -1.08
CPSF2-205ENST00000556622 ANKLE2Q86XL3 938 aa8.29□□□□□ -1.08
CPSF2-205ENST00000556622 GMCL1Q96IK5 515 aa8.29□□□□□ -1.08
CPSF2-205ENST00000556622 CCDC85AQ96PX6 553 aaPredicted RBP8.29□□□□□ -1.08
CPSF2-205ENST00000556622 ADGRL2O95490 1459 aa8.29□□□□□ -1.08
CPSF2-205ENST00000556622 EIF2AK4Q9P2K8 1649 aaKnown RBP8.29□□□□□ -1.08
CPSF2-205ENST00000556622 PZPP20742 1482 aa8.28□□□□□ -1.08
CPSF2-205ENST00000556622 NUP155O75694 1391 aa8.28□□□□□ -1.08
CPSF2-205ENST00000556622 TRAK2O60296 914 aa8.28□□□□□ -1.08
CPSF2-205ENST00000556622 MX2P20592 715 aa8.28□□□□□ -1.08
CPSF2-205ENST00000556622 C1orf229Q6ZS94 237 aaPredicted RBP8.28□□□□□ -1.08
CPSF2-205ENST00000556622 NFATC2IPQ8NCF5 419 aa8.28□□□□□ -1.08
CPSF2-205ENST00000556622 LRRC4BQ9NT99 713 aa8.28□□□□□ -1.08
CPSF2-205ENST00000556622 RNF17Q9BXT8 1623 aaKnown RBP8.28□□□□□ -1.08
CPSF2-205ENST00000556622 ABCC3O15438 1527 aa8.28□□□□□ -1.08
CPSF2-205ENST00000556622 RNF144AP50876 292 aaPredicted RBP8.27□□□□□ -1.09
CPSF2-205ENST00000556622 IDI1Q13907 227 aa8.27□□□□□ -1.09
CPSF2-205ENST00000556622 MAP7D1Q3KQU3 841 aa8.27□□□□□ -1.09
CPSF2-205ENST00000556622 LCE3BQ5TA77 95 aa8.27□□□□□ -1.09
CPSF2-205ENST00000556622 CC2D2BQ6DHV5 1058 aa8.27□□□□□ -1.09
CPSF2-205ENST00000556622 ADAMTS19Q8TE59 1207 aa8.27□□□□□ -1.09
CPSF2-205ENST00000556622 FAM135AQ9P2D6 1515 aa8.27□□□□□ -1.09
CPSF2-205ENST00000556622 ROCK2O75116 1388 aaKnown RBP8.26□□□□□ -1.09
CPSF2-205ENST00000556622 TSGA10IPQ3SY00 556 aa8.26□□□□□ -1.09
CPSF2-205ENST00000556622 SLFNL1Q499Z3 407 aa8.26□□□□□ -1.09
CPSF2-205ENST00000556622 GAS2L1Q99501 681 aaPredicted RBP8.26□□□□□ -1.09
CPSF2-205ENST00000556622 KRTAP4-12Q9BQ66 201 aa8.26□□□□□ -1.09
CPSF2-205ENST00000556622 SUV39H2Q9H5I1 410 aa8.26□□□□□ -1.09
CPSF2-205ENST00000556622 A2ML1A8K2U0 1454 aa8.26□□□□□ -1.09
CPSF2-205ENST00000556622 CAMSAP1Q5T5Y3 1602 aa8.25□□□□□ -1.09
CPSF2-205ENST00000556622 KTN1Q86UP2 1357 aaKnown RBP8.25□□□□□ -1.09
CPSF2-205ENST00000556622 POM121CA8CG34 1229 aa8.25□□□□□ -1.09
CPSF2-205ENST00000556622 LZTS3O60299 673 aaPredicted RBP8.25□□□□□ -1.09
CPSF2-205ENST00000556622 TXNDC2Q86VQ3 553 aa8.25□□□□□ -1.09
CPSF2-205ENST00000556622 OXCT2Q9BYC2 517 aaPredicted RBP8.25□□□□□ -1.09
CPSF2-205ENST00000556622 SLC52A1Q9NWF4 448 aa8.25□□□□□ -1.09
CPSF2-205ENST00000556622 MKL2Q9ULH7 1088 aa8.25□□□□□ -1.09
CPSF2-205ENST00000556622 PCDHB11Q9Y5F2 797 aa8.25□□□□□ -1.09
CPSF2-205ENST00000556622 EID1Q9Y6B2 187 aa8.25□□□□□ -1.09
CPSF2-205ENST00000556622 CEP152O94986 1710 aa8.25□□□□□ -1.09
CPSF2-205ENST00000556622 RPRD2Q5VT52 1461 aaKnown RBP8.25□□□□□ -1.09
CPSF2-205ENST00000556622 ARHGAP31Q2M1Z3 1444 aa8.24□□□□□ -1.09
CPSF2-205ENST00000556622 SCTRP47872 440 aa8.24□□□□□ -1.09
CPSF2-205ENST00000556622 GRIN2CQ14957 1233 aa8.24□□□□□ -1.09
CPSF2-205ENST00000556622 RNF135Q8IUD6 432 aa8.24□□□□□ -1.09
CPSF2-205ENST00000556622 TRERF1Q96PN7 1200 aa8.24□□□□□ -1.09
CPSF2-205ENST00000556622 CDCA7Q9BWT1 371 aaPredicted RBP8.24□□□□□ -1.09
CPSF2-205ENST00000556622 OSBPL3Q9H4L5 887 aa8.24□□□□□ -1.09
CPSF2-205ENST00000556622 CYLDQ9NQC7 956 aa8.24□□□□□ -1.09
CPSF2-205ENST00000556622 STRCQ7RTU9 1775 aa8.24□□□□□ -1.09
CPSF2-205ENST00000556622 MROH1Q8NDA8 1641 aa8.24□□□□□ -1.09
CPSF2-205ENST00000556622 NLRP1Q9C000 1473 aa8.24□□□□□ -1.09
CPSF2-205ENST00000556622 ZC3H13Q5T200 1668 aaKnown RBP8.24□□□□□ -1.09
CPSF2-205ENST00000556622 CEP170BQ9Y4F5 1589 aaPredicted RBP8.23□□□□□ -1.09
CPSF2-205ENST00000556622 PTPRTO14522 1441 aa8.23□□□□□ -1.09
CPSF2-205ENST00000556622 C1QTNF9BB2RNN3 333 aa8.23□□□□□ -1.09
CPSF2-205ENST00000556622 POU4F2Q12837 409 aa8.23□□□□□ -1.09
CPSF2-205ENST00000556622 USP4Q13107 963 aa8.23□□□□□ -1.09
CPSF2-205ENST00000556622 HDGFL1Q5TGJ6 251 aa8.23□□□□□ -1.09
CPSF2-205ENST00000556622 RRAGCQ9HB90 399 aa8.23□□□□□ -1.09
CPSF2-205ENST00000556622 DYRK1BQ9Y463 629 aa8.23□□□□□ -1.09
CPSF2-205ENST00000556622 ERVK-7P63135 1459 aa8.23□□□□□ -1.09
CPSF2-205ENST00000556622 PRDM15P57071 1507 aaPredicted RBP8.23□□□□□ -1.09
CPSF2-205ENST00000556622 UGGT1Q9NYU2 1555 aa8.22□□□□□ -1.09
CPSF2-205ENST00000556622 DEPDC5O75140 1603 aa8.22□□□□□ -1.09
CPSF2-205ENST00000556622 THBS1P07996 1170 aa8.22□□□□□ -1.09
CPSF2-205ENST00000556622 HOXB4P17483 251 aaPredicted RBP8.22□□□□□ -1.09
CPSF2-205ENST00000556622 SIRT1Q96EB6 747 aa8.22□□□□□ -1.09
CPSF2-205ENST00000556622 ANKRD30BQ9BXX2 1392 aa8.22□□□□□ -1.09
CPSF2-205ENST00000556622 MYO3AQ8NEV4 1616 aa8.21□□□□□ -1.09
CPSF2-205ENST00000556622 LMTK2Q8IWU2 1503 aa8.21□□□□□ -1.1
CPSF2-205ENST00000556622 ATP5J2-PTCD1G3V325 749 aa8.21□□□□□ -1.1
CPSF2-205ENST00000556622 H7C1W4 665 aa8.21□□□□□ -1.1
CPSF2-205ENST00000556622 MEN1O00255 615 aa8.21□□□□□ -1.1
CPSF2-205ENST00000556622 HSPA5P11021 654 aaKnown RBP8.21□□□□□ -1.1
CPSF2-205ENST00000556622 LTKP29376 864 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms