RNA–Protein interactions for RNA: ENST00000556507.1

TGFB3-205, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-205ENST00000556507 MARK1Q9P0L2 795 aa5.83□□□□□ -1.48
TGFB3-205ENST00000556507 HCN2Q9UL51 889 aa5.83□□□□□ -1.48
TGFB3-205ENST00000556507 PRR12Q9ULL5 1215 aa5.83□□□□□ -1.48
TGFB3-205ENST00000556507 DNMBPQ6XZF7 1577 aa5.82□□□□□ -1.48
TGFB3-205ENST00000556507 NEURL1BA8MQ27 555 aa5.82□□□□□ -1.48
TGFB3-205ENST00000556507 SHISA8B8ZZ34 492 aa5.82□□□□□ -1.48
TGFB3-205ENST00000556507 EFSO43281 561 aa5.82□□□□□ -1.48
TGFB3-205ENST00000556507 LGR5O75473 907 aa5.82□□□□□ -1.48
TGFB3-205ENST00000556507 RFX1P22670 979 aa5.82□□□□□ -1.48
TGFB3-205ENST00000556507 AMPD1P23109 780 aa5.82□□□□□ -1.48
TGFB3-205ENST00000556507 LAMC2Q13753 1193 aa5.82□□□□□ -1.48
TGFB3-205ENST00000556507 POTEAQ6S8J7 498 aa5.82□□□□□ -1.48
TGFB3-205ENST00000556507 SLCO4C1Q6ZQN7 724 aa5.82□□□□□ -1.48
TGFB3-205ENST00000556507 RRAGCQ9HB90 399 aa5.82□□□□□ -1.48
TGFB3-205ENST00000556507 ANKIB1Q9P2G1 1089 aa5.82□□□□□ -1.48
TGFB3-205ENST00000556507 ABCA10Q8WWZ4 1543 aa5.82□□□□□ -1.48
TGFB3-205ENST00000556507 ADH6P28332 368 aa5.81□□□□□ -1.48
TGFB3-205ENST00000556507 CDCA8Q53HL2 280 aa5.81□□□□□ -1.48
TGFB3-205ENST00000556507 ALDH16A1Q8IZ83 802 aa5.81□□□□□ -1.48
TGFB3-205ENST00000556507 STAG2Q8N3U4 1231 aa5.81□□□□□ -1.48
TGFB3-205ENST00000556507 KCTD17Q8N5Z5 321 aa5.81□□□□□ -1.48
TGFB3-205ENST00000556507 C2orf49Q9BVC5 232 aaPredicted RBP5.81□□□□□ -1.48
TGFB3-205ENST00000556507 ZMYND15Q9H091 742 aa5.81□□□□□ -1.48
TGFB3-205ENST00000556507 AVENQ9NQS1 362 aaPredicted RBP5.81□□□□□ -1.48
TGFB3-205ENST00000556507 STRN4Q9NRL3 753 aa5.81□□□□□ -1.48
TGFB3-205ENST00000556507 FHAD1B1AJZ9 1412 aa5.81□□□□□ -1.48
TGFB3-205ENST00000556507 CCNB3Q8WWL7 1395 aa5.8□□□□□ -1.48
TGFB3-205ENST00000556507 LAMC3Q9Y6N6 1575 aa5.8□□□□□ -1.48
TGFB3-205ENST00000556507 TOPBP1Q92547 1522 aa5.8□□□□□ -1.48
TGFB3-205ENST00000556507 CENPBP07199 599 aaPredicted RBP5.8□□□□□ -1.48
TGFB3-205ENST00000556507 EPXP11678 715 aa5.8□□□□□ -1.48
TGFB3-205ENST00000556507 SNRPNP63162 240 aaKnown RBP5.8□□□□□ -1.48
TGFB3-205ENST00000556507 SFSWAPQ12872 951 aaKnown RBP5.8□□□□□ -1.48
TGFB3-205ENST00000556507 ZNF468Q5VIY5 522 aaPredicted RBP5.8□□□□□ -1.48
TGFB3-205ENST00000556507 NGLY1Q96IV0 654 aa5.8□□□□□ -1.48
TGFB3-205ENST00000556507 HSH2DQ96JZ2 352 aa5.8□□□□□ -1.48
TGFB3-205ENST00000556507 CEP63Q96MT8 703 aa5.8□□□□□ -1.48
TGFB3-205ENST00000556507 KLF15Q9UIH9 416 aa5.8□□□□□ -1.48
TGFB3-205ENST00000556507 IGFBP4P22692 258 aa5.79□□□□□ -1.48
TGFB3-205ENST00000556507 PCBP4P57723 403 aaKnown RBP5.79□□□□□ -1.48
TGFB3-205ENST00000556507 ZNF280CQ8ND82 737 aa5.79□□□□□ -1.48
TGFB3-205ENST00000556507 FAM200AQ8TCP9 573 aa5.79□□□□□ -1.48
TGFB3-205ENST00000556507 BTBD6Q96KE9 485 aa5.79□□□□□ -1.48
TGFB3-205ENST00000556507 SUSD3Q96L08 255 aa5.79□□□□□ -1.48
TGFB3-205ENST00000556507 MKL2Q9ULH7 1088 aa5.79□□□□□ -1.48
TGFB3-205ENST00000556507 PDS5BQ9NTI5 1447 aa5.79□□□□□ -1.48
TGFB3-205ENST00000556507 ACIN1Q9UKV3 1341 aaKnown RBP5.78□□□□□ -1.48
TGFB3-205ENST00000556507 POLA1P09884 1462 aaPredicted RBP5.78□□□□□ -1.48
TGFB3-205ENST00000556507 HIF1AQ16665 826 aa5.78□□□□□ -1.48
TGFB3-205ENST00000556507 C14orf37Q86TY3 774 aa5.78□□□□□ -1.48
TGFB3-205ENST00000556507 FCHSD1Q86WN1 690 aa5.78□□□□□ -1.48
TGFB3-205ENST00000556507 BRD7Q9NPI1 651 aa5.78□□□□□ -1.48
TGFB3-205ENST00000556507 DHX57Q6P158 1386 aaKnown RBP5.78□□□□□ -1.48
TGFB3-205ENST00000556507 RAD54L2Q9Y4B4 1467 aa5.77□□□□□ -1.49
TGFB3-205ENST00000556507 TIAM1Q13009 1591 aa5.77□□□□□ -1.49
TGFB3-205ENST00000556507 GRIN2CQ14957 1233 aa5.77□□□□□ -1.49
TGFB3-205ENST00000556507 CHSY3Q70JA7 882 aa5.77□□□□□ -1.49
TGFB3-205ENST00000556507 SYT9Q86SS6 491 aa5.77□□□□□ -1.49
TGFB3-205ENST00000556507 NOVA2Q9UNW9 492 aaKnown RBP5.77□□□□□ -1.49
TGFB3-205ENST00000556507 KCNH4Q9UQ05 1017 aa5.77□□□□□ -1.49
TGFB3-205ENST00000556507 CUL7Q14999 1698 aa5.77□□□□□ -1.49
TGFB3-205ENST00000556507 EFCAB5A4FU69 1503 aa5.77□□□□□ -1.49
TGFB3-205ENST00000556507 AQRO60306 1485 aaKnown RBP eCLIP5.77□□□□□ -1.49
TGFB3-205ENST00000556507 LRRC9Q6ZRR7 1453 aa5.77□□□□□ -1.49
TGFB3-205ENST00000556507 ALAS2P22557 587 aa5.76□□□□□ -1.49
TGFB3-205ENST00000556507 WEE1P30291 646 aa5.76□□□□□ -1.49
TGFB3-205ENST00000556507 KCNQ4P56696 695 aa5.76□□□□□ -1.49
TGFB3-205ENST00000556507 TYRO3Q06418 890 aa5.76□□□□□ -1.49
TGFB3-205ENST00000556507 NEUROD1Q13562 356 aa5.76□□□□□ -1.49
TGFB3-205ENST00000556507 RTN1Q16799 776 aa5.76□□□□□ -1.49
TGFB3-205ENST00000556507 BTLAQ7Z6A9 289 aa5.76□□□□□ -1.49
TGFB3-205ENST00000556507 VTI1AQ96AJ9 217 aa5.76□□□□□ -1.49
TGFB3-205ENST00000556507 DCAF5Q96JK2 942 aa5.76□□□□□ -1.49
TGFB3-205ENST00000556507 SLC30A3Q99726 388 aa5.76□□□□□ -1.49
TGFB3-205ENST00000556507 NESP48681 1621 aa5.76□□□□□ -1.49
TGFB3-205ENST00000556507 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.76□□□□□ -1.49
TGFB3-205ENST00000556507 CASKIN1Q8WXD9 1431 aa5.75□□□□□ -1.49
TGFB3-205ENST00000556507 PIK3R2O00459 728 aa5.75□□□□□ -1.49
TGFB3-205ENST00000556507 FOXO3O43524 673 aa5.75□□□□□ -1.49
TGFB3-205ENST00000556507 SIN3BO75182 1162 aa5.75□□□□□ -1.49
TGFB3-205ENST00000556507 HOXB4P17483 251 aaPredicted RBP5.75□□□□□ -1.49
TGFB3-205ENST00000556507 SPEM2Q0P670 501 aa5.75□□□□□ -1.49
TGFB3-205ENST00000556507 GPAT2Q6NUI2 795 aa5.75□□□□□ -1.49
TGFB3-205ENST00000556507 LINC00114Q6XXX2 140 aa5.75□□□□□ -1.49
TGFB3-205ENST00000556507 FMN1Q68DA7 1419 aa5.74□□□□□ -1.49
TGFB3-205ENST00000556507 SETD5Q9C0A6 1442 aa5.74□□□□□ -1.49
TGFB3-205ENST00000556507 URB2Q14146 1524 aaKnown RBP5.74□□□□□ -1.49
TGFB3-205ENST00000556507 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.74□□□□□ -1.49
TGFB3-205ENST00000556507 ELOA3CA0A087WX78 387 aaPredicted RBP5.74□□□□□ -1.49
TGFB3-205ENST00000556507 ELOA3DA6NLF2 546 aaPredicted RBP5.74□□□□□ -1.49
TGFB3-205ENST00000556507 GNB5O14775 395 aa5.74□□□□□ -1.49
TGFB3-205ENST00000556507 DGKGP49619 791 aa5.74□□□□□ -1.49
TGFB3-205ENST00000556507 ELOA3BQ3SY89 546 aa5.74□□□□□ -1.49
TGFB3-205ENST00000556507 RAB44Q7Z6P3 723 aaPredicted RBP5.74□□□□□ -1.49
TGFB3-205ENST00000556507 ELOA3Q8NG57 546 aa5.74□□□□□ -1.49
TGFB3-205ENST00000556507 CCDC97Q96F63 343 aaPredicted RBP5.74□□□□□ -1.49
TGFB3-205ENST00000556507 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.74□□□□□ -1.49
TGFB3-205ENST00000556507 GAPVD1Q14C86 1478 aa5.74□□□□□ -1.49
TGFB3-205ENST00000556507 FYCO1Q9BQS8 1478 aa5.74□□□□□ -1.49
TGFB3-205ENST00000556507 TGFBR3LH3BV60 316 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms