RNA–Protein interactions for RNA: ENST00000556076.5

CHGA-204, Transcript of chromogranin A, humanhuman

TSL 5

Gene CHGA, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-204ENST00000556076 CCDC93Q567U6 631 aa21.05■□□□□ 0.96
CHGA-204ENST00000556076 IBTKQ9P2D0 1353 aaPredicted RBP21.05■□□□□ 0.96
CHGA-204ENST00000556076 POTECB2RU33 542 aa21.04■□□□□ 0.96
CHGA-204ENST00000556076 HCLS1P14317 486 aaPredicted RBP21.04■□□□□ 0.96
CHGA-204ENST00000556076 NLRP10Q86W26 655 aa21.04■□□□□ 0.96
CHGA-204ENST00000556076 C16orf71Q8IYS4 520 aaPredicted RBP21.04■□□□□ 0.96
CHGA-204ENST00000556076 C8orf58Q8NAV2 365 aa21.04■□□□□ 0.96
CHGA-204ENST00000556076 RPGRQ92834 1020 aaKnown RBP21.04■□□□□ 0.96
CHGA-204ENST00000556076 ZC3H4Q9UPT8 1303 aaKnown RBP21.04■□□□□ 0.96
CHGA-204ENST00000556076 HTRA3P83110 453 aa21.03■□□□□ 0.96
CHGA-204ENST00000556076 PPP1R42Q7Z4L9 355 aa21.03■□□□□ 0.96
CHGA-204ENST00000556076 UTP14AQ9BVJ6 771 aaKnown RBP21.03■□□□□ 0.96
CHGA-204ENST00000556076 MRS2Q9HD23 443 aa21.03■□□□□ 0.96
CHGA-204ENST00000556076 IFT57Q9NWB7 429 aa21.03■□□□□ 0.96
CHGA-204ENST00000556076 TAF1P21675 1872 aa21.03■□□□□ 0.96
CHGA-204ENST00000556076 ALDH1B1P30837 517 aa21.02■□□□□ 0.96
CHGA-204ENST00000556076 TCIRG1Q13488 830 aa21.02■□□□□ 0.96
CHGA-204ENST00000556076 PARP10Q53GL7 1025 aa21.02■□□□□ 0.96
CHGA-204ENST00000556076 SOGA3Q5TF21 947 aa21.02■□□□□ 0.96
CHGA-204ENST00000556076 RBM46Q8TBY0 533 aaKnown RBP21.02■□□□□ 0.96
CHGA-204ENST00000556076 TSR2Q969E8 191 aaKnown RBP21.02■□□□□ 0.96
CHGA-204ENST00000556076 RIC1Q4ADV7 1423 aa21.02■□□□□ 0.96
CHGA-204ENST00000556076 ATP5J2-PTCD1G3V325 749 aa21.01■□□□□ 0.95
CHGA-204ENST00000556076 DDNO94850 711 aaPredicted RBP21.01■□□□□ 0.95
CHGA-204ENST00000556076 HOXB7P09629 217 aa21.01■□□□□ 0.95
CHGA-204ENST00000556076 GNAI1P63096 354 aa21.01■□□□□ 0.95
CHGA-204ENST00000556076 FKBP4Q02790 459 aaKnown RBP eCLIP21.01■□□□□ 0.95
CHGA-204ENST00000556076 PHAXQ9H814 394 aaKnown RBP21.01■□□□□ 0.95
CHGA-204ENST00000556076 DBF4Q9UBU7 674 aaPredicted RBP21.01■□□□□ 0.95
CHGA-204ENST00000556076 SNED1Q8TER0 1413 aa21.01■□□□□ 0.95
CHGA-204ENST00000556076 WDR90Q96KV7 1748 aa21.01■□□□□ 0.95
CHGA-204ENST00000556076 COL4A5P29400 1685 aa21■□□□□ 0.95
CHGA-204ENST00000556076 HOXA10P31260 410 aaPredicted RBP21■□□□□ 0.95
CHGA-204ENST00000556076 TSPYL6Q8N831 410 aa21■□□□□ 0.95
CHGA-204ENST00000556076 TRMT112Q9UI30 125 aaKnown RBP21■□□□□ 0.95
CHGA-204ENST00000556076 ANP32CO43423 234 aa20.99■□□□□ 0.95
CHGA-204ENST00000556076 VEGFAP15692 232 aaPredicted RBP20.99■□□□□ 0.95
CHGA-204ENST00000556076 ANKRD13DQ6ZTN6 518 aa20.99■□□□□ 0.95
CHGA-204ENST00000556076 RBM17Q96I25 401 aaKnown RBP20.99■□□□□ 0.95
CHGA-204ENST00000556076 SALL2Q9Y467 1007 aaPredicted RBP20.99■□□□□ 0.95
CHGA-204ENST00000556076 ZNF541Q9H0D2 1346 aa20.99■□□□□ 0.95
CHGA-204ENST00000556076 DDX60Q8IY21 1712 aaKnown RBP20.98■□□□□ 0.95
CHGA-204ENST00000556076 RTL5Q5HYW3 569 aaPredicted RBP20.98■□□□□ 0.95
CHGA-204ENST00000556076 SLC10A5Q5PT55 438 aa20.98■□□□□ 0.95
CHGA-204ENST00000556076 PLBD2Q8NHP8 589 aa20.98■□□□□ 0.95
CHGA-204ENST00000556076 PPEF1O14829 653 aaPredicted RBP20.97■□□□□ 0.95
CHGA-204ENST00000556076 POTEIP0CG38 1075 aa20.97■□□□□ 0.95
CHGA-204ENST00000556076 POTEJP0CG39 1038 aa20.97■□□□□ 0.95
CHGA-204ENST00000556076 DPY19L2Q6NUT2 758 aa20.97■□□□□ 0.95
CHGA-204ENST00000556076 RTKN2Q8IZC4 609 aa20.97■□□□□ 0.95
CHGA-204ENST00000556076 NLRP3Q96P20 1036 aa20.97■□□□□ 0.95
CHGA-204ENST00000556076 CRAMP1Q96RY5 1269 aa20.97■□□□□ 0.95
CHGA-204ENST00000556076 HYPKQ9NX55 129 aa20.97■□□□□ 0.95
CHGA-204ENST00000556076 ABCC4O15439 1325 aa20.97■□□□□ 0.95
CHGA-204ENST00000556076 COL4A1P02462 1669 aa20.96■□□□□ 0.95
CHGA-204ENST00000556076 CALD1Q05682 793 aaKnown RBP20.96■□□□□ 0.95
CHGA-204ENST00000556076 HSP90AB3PQ58FF7 597 aa20.96■□□□□ 0.95
CHGA-204ENST00000556076 WWC1Q8IX03 1113 aa20.96■□□□□ 0.95
CHGA-204ENST00000556076 IARSP41252 1262 aaKnown RBP20.95■□□□□ 0.94
CHGA-204ENST00000556076 FAM89AQ96GI7 184 aa20.95■□□□□ 0.94
CHGA-204ENST00000556076 ISCA1Q9BUE6 129 aa20.95■□□□□ 0.94
CHGA-204ENST00000556076 SH3TC1Q8TE82 1336 aa20.94■□□□□ 0.94
CHGA-204ENST00000556076 APLP1P51693 650 aa20.93■□□□□ 0.94
CHGA-204ENST00000556076 FSTL1Q12841 308 aa20.93■□□□□ 0.94
CHGA-204ENST00000556076 JARID2Q92833 1246 aaPredicted RBP20.93■□□□□ 0.94
CHGA-204ENST00000556076 RIC3Q7Z5B4 369 aa20.92■□□□□ 0.94
CHGA-204ENST00000556076 SMC1BQ8NDV3 1235 aa20.92■□□□□ 0.94
CHGA-204ENST00000556076 PSMD1Q99460 953 aa20.92■□□□□ 0.94
CHGA-204ENST00000556076 RNF123Q5XPI4 1314 aa20.91■□□□□ 0.94
CHGA-204ENST00000556076 DNAJC5GQ8N7S2 189 aa20.91■□□□□ 0.94
CHGA-204ENST00000556076 MYD88Q99836 296 aa20.91■□□□□ 0.94
CHGA-204ENST00000556076 GOLGA2Q08379 1002 aa20.9■□□□□ 0.94
CHGA-204ENST00000556076 FAM9BQ8IZU0 186 aa20.9■□□□□ 0.94
CHGA-204ENST00000556076 ATP6V0A2Q9Y487 856 aa20.9■□□□□ 0.94
CHGA-204ENST00000556076 FZD9O00144 591 aa20.89■□□□□ 0.93
CHGA-204ENST00000556076 CCDC27Q2M243 656 aa20.89■□□□□ 0.93
CHGA-204ENST00000556076 AOC3Q16853 763 aa20.88■□□□□ 0.93
CHGA-204ENST00000556076 CCDC30Q5VVM6 783 aa20.88■□□□□ 0.93
CHGA-204ENST00000556076 CC2D2BQ6DHV5 1058 aa20.88■□□□□ 0.93
CHGA-204ENST00000556076 DDX46Q7L014 1031 aaKnown RBP20.88■□□□□ 0.93
CHGA-204ENST00000556076 G2E3Q7L622 706 aa20.88■□□□□ 0.93
CHGA-204ENST00000556076 LARGE2Q8N3Y3 721 aa20.88■□□□□ 0.93
CHGA-204ENST00000556076 L3MBTL3Q96JM7 780 aaPredicted RBP20.87■□□□□ 0.93
CHGA-204ENST00000556076 SPINK5Q9NQ38 1064 aaPredicted RBP20.87■□□□□ 0.93
CHGA-204ENST00000556076 GJA3Q9Y6H8 435 aa20.87■□□□□ 0.93
CHGA-204ENST00000556076 SCN4AP35499 1836 aa20.86■□□□□ 0.93
CHGA-204ENST00000556076 IRS4O14654 1257 aaPredicted RBP20.86■□□□□ 0.93
CHGA-204ENST00000556076 GRAPQ13588 217 aa20.86■□□□□ 0.93
CHGA-204ENST00000556076 TWISTNBQ3B726 338 aaPredicted RBP20.86■□□□□ 0.93
CHGA-204ENST00000556076 GRAPLQ8TC17 118 aaPredicted RBP20.86■□□□□ 0.93
CHGA-204ENST00000556076 CELF1Q92879 486 aaKnown RBP20.86■□□□□ 0.93
CHGA-204ENST00000556076 TAF1DQ9H5J8 278 aaPredicted RBP20.86■□□□□ 0.93
CHGA-204ENST00000556076 LTBP1Q14766 1721 aa20.86■□□□□ 0.93
CHGA-204ENST00000556076 PCNTO95613 3336 aa20.85■□□□□ 0.93
CHGA-204ENST00000556076 FANCIQ9NVI1 1328 aa20.85■□□□□ 0.93
CHGA-204ENST00000556076 PPIP5K2O43314 1243 aa20.85■□□□□ 0.93
CHGA-204ENST00000556076 TRIM28Q13263 835 aaKnown RBP20.85■□□□□ 0.93
CHGA-204ENST00000556076 EAPPQ56P03 285 aaPredicted RBP20.85■□□□□ 0.93
CHGA-204ENST00000556076 JDP2Q8WYK2 163 aa20.85■□□□□ 0.93
CHGA-204ENST00000556076 MAP3K2Q9Y2U5 619 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms