RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 CRY2Q49AN0 593 aa22.36■■□□□ 1.17
GPHN-211ENST00000556020 ZNF428Q96B54 188 aa22.36■■□□□ 1.17
GPHN-211ENST00000556020 UTP14AQ9BVJ6 771 aaKnown RBP22.36■■□□□ 1.17
GPHN-211ENST00000556020 DUSP27Q5VZP5 1158 aa22.35■■□□□ 1.17
GPHN-211ENST00000556020 C3orf67Q6ZVT6 689 aa22.35■■□□□ 1.17
GPHN-211ENST00000556020 ZNF277Q9NRM2 450 aaPredicted RBP22.35■■□□□ 1.17
GPHN-211ENST00000556020 RIC1Q4ADV7 1423 aa22.34■■□□□ 1.17
GPHN-211ENST00000556020 TCERG1O14776 1098 aaKnown RBP22.34■■□□□ 1.17
GPHN-211ENST00000556020 APLP1P51693 650 aa22.34■■□□□ 1.17
GPHN-211ENST00000556020 FKBP4Q02790 459 aaKnown RBP eCLIP22.34■■□□□ 1.17
GPHN-211ENST00000556020 HSP90AB3PQ58FF7 597 aa22.34■■□□□ 1.17
GPHN-211ENST00000556020 ZNF316A6NFI3 1004 aaPredicted RBP22.33■■□□□ 1.17
GPHN-211ENST00000556020 HOXB7P09629 217 aa22.33■■□□□ 1.17
GPHN-211ENST00000556020 RTKN2Q8IZC4 609 aa22.33■■□□□ 1.17
GPHN-211ENST00000556020 RBM17Q96I25 401 aaKnown RBP22.33■■□□□ 1.17
GPHN-211ENST00000556020 WDR90Q96KV7 1748 aa22.33■■□□□ 1.17
GPHN-211ENST00000556020 ELL2O00472 640 aaPredicted RBP22.32■■□□□ 1.16
GPHN-211ENST00000556020 GNAI1P63096 354 aa22.32■■□□□ 1.16
GPHN-211ENST00000556020 CALD1Q05682 793 aaKnown RBP22.32■■□□□ 1.16
GPHN-211ENST00000556020 FSTL1Q12841 308 aa22.32■■□□□ 1.16
GPHN-211ENST00000556020 NLRP3Q96P20 1036 aa22.32■■□□□ 1.16
GPHN-211ENST00000556020 IFT57Q9NWB7 429 aa22.32■■□□□ 1.16
GPHN-211ENST00000556020 DBF4Q9UBU7 674 aaPredicted RBP22.32■■□□□ 1.16
GPHN-211ENST00000556020 LAMB2P55268 1798 aa22.31■■□□□ 1.16
GPHN-211ENST00000556020 DDNO94850 711 aaPredicted RBP22.31■■□□□ 1.16
GPHN-211ENST00000556020 ZNF853P0CG23 659 aa22.31■■□□□ 1.16
GPHN-211ENST00000556020 HOXA10P31260 410 aaPredicted RBP22.31■■□□□ 1.16
GPHN-211ENST00000556020 TCIRG1Q13488 830 aa22.31■■□□□ 1.16
GPHN-211ENST00000556020 NLRP10Q86W26 655 aa22.31■■□□□ 1.16
GPHN-211ENST00000556020 SMC1BQ8NDV3 1235 aa22.31■■□□□ 1.16
GPHN-211ENST00000556020 POTECB2RU33 542 aa22.3■■□□□ 1.16
GPHN-211ENST00000556020 SLC51AQ86UW1 340 aa22.3■■□□□ 1.16
GPHN-211ENST00000556020 SYNE4Q8N205 404 aa22.3■■□□□ 1.16
GPHN-211ENST00000556020 TRMT112Q9UI30 125 aaKnown RBP22.3■■□□□ 1.16
GPHN-211ENST00000556020 PPEF1O14829 653 aaPredicted RBP22.29■■□□□ 1.16
GPHN-211ENST00000556020 HCLS1P14317 486 aaPredicted RBP22.29■■□□□ 1.16
GPHN-211ENST00000556020 ANP32CO43423 234 aa22.28■■□□□ 1.16
GPHN-211ENST00000556020 IARSP41252 1262 aaKnown RBP22.28■■□□□ 1.16
GPHN-211ENST00000556020 HTRA3P83110 453 aa22.28■■□□□ 1.16
GPHN-211ENST00000556020 ANKRD13DQ6ZTN6 518 aa22.28■■□□□ 1.16
GPHN-211ENST00000556020 PLBD2Q8NHP8 589 aa22.28■■□□□ 1.16
GPHN-211ENST00000556020 CRAMP1Q96RY5 1269 aa22.28■■□□□ 1.16
GPHN-211ENST00000556020 MRS2Q9HD23 443 aa22.28■■□□□ 1.16
GPHN-211ENST00000556020 HYPKQ9NX55 129 aa22.28■■□□□ 1.16
GPHN-211ENST00000556020 SLC10A5Q5PT55 438 aa22.27■■□□□ 1.16
GPHN-211ENST00000556020 ZNF541Q9H0D2 1346 aa22.27■■□□□ 1.16
GPHN-211ENST00000556020 ATP5J2-PTCD1G3V325 749 aa22.26■■□□□ 1.15
GPHN-211ENST00000556020 CC2D2BQ6DHV5 1058 aa22.26■■□□□ 1.15
GPHN-211ENST00000556020 RNF123Q5XPI4 1314 aa22.26■■□□□ 1.15
GPHN-211ENST00000556020 SH3TC1Q8TE82 1336 aa22.26■■□□□ 1.15
GPHN-211ENST00000556020 SNED1Q8TER0 1413 aa22.25■■□□□ 1.15
GPHN-211ENST00000556020 C8orf58Q8NAV2 365 aa22.25■■□□□ 1.15
GPHN-211ENST00000556020 PSMD1Q99460 953 aa22.25■■□□□ 1.15
GPHN-211ENST00000556020 ABCC4O15439 1325 aa22.25■■□□□ 1.15
GPHN-211ENST00000556020 TMX4Q9H1E5 349 aaPredicted RBP22.24■■□□□ 1.15
GPHN-211ENST00000556020 PHAXQ9H814 394 aaKnown RBP22.24■■□□□ 1.15
GPHN-211ENST00000556020 TAF1P21675 1872 aa22.24■■□□□ 1.15
GPHN-211ENST00000556020 DDX60Q8IY21 1712 aaKnown RBP22.23■■□□□ 1.15
GPHN-211ENST00000556020 RTL5Q5HYW3 569 aaPredicted RBP22.23■■□□□ 1.15
GPHN-211ENST00000556020 RIC3Q7Z5B4 369 aa22.23■■□□□ 1.15
GPHN-211ENST00000556020 JDP2Q8WYK2 163 aa22.23■■□□□ 1.15
GPHN-211ENST00000556020 TSR2Q969E8 191 aaKnown RBP22.23■■□□□ 1.15
GPHN-211ENST00000556020 GOLGA2Q08379 1002 aa22.22■■□□□ 1.15
GPHN-211ENST00000556020 ISCA1Q9BUE6 129 aa22.22■■□□□ 1.15
GPHN-211ENST00000556020 SCN4AP35499 1836 aa22.22■■□□□ 1.15
GPHN-211ENST00000556020 COL4A5P29400 1685 aa22.21■■□□□ 1.15
GPHN-211ENST00000556020 POTEIP0CG38 1075 aa22.21■■□□□ 1.15
GPHN-211ENST00000556020 POTEJP0CG39 1038 aa22.21■■□□□ 1.15
GPHN-211ENST00000556020 DDX46Q7L014 1031 aaKnown RBP22.21■■□□□ 1.15
GPHN-211ENST00000556020 LARGE2Q8N3Y3 721 aa22.21■■□□□ 1.15
GPHN-211ENST00000556020 FAM89AQ96GI7 184 aa22.21■■□□□ 1.15
GPHN-211ENST00000556020 IQCA1LA6NCM1 817 aa22.2■■□□□ 1.14
GPHN-211ENST00000556020 DNAJC5GQ8N7S2 189 aa22.2■■□□□ 1.14
GPHN-211ENST00000556020 TSPYL6Q8N831 410 aa22.2■■□□□ 1.14
GPHN-211ENST00000556020 SALL2Q9Y467 1007 aaPredicted RBP22.2■■□□□ 1.14
GPHN-211ENST00000556020 ATP6V0A2Q9Y487 856 aa22.2■■□□□ 1.14
GPHN-211ENST00000556020 FZD9O00144 591 aa22.19■■□□□ 1.14
GPHN-211ENST00000556020 GRIPAP1Q4V328 841 aa22.19■■□□□ 1.14
GPHN-211ENST00000556020 WWC1Q8IX03 1113 aa22.19■■□□□ 1.14
GPHN-211ENST00000556020 L3MBTL3Q96JM7 780 aaPredicted RBP22.19■■□□□ 1.14
GPHN-211ENST00000556020 GJA3Q9Y6H8 435 aa22.19■■□□□ 1.14
GPHN-211ENST00000556020 EIF6P56537 245 aaKnown RBP22.18■■□□□ 1.14
GPHN-211ENST00000556020 EAPPQ56P03 285 aaPredicted RBP22.18■■□□□ 1.14
GPHN-211ENST00000556020 CCDC30Q5VVM6 783 aa22.18■■□□□ 1.14
GPHN-211ENST00000556020 CHADLQ6NUI6 762 aa22.18■■□□□ 1.14
GPHN-211ENST00000556020 MYD88Q99836 296 aa22.18■■□□□ 1.14
GPHN-211ENST00000556020 PPIP5K2O43314 1243 aa22.17■■□□□ 1.14
GPHN-211ENST00000556020 BBOX1O75936 387 aa22.17■■□□□ 1.14
GPHN-211ENST00000556020 GRAPQ13588 217 aa22.17■■□□□ 1.14
GPHN-211ENST00000556020 CCDC27Q2M243 656 aa22.17■■□□□ 1.14
GPHN-211ENST00000556020 GRAPLQ8TC17 118 aaPredicted RBP22.17■■□□□ 1.14
GPHN-211ENST00000556020 TAF1DQ9H5J8 278 aaPredicted RBP22.17■■□□□ 1.14
GPHN-211ENST00000556020 HACL1Q9UJ83 578 aa22.17■■□□□ 1.14
GPHN-211ENST00000556020 AOC3Q16853 763 aa22.16■■□□□ 1.14
GPHN-211ENST00000556020 DPP8Q6V1X1 898 aaPredicted RBP22.16■■□□□ 1.14
GPHN-211ENST00000556020 NIM1KQ8IY84 436 aa22.16■■□□□ 1.14
GPHN-211ENST00000556020 GPC2Q8N158 579 aa22.16■■□□□ 1.14
GPHN-211ENST00000556020 IRS4O14654 1257 aaPredicted RBP22.15■■□□□ 1.14
GPHN-211ENST00000556020 SP8Q8IXZ3 490 aa22.15■■□□□ 1.14
GPHN-211ENST00000556020 CLEC11AQ9Y240 323 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms