RNA–Protein interactions for RNA: ENST00000555867.1

PSEN1-214, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 876 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-214ENST00000555867 TAF1LQ8IZX4 1826 aa8.4□□□□□ -1.06
PSEN1-214ENST00000555867 DOT1LQ8TEK3 1739 aa8.4□□□□□ -1.06
PSEN1-214ENST00000555867 USP54Q70EL1 1684 aa8.4□□□□□ -1.06
PSEN1-214ENST00000555867 PXDNLA1KZ92 1463 aa8.4□□□□□ -1.06
PSEN1-214ENST00000555867 COL3A1P02461 1466 aaPredicted RBP8.4□□□□□ -1.06
PSEN1-214ENST00000555867 SLFN5Q08AF3 891 aa8.4□□□□□ -1.06
PSEN1-214ENST00000555867 E2F4Q16254 413 aa8.4□□□□□ -1.06
PSEN1-214ENST00000555867 DUSP27Q5VZP5 1158 aa8.4□□□□□ -1.06
PSEN1-214ENST00000555867 TRMT2AQ8IZ69 625 aaKnown RBP8.4□□□□□ -1.06
PSEN1-214ENST00000555867 FLAD1Q8NFF5 587 aa8.4□□□□□ -1.06
PSEN1-214ENST00000555867 ARIH1Q9Y4X5 557 aaPredicted RBP8.4□□□□□ -1.06
PSEN1-214ENST00000555867 V9GY48 417 aaPredicted RBP8.4□□□□□ -1.06
PSEN1-214ENST00000555867 KIAA1551Q9HCM1 1747 aa8.4□□□□□ -1.07
PSEN1-214ENST00000555867 TOGARAM1Q9Y4F4 1720 aa8.4□□□□□ -1.07
PSEN1-214ENST00000555867 NRG2O14511 850 aaPredicted RBP8.39□□□□□ -1.07
PSEN1-214ENST00000555867 APAF1O14727 1248 aa8.39□□□□□ -1.07
PSEN1-214ENST00000555867 FOXN1O15353 648 aa8.39□□□□□ -1.07
PSEN1-214ENST00000555867 MTHFSP49914 203 aa8.39□□□□□ -1.07
PSEN1-214ENST00000555867 PPP1R18Q6NYC8 613 aa8.39□□□□□ -1.07
PSEN1-214ENST00000555867 SMC1BQ8NDV3 1235 aa8.39□□□□□ -1.07
PSEN1-214ENST00000555867 RBM27Q9P2N5 1060 aaKnown RBP8.39□□□□□ -1.07
PSEN1-214ENST00000555867 SALL2Q9Y467 1007 aaPredicted RBP8.39□□□□□ -1.07
PSEN1-214ENST00000555867 C5P01031 1676 aa8.39□□□□□ -1.07
PSEN1-214ENST00000555867 UBR3Q6ZT12 1888 aa8.38□□□□□ -1.07
PSEN1-214ENST00000555867 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.38□□□□□ -1.07
PSEN1-214ENST00000555867 GRXCR2A6NFK2 248 aa8.38□□□□□ -1.07
PSEN1-214ENST00000555867 B4GALNT3Q6L9W6 998 aa8.38□□□□□ -1.07
PSEN1-214ENST00000555867 WDR63Q8IWG1 891 aa8.38□□□□□ -1.07
PSEN1-214ENST00000555867 NECTIN2Q92692 538 aa8.38□□□□□ -1.07
PSEN1-214ENST00000555867 TTC21AQ8NDW8 1320 aa8.37□□□□□ -1.07
PSEN1-214ENST00000555867 SBF1O95248 1867 aa8.37□□□□□ -1.07
PSEN1-214ENST00000555867 C3orf80F5H4A9 247 aa8.37□□□□□ -1.07
PSEN1-214ENST00000555867 LCE2BO14633 110 aa8.37□□□□□ -1.07
PSEN1-214ENST00000555867 FYB1O15117 783 aa8.37□□□□□ -1.07
PSEN1-214ENST00000555867 CT47B1P0C2W7 299 aaPredicted RBP8.37□□□□□ -1.07
PSEN1-214ENST00000555867 DPEP1P16444 411 aa8.37□□□□□ -1.07
PSEN1-214ENST00000555867 AAMPQ13685 434 aa8.37□□□□□ -1.07
PSEN1-214ENST00000555867 LTV1Q96GA3 475 aaPredicted RBP8.37□□□□□ -1.07
PSEN1-214ENST00000555867 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.37□□□□□ -1.07
PSEN1-214ENST00000555867 KIF13BQ9NQT8 1826 aa8.37□□□□□ -1.07
PSEN1-214ENST00000555867 LTN1O94822 1766 aa8.37□□□□□ -1.07
PSEN1-214ENST00000555867 C10orf71Q711Q0 1435 aa8.37□□□□□ -1.07
PSEN1-214ENST00000555867 BRCA1P38398 1863 aaKnown RBP8.36□□□□□ -1.07
PSEN1-214ENST00000555867 KDM2BQ8NHM5 1336 aa8.36□□□□□ -1.07
PSEN1-214ENST00000555867 RNF40O75150 1001 aa8.36□□□□□ -1.07
PSEN1-214ENST00000555867 FCHSD2O94868 740 aa8.36□□□□□ -1.07
PSEN1-214ENST00000555867 NEFMP07197 916 aa8.36□□□□□ -1.07
PSEN1-214ENST00000555867 MMP10P09238 476 aa8.36□□□□□ -1.07
PSEN1-214ENST00000555867 KCNA3P22001 575 aa8.36□□□□□ -1.07
PSEN1-214ENST00000555867 TGFB2P61812 414 aa8.36□□□□□ -1.07
PSEN1-214ENST00000555867 NUDT18Q6ZVK8 323 aa8.36□□□□□ -1.07
PSEN1-214ENST00000555867 NME9Q86XW9 330 aa8.36□□□□□ -1.07
PSEN1-214ENST00000555867 WWC1Q8IX03 1113 aa8.36□□□□□ -1.07
PSEN1-214ENST00000555867 CCDC146Q8IYE0 955 aa8.36□□□□□ -1.07
PSEN1-214ENST00000555867 SPRYD3Q8NCJ5 442 aa8.36□□□□□ -1.07
PSEN1-214ENST00000555867 ZCRB1Q8TBF4 217 aaKnown RBP8.36□□□□□ -1.07
PSEN1-214ENST00000555867 MYH16Q9H6N6 1097 aa8.36□□□□□ -1.07
PSEN1-214ENST00000555867 PALLDQ8WX93 1383 aa8.35□□□□□ -1.07
PSEN1-214ENST00000555867 MAPK8IP3Q9UPT6 1336 aa8.35□□□□□ -1.07
PSEN1-214ENST00000555867 C4BP0C0L5 1744 aa8.35□□□□□ -1.07
PSEN1-214ENST00000555867 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.35□□□□□ -1.07
PSEN1-214ENST00000555867 ABHD8Q96I13 439 aa8.35□□□□□ -1.07
PSEN1-214ENST00000555867 AK7Q96M32 723 aa8.35□□□□□ -1.07
PSEN1-214ENST00000555867 PRDM10Q9NQV6 1147 aa8.35□□□□□ -1.07
PSEN1-214ENST00000555867 WDR70Q9NW82 654 aa8.35□□□□□ -1.07
PSEN1-214ENST00000555867 RNF181Q9P0P0 153 aa8.35□□□□□ -1.07
PSEN1-214ENST00000555867 RBM19Q9Y4C8 960 aaKnown RBP8.35□□□□□ -1.07
PSEN1-214ENST00000555867 USP31Q70CQ4 1352 aa8.35□□□□□ -1.07
PSEN1-214ENST00000555867 PLEKHG2Q9H7P9 1386 aa8.35□□□□□ -1.07
PSEN1-214ENST00000555867 PKD1L3Q7Z443 1732 aa8.34□□□□□ -1.07
PSEN1-214ENST00000555867 MEGF6O75095 1541 aa8.34□□□□□ -1.07
PSEN1-214ENST00000555867 IL16Q14005 1332 aa8.34□□□□□ -1.07
PSEN1-214ENST00000555867 FANCIQ9NVI1 1328 aa8.34□□□□□ -1.07
PSEN1-214ENST00000555867 DIAPH1O60610 1272 aaKnown RBP8.34□□□□□ -1.07
PSEN1-214ENST00000555867 U2AF1L5P0DN76 240 aaPredicted RBP8.34□□□□□ -1.07
PSEN1-214ENST00000555867 OSBPP22059 807 aa8.34□□□□□ -1.07
PSEN1-214ENST00000555867 TNNT2P45379 298 aaPredicted RBP8.34□□□□□ -1.07
PSEN1-214ENST00000555867 U2AF1Q01081 240 aaKnown RBP eCLIP8.34□□□□□ -1.07
PSEN1-214ENST00000555867 LINC00116Q8NCU8 138 aa8.34□□□□□ -1.07
PSEN1-214ENST00000555867 ZNF516Q92618 1163 aa8.34□□□□□ -1.07
PSEN1-214ENST00000555867 GGNBP2Q9H3C7 697 aa8.34□□□□□ -1.07
PSEN1-214ENST00000555867 CDHR5Q9HBB8 845 aa8.34□□□□□ -1.07
PSEN1-214ENST00000555867 MKRN1Q9UHC7 482 aaKnown RBP8.34□□□□□ -1.07
PSEN1-214ENST00000555867 RGPD2P0DJD1 1756 aa8.34□□□□□ -1.07
PSEN1-214ENST00000555867 ARFGEF1Q9Y6D6 1849 aa8.33□□□□□ -1.08
PSEN1-214ENST00000555867 TCERG1O14776 1098 aaKnown RBP8.33□□□□□ -1.08
PSEN1-214ENST00000555867 SSFA2P28290 1259 aa8.33□□□□□ -1.08
PSEN1-214ENST00000555867 GGCXP38435 758 aa8.33□□□□□ -1.08
PSEN1-214ENST00000555867 PDE3AQ14432 1141 aa8.33□□□□□ -1.08
PSEN1-214ENST00000555867 MPRIPQ6WCQ1 1025 aa8.33□□□□□ -1.08
PSEN1-214ENST00000555867 EXOC6Q8TAG9 804 aa8.33□□□□□ -1.08
PSEN1-214ENST00000555867 IP6K1Q92551 441 aa8.33□□□□□ -1.08
PSEN1-214ENST00000555867 DCAF5Q96JK2 942 aa8.33□□□□□ -1.08
PSEN1-214ENST00000555867 TNRC6CQ9HCJ0 1690 aaKnown RBP8.33□□□□□ -1.08
PSEN1-214ENST00000555867 FAM208AQ9UK61 1670 aaKnown RBP8.33□□□□□ -1.08
PSEN1-214ENST00000555867 POTECB2RU33 542 aa8.32□□□□□ -1.08
PSEN1-214ENST00000555867 MS4A1P11836 297 aa8.32□□□□□ -1.08
PSEN1-214ENST00000555867 FBLN1P23142 703 aa8.32□□□□□ -1.08
PSEN1-214ENST00000555867 RGS19P49795 217 aa8.32□□□□□ -1.08
PSEN1-214ENST00000555867 LBX1P52954 281 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms