RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 USP17L1Q7RTZ2 530 aa8.66□□□□□ -1.02
ATXN3-233ENST00000555816 TNS4Q8IZW8 715 aa8.66□□□□□ -1.02
ATXN3-233ENST00000555816 DEPDC4Q8N2C3 294 aa8.66□□□□□ -1.02
ATXN3-233ENST00000555816 RBM19Q9Y4C8 960 aaKnown RBP8.66□□□□□ -1.02
ATXN3-233ENST00000555816 PBRM1Q86U86 1689 aa8.65□□□□□ -1.02
ATXN3-233ENST00000555816 ADARB2-AS1A8MUL3 147 aa8.65□□□□□ -1.02
ATXN3-233ENST00000555816 LRRC69Q6ZNQ3 347 aa8.65□□□□□ -1.02
ATXN3-233ENST00000555816 TPCN2Q8NHX9 752 aa8.65□□□□□ -1.02
ATXN3-233ENST00000555816 GAS2L2Q8NHY3 880 aa8.65□□□□□ -1.02
ATXN3-233ENST00000555816 MDFIQ99750 246 aa8.65□□□□□ -1.02
ATXN3-233ENST00000555816 SHROOM2Q13796 1616 aa8.65□□□□□ -1.03
ATXN3-233ENST00000555816 C1QTNF9BB2RNN3 333 aa8.64□□□□□ -1.03
ATXN3-233ENST00000555816 HIF1AQ16665 826 aa8.64□□□□□ -1.03
ATXN3-233ENST00000555816 SYT9Q86SS6 491 aa8.64□□□□□ -1.03
ATXN3-233ENST00000555816 STAG2Q8N3U4 1231 aa8.64□□□□□ -1.03
ATXN3-233ENST00000555816 TNFRSF25Q93038 417 aa8.64□□□□□ -1.03
ATXN3-233ENST00000555816 EFCC1Q9HA90 598 aa8.64□□□□□ -1.03
ATXN3-233ENST00000555816 STRN4Q9NRL3 753 aa8.64□□□□□ -1.03
ATXN3-233ENST00000555816 ADAMTS12P58397 1594 aa8.64□□□□□ -1.03
ATXN3-233ENST00000555816 KCNQ4P56696 695 aa8.63□□□□□ -1.03
ATXN3-233ENST00000555816 CLDN10P78369 228 aa8.63□□□□□ -1.03
ATXN3-233ENST00000555816 CD163Q86VB7 1156 aa8.63□□□□□ -1.03
ATXN3-233ENST00000555816 SIX5Q8N196 739 aa8.63□□□□□ -1.03
ATXN3-233ENST00000555816 OGFOD1Q8N543 542 aa8.63□□□□□ -1.03
ATXN3-233ENST00000555816 RHPN1Q8TCX5 695 aa8.63□□□□□ -1.03
ATXN3-233ENST00000555816 PRDM6Q9NQX0 595 aa8.63□□□□□ -1.03
ATXN3-233ENST00000555816 MKRN1Q9UHC7 482 aaKnown RBP8.63□□□□□ -1.03
ATXN3-233ENST00000555816 MAPKBP1O60336 1514 aa8.63□□□□□ -1.03
ATXN3-233ENST00000555816 ERICH3Q5RHP9 1530 aa8.63□□□□□ -1.03
ATXN3-233ENST00000555816 SPATA31C1P0DKV0 1188 aa8.62□□□□□ -1.03
ATXN3-233ENST00000555816 ADAMTS19Q8TE59 1207 aa8.62□□□□□ -1.03
ATXN3-233ENST00000555816 POM121CA8CG34 1229 aa8.61□□□□□ -1.03
ATXN3-233ENST00000555816 UCN2Q96RP3 112 aa8.61□□□□□ -1.03
ATXN3-233ENST00000555816 PLVAPQ9BX97 442 aa8.61□□□□□ -1.03
ATXN3-233ENST00000555816 KIF13AQ9H1H9 1805 aa8.6□□□□□ -1.03
ATXN3-233ENST00000555816 TSPAN10Q9H1Z9 355 aaPredicted RBP8.6□□□□□ -1.03
ATXN3-233ENST00000555816 KIAA1024Q9UPX6 916 aa8.6□□□□□ -1.03
ATXN3-233ENST00000555816 SUPT5HO00267 1087 aaKnown RBP8.59□□□□□ -1.03
ATXN3-233ENST00000555816 SPEM2Q0P670 501 aa8.59□□□□□ -1.03
ATXN3-233ENST00000555816 PRRT3Q5FWE3 981 aa8.59□□□□□ -1.03
ATXN3-233ENST00000555816 TBCELQ5QJ74 424 aa8.59□□□□□ -1.03
ATXN3-233ENST00000555816 TRIM11Q96F44 468 aa8.59□□□□□ -1.03
ATXN3-233ENST00000555816 KDM6BO15054 1643 aa8.58□□□□□ -1.04
ATXN3-233ENST00000555816 DIP2BQ9P265 1576 aa8.58□□□□□ -1.04
ATXN3-233ENST00000555816 PTPRGP23470 1445 aa8.58□□□□□ -1.04
ATXN3-233ENST00000555816 SFSWAPQ12872 951 aaKnown RBP8.58□□□□□ -1.04
ATXN3-233ENST00000555816 CEP63Q96MT8 703 aa8.58□□□□□ -1.04
ATXN3-233ENST00000555816 PHACTR1Q9C0D0 580 aa8.58□□□□□ -1.04
ATXN3-233ENST00000555816 BRD7Q9NPI1 651 aa8.58□□□□□ -1.04
ATXN3-233ENST00000555816 KCNH4Q9UQ05 1017 aa8.58□□□□□ -1.04
ATXN3-233ENST00000555816 PPP1R12BO60237 982 aaPredicted RBP8.57□□□□□ -1.04
ATXN3-233ENST00000555816 SEC13P55735 322 aa8.57□□□□□ -1.04
ATXN3-233ENST00000555816 SUSD3Q96L08 255 aa8.57□□□□□ -1.04
ATXN3-233ENST00000555816 HCN4Q9Y3Q4 1203 aa8.57□□□□□ -1.04
ATXN3-233ENST00000555816 KIAA0586Q9BVV6 1533 aa8.57□□□□□ -1.04
ATXN3-233ENST00000555816 ATAD2Q6PL18 1390 aa8.57□□□□□ -1.04
ATXN3-233ENST00000555816 TTBK1Q5TCY1 1321 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-233ENST00000555816 SFI1A8K8P3 1242 aa8.56□□□□□ -1.04
ATXN3-233ENST00000555816 DKK1O94907 266 aa8.56□□□□□ -1.04
ATXN3-233ENST00000555816 FURINP09958 794 aa8.56□□□□□ -1.04
ATXN3-233ENST00000555816 CHRNA4P43681 627 aa8.56□□□□□ -1.04
ATXN3-233ENST00000555816 GATA4P43694 442 aa8.56□□□□□ -1.04
ATXN3-233ENST00000555816 SH3PXD2AQ5TCZ1 1133 aa8.56□□□□□ -1.04
ATXN3-233ENST00000555816 TOP2BQ02880 1626 aa8.55□□□□□ -1.04
ATXN3-233ENST00000555816 APBA3O96018 575 aa8.55□□□□□ -1.04
ATXN3-233ENST00000555816 RASA1P20936 1047 aa8.55□□□□□ -1.04
ATXN3-233ENST00000555816 ALDH16A1Q8IZ83 802 aa8.55□□□□□ -1.04
ATXN3-233ENST00000555816 MICALL1Q8N3F8 863 aa8.55□□□□□ -1.04
ATXN3-233ENST00000555816 FNBP4Q8N3X1 1017 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-233ENST00000555816 NACC1Q96RE7 527 aa8.55□□□□□ -1.04
ATXN3-233ENST00000555816 SLC30A3Q99726 388 aa8.55□□□□□ -1.04
ATXN3-233ENST00000555816 C2orf49Q9BVC5 232 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-233ENST00000555816 PLB1Q6P1J6 1458 aa8.54□□□□□ -1.04
ATXN3-233ENST00000555816 M0R082 166 aa8.54□□□□□ -1.04
ATXN3-233ENST00000555816 TYRO3Q06418 890 aa8.54□□□□□ -1.04
ATXN3-233ENST00000555816 TRIM28Q13263 835 aaKnown RBP8.54□□□□□ -1.04
ATXN3-233ENST00000555816 TMEM132AQ24JP5 1023 aa8.54□□□□□ -1.04
ATXN3-233ENST00000555816 IER5Q5VY09 327 aa8.54□□□□□ -1.04
ATXN3-233ENST00000555816 LARP1Q6PKG0 1096 aaKnown RBP8.54□□□□□ -1.04
ATXN3-233ENST00000555816 TSEN2Q8NCE0 465 aaKnown RBP8.54□□□□□ -1.04
ATXN3-233ENST00000555816 ZNF417Q8TAU3 575 aa8.54□□□□□ -1.04
ATXN3-233ENST00000555816 ZNF594Q96JF6 807 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-233ENST00000555816 ZNF587Q96SQ5 575 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-233ENST00000555816 TFIP11Q9UBB9 837 aaKnown RBP8.54□□□□□ -1.04
ATXN3-233ENST00000555816 ADCY10Q96PN6 1610 aa8.54□□□□□ -1.04
ATXN3-233ENST00000555816 ADGRL1O94910 1474 aa8.53□□□□□ -1.04
ATXN3-233ENST00000555816 TNIKQ9UKE5 1360 aa8.53□□□□□ -1.04
ATXN3-233ENST00000555816 C21orf2O43822 256 aa8.53□□□□□ -1.04
ATXN3-233ENST00000555816 ADH7P40394 386 aa8.53□□□□□ -1.04
ATXN3-233ENST00000555816 PROSER2Q86WR7 435 aaPredicted RBP8.53□□□□□ -1.04
ATXN3-233ENST00000555816 GLMNQ92990 594 aa8.53□□□□□ -1.04
ATXN3-233ENST00000555816 C11orf16Q9NQ32 467 aa8.53□□□□□ -1.04
ATXN3-233ENST00000555816 STARD13Q9Y3M8 1113 aa8.53□□□□□ -1.04
ATXN3-233ENST00000555816 MAFBQ9Y5Q3 323 aaPredicted RBP8.53□□□□□ -1.04
ATXN3-233ENST00000555816 ASXL2Q76L83 1435 aa8.53□□□□□ -1.04
ATXN3-233ENST00000555816 BTLAQ7Z6A9 289 aa8.52□□□□□ -1.05
ATXN3-233ENST00000555816 ZNF280CQ8ND82 737 aa8.52□□□□□ -1.05
ATXN3-233ENST00000555816 FBXO41Q8TF61 875 aa8.52□□□□□ -1.05
ATXN3-233ENST00000555816 CARMIL2Q6F5E8 1435 aa8.52□□□□□ -1.05
ATXN3-233ENST00000555816 RUSC2Q8N2Y8 1516 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms