RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	FIGNL1	Q6PIW4	674 aa		7.54	□□□□□ -1.2
KTN1-222	ENST00000555506	STAG2	Q8N3U4	1231 aa		7.54	□□□□□ -1.2
KTN1-222	ENST00000555506	PHACTR1	Q9C0D0	580 aa		7.54	□□□□□ -1.2
KTN1-222	ENST00000555506	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	7.54	□□□□□ -1.2
KTN1-222	ENST00000555506	PHF24	Q9UPV7	400 aa		7.54	□□□□□ -1.2
KTN1-222	ENST00000555506	CHMP3	Q9Y3E7	222 aa		7.54	□□□□□ -1.2
KTN1-222	ENST00000555506	PCDHGC4	Q9Y5F7	938 aa		7.54	□□□□□ -1.2
KTN1-222	ENST00000555506	DCDC2B	A2VCK2	349 aa		7.53	□□□□□ -1.2
KTN1-222	ENST00000555506	ATXN7	O15265	892 aa	Predicted RBP	7.53	□□□□□ -1.2
KTN1-222	ENST00000555506	PRMT3	O60678	531 aa		7.53	□□□□□ -1.2
KTN1-222	ENST00000555506	IGFBP4	P22692	258 aa		7.53	□□□□□ -1.2
KTN1-222	ENST00000555506	OCLN	Q16625	522 aa		7.53	□□□□□ -1.2
KTN1-222	ENST00000555506	LRRC69	Q6ZNQ3	347 aa		7.53	□□□□□ -1.2
KTN1-222	ENST00000555506	RHPN1	Q8TCX5	695 aa		7.53	□□□□□ -1.2
KTN1-222	ENST00000555506	MKL2	Q9ULH7	1088 aa		7.53	□□□□□ -1.2
KTN1-222	ENST00000555506	C2CD2L	O14523	706 aa		7.52	□□□□□ -1.21
KTN1-222	ENST00000555506	FGFR3	P22607	806 aa		7.52	□□□□□ -1.21
KTN1-222	ENST00000555506	WEE1	P30291	646 aa		7.52	□□□□□ -1.21
KTN1-222	ENST00000555506	CTBS	Q01459	385 aa		7.52	□□□□□ -1.21
KTN1-222	ENST00000555506	C1orf53	Q5VUE5	145 aa		7.52	□□□□□ -1.21
KTN1-222	ENST00000555506	NBPF11	Q86T75	865 aa		7.52	□□□□□ -1.21
KTN1-222	ENST00000555506	ALDH16A1	Q8IZ83	802 aa		7.52	□□□□□ -1.21
KTN1-222	ENST00000555506	CXXC1	Q9P0U4	656 aa	Predicted RBP	7.52	□□□□□ -1.21
KTN1-222	ENST00000555506	GJA3	Q9Y6H8	435 aa		7.52	□□□□□ -1.21
KTN1-222	ENST00000555506	MAPT	P10636	758 aa	Known RBP	7.51	□□□□□ -1.21
KTN1-222	ENST00000555506	TNP2	Q05952	138 aa		7.51	□□□□□ -1.21
KTN1-222	ENST00000555506	ACD	Q96AP0	544 aa		7.51	□□□□□ -1.21
KTN1-222	ENST00000555506	NGLY1	Q96IV0	654 aa		7.51	□□□□□ -1.21
KTN1-222	ENST00000555506	HSH2D	Q96JZ2	352 aa		7.51	□□□□□ -1.21
KTN1-222	ENST00000555506	SEMA6B	Q9H3T3	888 aa		7.51	□□□□□ -1.21
KTN1-222	ENST00000555506	KHNYN	O15037	678 aa	Known RBP	7.5	□□□□□ -1.21
KTN1-222	ENST00000555506	SAMD5	Q5TGI4	173 aa		7.5	□□□□□ -1.21
KTN1-222	ENST00000555506	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	7.5	□□□□□ -1.21
KTN1-222	ENST00000555506	PRIMPOL	Q96LW4	560 aa		7.5	□□□□□ -1.21
KTN1-222	ENST00000555506	NSFL1C	Q9UNZ2	370 aa	Known RBP	7.5	□□□□□ -1.21
KTN1-222	ENST00000555506	GPC6	Q9Y625	555 aa	Predicted RBP	7.5	□□□□□ -1.21
KTN1-222	ENST00000555506	SOWAHD	A6NJG2	315 aa		7.49	□□□□□ -1.21
KTN1-222	ENST00000555506	FAM157B	P0CG42	384 aa		7.49	□□□□□ -1.21
KTN1-222	ENST00000555506	SCNN1A	P37088	669 aa		7.49	□□□□□ -1.21
KTN1-222	ENST00000555506	SERPINB4	P48594	390 aa		7.49	□□□□□ -1.21
KTN1-222	ENST00000555506	ZNF280C	Q8ND82	737 aa		7.49	□□□□□ -1.21
KTN1-222	ENST00000555506	STRN4	Q9NRL3	753 aa		7.49	□□□□□ -1.21
KTN1-222	ENST00000555506	PIK3R2	O00459	728 aa		7.49	□□□□□ -1.21
KTN1-222	ENST00000555506	EFS	O43281	561 aa		7.49	□□□□□ -1.21
KTN1-222	ENST00000555506	BMP4	P12644	408 aa		7.49	□□□□□ -1.21
KTN1-222	ENST00000555506	CD33	P20138	364 aa		7.49	□□□□□ -1.21
KTN1-222	ENST00000555506	MAP2K3	P46734	347 aa		7.49	□□□□□ -1.21
KTN1-222	ENST00000555506	SUSD3	Q96L08	255 aa		7.49	□□□□□ -1.21
KTN1-222	ENST00000555506	NEUROD4	Q9HD90	331 aa		7.49	□□□□□ -1.21
KTN1-222	ENST00000555506	FOXO3	O43524	673 aa		7.48	□□□□□ -1.21
KTN1-222	ENST00000555506	ZFP64	Q9NPA5	681 aa		7.48	□□□□□ -1.21
KTN1-222	ENST00000555506	FKBP5	Q13451	457 aa	Predicted RBP	7.47	□□□□□ -1.21
KTN1-222	ENST00000555506	GRIN2C	Q14957	1233 aa		7.47	□□□□□ -1.21
KTN1-222	ENST00000555506	OXCT2	Q9BYC2	517 aa	Predicted RBP	7.47	□□□□□ -1.21
KTN1-222	ENST00000555506	ITGB7	P26010	798 aa		7.46	□□□□□ -1.22
KTN1-222	ENST00000555506	RTN1	Q16799	776 aa		7.46	□□□□□ -1.22
KTN1-222	ENST00000555506	FAM182B	Q5T319	152 aa		7.46	□□□□□ -1.22
KTN1-222	ENST00000555506	C1orf229	Q6ZS94	237 aa	Predicted RBP	7.46	□□□□□ -1.22
KTN1-222	ENST00000555506	QTRT2	Q9H974	415 aa	Known RBP	7.46	□□□□□ -1.22
KTN1-222	ENST00000555506	ANKIB1	Q9P2G1	1089 aa		7.46	□□□□□ -1.22
KTN1-222	ENST00000555506	EGFL7	Q9UHF1	273 aa		7.46	□□□□□ -1.22
KTN1-222	ENST00000555506	SFSWAP	Q12872	951 aa	Known RBP	7.45	□□□□□ -1.22
KTN1-222	ENST00000555506	MARK1	Q9P0L2	795 aa		7.45	□□□□□ -1.22
KTN1-222	ENST00000555506	BCS1L	Q9Y276	419 aa		7.45	□□□□□ -1.22
KTN1-222	ENST00000555506	AMOTL2	Q9Y2J4	779 aa		7.45	□□□□□ -1.22
KTN1-222	ENST00000555506	OIP5	O43482	229 aa		7.44	□□□□□ -1.22
KTN1-222	ENST00000555506	TYRO3	Q06418	890 aa		7.44	□□□□□ -1.22
KTN1-222	ENST00000555506	KLK14	Q9P0G3	267 aa		7.44	□□□□□ -1.22
KTN1-222	ENST00000555506	KLF15	Q9UIH9	416 aa		7.44	□□□□□ -1.22
KTN1-222	ENST00000555506	GGA1	Q9UJY5	639 aa		7.44	□□□□□ -1.22
KTN1-222	ENST00000555506	ARID1B	Q8NFD5	2236 aa	Predicted RBP	7.43	□□□□□ -1.22
KTN1-222	ENST00000555506	PTCD1	O75127	700 aa	Known RBP	7.43	□□□□□ -1.22
KTN1-222	ENST00000555506	ABL1	P00519	1130 aa		7.43	□□□□□ -1.22
KTN1-222	ENST00000555506	LAMC2	Q13753	1193 aa		7.43	□□□□□ -1.22
KTN1-222	ENST00000555506	ARTN	Q5T4W7	220 aa		7.43	□□□□□ -1.22
KTN1-222	ENST00000555506	BTLA	Q7Z6A9	289 aa		7.43	□□□□□ -1.22
KTN1-222	ENST00000555506	COL26A1	Q96A83	441 aa		7.43	□□□□□ -1.22
KTN1-222	ENST00000555506	VTI1A	Q96AJ9	217 aa		7.43	□□□□□ -1.22
KTN1-222	ENST00000555506	CEP63	Q96MT8	703 aa		7.43	□□□□□ -1.22
KTN1-222	ENST00000555506	MKNK1	Q9BUB5	465 aa		7.43	□□□□□ -1.22
KTN1-222	ENST00000555506	BRD7	Q9NPI1	651 aa		7.43	□□□□□ -1.22
KTN1-222	ENST00000555506	LRFN2	Q9ULH4	789 aa		7.43	□□□□□ -1.22
KTN1-222	ENST00000555506	C1QTNF9B	B2RNN3	333 aa		7.43	□□□□□ -1.22
KTN1-222	ENST00000555506	SHISA8	B8ZZ34	492 aa		7.43	□□□□□ -1.22
KTN1-222	ENST00000555506	ARAF	P10398	606 aa		7.43	□□□□□ -1.22
KTN1-222	ENST00000555506	RBM25	P49756	843 aa	Known RBP	7.43	□□□□□ -1.22
KTN1-222	ENST00000555506	CAPN12	Q6ZSI9	719 aa		7.43	□□□□□ -1.22
KTN1-222	ENST00000555506	GOLGA6L1	Q8N7Z2	621 aa		7.43	□□□□□ -1.22
KTN1-222	ENST00000555506	GTF3C2	Q8WUA4	911 aa	Predicted RBP	7.43	□□□□□ -1.22
KTN1-222	ENST00000555506	MYO19	Q96H55	970 aa		7.43	□□□□□ -1.22
KTN1-222	ENST00000555506	BIN2	Q9UBW5	565 aa	Predicted RBP	7.43	□□□□□ -1.22
KTN1-222	ENST00000555506	SEPT3	Q9UH03	358 aa		7.43	□□□□□ -1.22
KTN1-222	ENST00000555506	DMGDH	Q9UI17	866 aa	Known RBP	7.43	□□□□□ -1.22
KTN1-222	ENST00000555506	GDF2	Q9UK05	429 aa	Predicted RBP	7.43	□□□□□ -1.22
KTN1-222	ENST00000555506	TGFBR3L	H3BV60	316 aa		7.42	□□□□□ -1.22
KTN1-222	ENST00000555506	ICMT	O60725	284 aa		7.42	□□□□□ -1.22
KTN1-222	ENST00000555506	ERCC3	P19447	782 aa		7.42	□□□□□ -1.22
KTN1-222	ENST00000555506	SNRPN	P63162	240 aa	Known RBP	7.42	□□□□□ -1.22
KTN1-222	ENST00000555506	ZNF211	Q13398	564 aa	Predicted RBP	7.42	□□□□□ -1.22
KTN1-222	ENST00000555506	DGKZ	Q13574	1117 aa		7.42	□□□□□ -1.22

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