RNA–Protein interactions for RNA: ENST00000555233.5

PRKCH-214, Transcript of protein kinase C eta, humanhuman

TSL 2

Gene PRKCH, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-214ENST00000555233 CCNL1Q9UK58 526 aaPredicted RBP8.07□□□□□ -1.12
PRKCH-214ENST00000555233 CACNA1SQ13698 1873 aa8.06□□□□□ -1.12
PRKCH-214ENST00000555233 VAMP4O75379 141 aa8.06□□□□□ -1.12
PRKCH-214ENST00000555233 PIP4K2AP48426 406 aaPredicted RBP8.06□□□□□ -1.12
PRKCH-214ENST00000555233 EIF5P55010 431 aaKnown RBP8.06□□□□□ -1.12
PRKCH-214ENST00000555233 EFCAB3Q8N7B9 438 aa8.06□□□□□ -1.12
PRKCH-214ENST00000555233 RTF1Q92541 710 aaKnown RBP8.06□□□□□ -1.12
PRKCH-214ENST00000555233 DDRGK1Q96HY6 314 aa8.06□□□□□ -1.12
PRKCH-214ENST00000555233 TSPYL4Q9UJ04 414 aa8.06□□□□□ -1.12
PRKCH-214ENST00000555233 SALL2Q9Y467 1007 aaPredicted RBP8.06□□□□□ -1.12
PRKCH-214ENST00000555233 A1BGP04217 495 aa8.05□□□□□ -1.12
PRKCH-214ENST00000555233 HOXB7P09629 217 aa8.05□□□□□ -1.12
PRKCH-214ENST00000555233 ATP6V1AP38606 617 aa8.05□□□□□ -1.12
PRKCH-214ENST00000555233 MLLT3P42568 568 aaPredicted RBP8.05□□□□□ -1.12
PRKCH-214ENST00000555233 GNAI1P63096 354 aa8.05□□□□□ -1.12
PRKCH-214ENST00000555233 EXOSC9Q06265 439 aaKnown RBP8.05□□□□□ -1.12
PRKCH-214ENST00000555233 SLC15A2Q16348 729 aa8.05□□□□□ -1.12
PRKCH-214ENST00000555233 ASTLQ6HA08 431 aaPredicted RBP8.05□□□□□ -1.12
PRKCH-214ENST00000555233 COL23A1Q86Y22 540 aaPredicted RBP8.05□□□□□ -1.12
PRKCH-214ENST00000555233 FMNL2Q96PY5 1086 aa8.05□□□□□ -1.12
PRKCH-214ENST00000555233 COL15A1P39059 1388 aa8.05□□□□□ -1.12
PRKCH-214ENST00000555233 PXDNLA1KZ92 1463 aa8.05□□□□□ -1.12
PRKCH-214ENST00000555233 RPS6KA4O75676 772 aa8.04□□□□□ -1.12
PRKCH-214ENST00000555233 ANXA1P04083 346 aa8.04□□□□□ -1.12
PRKCH-214ENST00000555233 HNRNPUQ00839 825 aaKnown RBP eCLIP8.04□□□□□ -1.12
PRKCH-214ENST00000555233 GOLGA2Q08379 1002 aa8.04□□□□□ -1.12
PRKCH-214ENST00000555233 FAM117AQ9C073 453 aa8.04□□□□□ -1.12
PRKCH-214ENST00000555233 CRISPLD2Q9H0B8 497 aa8.04□□□□□ -1.12
PRKCH-214ENST00000555233 CCDC87Q9NVE4 849 aa8.04□□□□□ -1.12
PRKCH-214ENST00000555233 ADCY9O60503 1353 aa8.04□□□□□ -1.12
PRKCH-214ENST00000555233 GOLGB1Q14789 3259 aaKnown RBP8.04□□□□□ -1.12
PRKCH-214ENST00000555233 ERBB4Q15303 1308 aa8.03□□□□□ -1.12
PRKCH-214ENST00000555233 LRRC37AA6NMS7 1700 aa8.03□□□□□ -1.12
PRKCH-214ENST00000555233 LTBP1Q14766 1721 aa8.03□□□□□ -1.12
PRKCH-214ENST00000555233 ARFGEF1Q9Y6D6 1849 aa8.03□□□□□ -1.12
PRKCH-214ENST00000555233 SNRPA1P09661 255 aaKnown RBP8.03□□□□□ -1.12
PRKCH-214ENST00000555233 PTGER2P43116 358 aa8.03□□□□□ -1.12
PRKCH-214ENST00000555233 CAMK2BQ13554 666 aa8.03□□□□□ -1.12
PRKCH-214ENST00000555233 G2E3Q7L622 706 aa8.03□□□□□ -1.12
PRKCH-214ENST00000555233 ZNF646O15015 1829 aaPredicted RBP8.03□□□□□ -1.12
PRKCH-214ENST00000555233 ATP10DQ9P241 1426 aa8.03□□□□□ -1.12
PRKCH-214ENST00000555233 USP42Q9H9J4 1324 aaKnown RBP8.03□□□□□ -1.12
PRKCH-214ENST00000555233 CARMIL3Q8ND23 1372 aa8.02□□□□□ -1.13
PRKCH-214ENST00000555233 SPEF2Q9C093 1822 aa8.02□□□□□ -1.13
PRKCH-214ENST00000555233 E9PSI1 815 aa8.02□□□□□ -1.13
PRKCH-214ENST00000555233 CAMTA2O94983 1202 aa8.02□□□□□ -1.13
PRKCH-214ENST00000555233 TTLL7Q6ZT98 887 aa8.02□□□□□ -1.13
PRKCH-214ENST00000555233 CCDC82Q8N4S0 544 aa8.02□□□□□ -1.13
PRKCH-214ENST00000555233 CHPF2Q9P2E5 772 aa8.02□□□□□ -1.13
PRKCH-214ENST00000555233 C10orf71Q711Q0 1435 aa8.02□□□□□ -1.13
PRKCH-214ENST00000555233 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.01□□□□□ -1.13
PRKCH-214ENST00000555233 PSDA5PKW4 1024 aaPredicted RBP8.01□□□□□ -1.13
PRKCH-214ENST00000555233 GNPATO15228 680 aa8.01□□□□□ -1.13
PRKCH-214ENST00000555233 NEFMP07197 916 aa8.01□□□□□ -1.13
PRKCH-214ENST00000555233 GYS1P13807 737 aa8.01□□□□□ -1.13
PRKCH-214ENST00000555233 SSFA2P28290 1259 aa8.01□□□□□ -1.13
PRKCH-214ENST00000555233 IL6STP40189 918 aaPredicted RBP8.01□□□□□ -1.13
PRKCH-214ENST00000555233 R3HDM1Q15032 1099 aaKnown RBP8.01□□□□□ -1.13
PRKCH-214ENST00000555233 TWISTNBQ3B726 338 aaPredicted RBP8.01□□□□□ -1.13
PRKCH-214ENST00000555233 TTC5Q8N0Z6 440 aa8.01□□□□□ -1.13
PRKCH-214ENST00000555233 SRP68Q9UHB9 627 aaKnown RBP8.01□□□□□ -1.13
PRKCH-214ENST00000555233 UBN2Q6ZU65 1347 aa8.01□□□□□ -1.13
PRKCH-214ENST00000555233 ELL2O00472 640 aaPredicted RBP8□□□□□ -1.13
PRKCH-214ENST00000555233 CALD1Q05682 793 aaKnown RBP8□□□□□ -1.13
PRKCH-214ENST00000555233 DDR1Q08345 913 aa8□□□□□ -1.13
PRKCH-214ENST00000555233 SSH1Q8WYL5 1049 aa8□□□□□ -1.13
PRKCH-214ENST00000555233 PHAXQ9H814 394 aaKnown RBP8□□□□□ -1.13
PRKCH-214ENST00000555233 DDX21Q9NR30 783 aaKnown RBP eCLIP8□□□□□ -1.13
PRKCH-214ENST00000555233 TNNQ9UQP3 1299 aa8□□□□□ -1.13
PRKCH-214ENST00000555233 SNED1Q8TER0 1413 aa8□□□□□ -1.13
PRKCH-214ENST00000555233 IBTKQ9P2D0 1353 aaPredicted RBP7.99□□□□□ -1.13
PRKCH-214ENST00000555233 SLX4Q8IY92 1834 aa7.99□□□□□ -1.13
PRKCH-214ENST00000555233 TCERG1O14776 1098 aaKnown RBP7.99□□□□□ -1.13
PRKCH-214ENST00000555233 ATMINO43313 823 aaPredicted RBP7.99□□□□□ -1.13
PRKCH-214ENST00000555233 SBF1O95248 1867 aa7.99□□□□□ -1.13
PRKCH-214ENST00000555233 TM4SF1P30408 202 aa7.99□□□□□ -1.13
PRKCH-214ENST00000555233 RARSP54136 660 aaKnown RBP7.99□□□□□ -1.13
PRKCH-214ENST00000555233 HLFQ16534 295 aa7.99□□□□□ -1.13
PRKCH-214ENST00000555233 FER1L6Q2WGJ9 1857 aa7.99□□□□□ -1.13
PRKCH-214ENST00000555233 RIC1Q4ADV7 1423 aa7.99□□□□□ -1.13
PRKCH-214ENST00000555233 MRPL50Q8N5N7 158 aaKnown RBP7.99□□□□□ -1.13
PRKCH-214ENST00000555233 NARFQ9UHQ1 456 aa7.99□□□□□ -1.13
PRKCH-214ENST00000555233 LAS1LQ9Y4W2 734 aaKnown RBP7.99□□□□□ -1.13
PRKCH-214ENST00000555233 UTRNP46939 3433 aa7.99□□□□□ -1.13
PRKCH-214ENST00000555233 ABCC12Q96J65 1359 aa7.98□□□□□ -1.13
PRKCH-214ENST00000555233 CANXP27824 592 aaKnown RBP7.98□□□□□ -1.13
PRKCH-214ENST00000555233 SF3B2Q13435 895 aaKnown RBP7.98□□□□□ -1.13
PRKCH-214ENST00000555233 HDGFL1Q5TGJ6 251 aa7.98□□□□□ -1.13
PRKCH-214ENST00000555233 NECTIN2Q92692 538 aa7.98□□□□□ -1.13
PRKCH-214ENST00000555233 TEX13AQ9BXU3 409 aaPredicted RBP7.98□□□□□ -1.13
PRKCH-214ENST00000555233 MYH16Q9H6N6 1097 aa7.98□□□□□ -1.13
PRKCH-214ENST00000555233 RNF123Q5XPI4 1314 aa7.98□□□□□ -1.13
PRKCH-214ENST00000555233 MAP3K15Q6ZN16 1313 aa7.98□□□□□ -1.13
PRKCH-214ENST00000555233 CCDC88AQ3V6T2 1871 aa7.98□□□□□ -1.13
PRKCH-214ENST00000555233 A6NJR5 290 aa7.97□□□□□ -1.13
PRKCH-214ENST00000555233 STARD3NLO95772 234 aa7.97□□□□□ -1.13
PRKCH-214ENST00000555233 IGKV5-2P06315 115 aa7.97□□□□□ -1.13
PRKCH-214ENST00000555233 XAGE3Q8WTP9 111 aa7.97□□□□□ -1.13
PRKCH-214ENST00000555233 ISCA1Q9BUE6 129 aa7.97□□□□□ -1.13
PRKCH-214ENST00000555233 STK32BQ9NY57 414 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms