RNA–Protein interactions for RNA: ENST00000554986.2

SIX1-203, Transcript of SIX homeobox 1, humanhuman

TSL 3 BASIC

Gene SIX1, Length 1,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-203ENST00000554986 ZBTB1Q9Y2K1 713 aa16.24■□□□□ 0.19
SIX1-203ENST00000554986 STARD3NLO95772 234 aa16.24■□□□□ 0.19
SIX1-203ENST00000554986 AKT1S1Q96B36 256 aa16.24■□□□□ 0.19
SIX1-203ENST00000554986 NBPF26B4DH59 902 aa16.23■□□□□ 0.19
SIX1-203ENST00000554986 CD2BP2O95400 341 aaKnown RBP16.23■□□□□ 0.19
SIX1-203ENST00000554986 ZSCAN23Q3MJ62 389 aa16.23■□□□□ 0.19
SIX1-203ENST00000554986 HDGFL1Q5TGJ6 251 aa16.23■□□□□ 0.19
SIX1-203ENST00000554986 NBPF14Q5TI25 921 aa16.23■□□□□ 0.19
SIX1-203ENST00000554986 NBPF10Q6P3W6 841 aaKnown RBP16.23■□□□□ 0.19
SIX1-203ENST00000554986 ITPRIPQ8IWB1 547 aa16.23■□□□□ 0.19
SIX1-203ENST00000554986 NBPF15Q8N660 670 aa16.23■□□□□ 0.19
SIX1-203ENST00000554986 CCDC87Q9NVE4 849 aa16.23■□□□□ 0.19
SIX1-203ENST00000554986 RC3H1Q5TC82 1133 aaKnown RBP16.22■□□□□ 0.19
SIX1-203ENST00000554986 LMBRD1Q9NUN5 540 aa16.22■□□□□ 0.19
SIX1-203ENST00000554986 CCDC39Q9UFE4 941 aa16.22■□□□□ 0.19
SIX1-203ENST00000554986 IPO8O15397 1037 aaKnown RBP16.22■□□□□ 0.19
SIX1-203ENST00000554986 PDIA6Q15084 440 aa16.22■□□□□ 0.19
SIX1-203ENST00000554986 GCC1Q96CN9 775 aa16.22■□□□□ 0.19
SIX1-203ENST00000554986 GNPATO15228 680 aa16.21■□□□□ 0.19
SIX1-203ENST00000554986 ANXA1P04083 346 aa16.21■□□□□ 0.19
SIX1-203ENST00000554986 PROSER3Q2NL68 480 aa16.21■□□□□ 0.19
SIX1-203ENST00000554986 SSH1Q8WYL5 1049 aa16.21■□□□□ 0.19
SIX1-203ENST00000554986 AK7Q96M32 723 aa16.21■□□□□ 0.19
SIX1-203ENST00000554986 CHMP4BQ9H444 224 aaKnown RBP16.21■□□□□ 0.19
SIX1-203ENST00000554986 SOS1Q07889 1333 aaPredicted RBP16.21■□□□□ 0.19
SIX1-203ENST00000554986 BRPF1P55201 1214 aaPredicted RBP16.2■□□□□ 0.18
SIX1-203ENST00000554986 RABEP1Q15276 862 aa16.2■□□□□ 0.18
SIX1-203ENST00000554986 SLC15A2Q16348 729 aa16.2■□□□□ 0.18
SIX1-203ENST00000554986 RBSNQ9H1K0 784 aa16.2■□□□□ 0.18
SIX1-203ENST00000554986 CWC22Q9HCG8 908 aaKnown RBP16.2■□□□□ 0.18
SIX1-203ENST00000554986 CHPF2Q9P2E5 772 aa16.2■□□□□ 0.18
SIX1-203ENST00000554986 MYL6BP14649 208 aa16.19■□□□□ 0.18
SIX1-203ENST00000554986 ALDH1L2Q3SY69 923 aa16.19■□□□□ 0.18
SIX1-203ENST00000554986 TBC1D9Q6ZT07 1266 aa16.19■□□□□ 0.18
SIX1-203ENST00000554986 LRP10Q7Z4F1 713 aa16.19■□□□□ 0.18
SIX1-203ENST00000554986 TMEM57Q8N5G2 664 aa16.19■□□□□ 0.18
SIX1-203ENST00000554986 CCDC94Q9BW85 323 aaPredicted RBP16.19■□□□□ 0.18
SIX1-203ENST00000554986 STK32BQ9NY57 414 aa16.19■□□□□ 0.18
SIX1-203ENST00000554986 QSER1Q2KHR3 1735 aa16.19■□□□□ 0.18
SIX1-203ENST00000554986 RPS6KA4O75676 772 aa16.18■□□□□ 0.18
SIX1-203ENST00000554986 LNPKQ9C0E8 428 aa16.18■□□□□ 0.18
SIX1-203ENST00000554986 TFCP2L1Q9NZI6 479 aa16.18■□□□□ 0.18
SIX1-203ENST00000554986 C4AP0C0L4 1744 aa16.18■□□□□ 0.18
SIX1-203ENST00000554986 PHF14O94880 888 aa16.18■□□□□ 0.18
SIX1-203ENST00000554986 EIF5P55010 431 aaKnown RBP16.18■□□□□ 0.18
SIX1-203ENST00000554986 CCDC30Q5VVM6 783 aa16.18■□□□□ 0.18
SIX1-203ENST00000554986 DMTNQ08495 405 aa16.17■□□□□ 0.18
SIX1-203ENST00000554986 CAVIN1Q6NZI2 390 aaKnown RBP16.17■□□□□ 0.18
SIX1-203ENST00000554986 LRSAM1Q6UWE0 723 aa16.17■□□□□ 0.18
SIX1-203ENST00000554986 ZNF428Q96B54 188 aa16.17■□□□□ 0.18
SIX1-203ENST00000554986 DDX21Q9NR30 783 aaKnown RBP eCLIP16.17■□□□□ 0.18
SIX1-203ENST00000554986 NOB1Q9ULX3 412 aaKnown RBP16.17■□□□□ 0.18
SIX1-203ENST00000554986 RTCBQ9Y3I0 505 aaKnown RBP16.17■□□□□ 0.18
SIX1-203ENST00000554986 ZNF330Q9Y3S2 320 aaPredicted RBP16.17■□□□□ 0.18
SIX1-203ENST00000554986 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.17■□□□□ 0.18
SIX1-203ENST00000554986 HMGB2P26583 209 aaKnown RBP16.17■□□□□ 0.18
SIX1-203ENST00000554986 IL6STP40189 918 aaPredicted RBP16.17■□□□□ 0.18
SIX1-203ENST00000554986 DBF4Q9UBU7 674 aaPredicted RBP16.17■□□□□ 0.18
SIX1-203ENST00000554986 PNPLA7Q6ZV29 1317 aa16.16■□□□□ 0.18
SIX1-203ENST00000554986 COL15A1P39059 1388 aa16.16■□□□□ 0.18
SIX1-203ENST00000554986 CDC45O75419 566 aa16.16■□□□□ 0.18
SIX1-203ENST00000554986 MCTP1Q6DN14 999 aa16.16■□□□□ 0.18
SIX1-203ENST00000554986 PDGFDQ9GZP0 370 aaPredicted RBP16.16■□□□□ 0.18
SIX1-203ENST00000554986 CACNA1FO60840 1977 aa16.15■□□□□ 0.18
SIX1-203ENST00000554986 SLC4A2P04920 1241 aa16.15■□□□□ 0.18
SIX1-203ENST00000554986 R3HDM1Q15032 1099 aaKnown RBP16.15■□□□□ 0.18
SIX1-203ENST00000554986 COL23A1Q86Y22 540 aaPredicted RBP16.15■□□□□ 0.18
SIX1-203ENST00000554986 MYRIPQ8NFW9 859 aa16.15■□□□□ 0.18
SIX1-203ENST00000554986 ARHGEF1Q92888 912 aaKnown RBP16.15■□□□□ 0.18
SIX1-203ENST00000554986 PHAXQ9H814 394 aaKnown RBP16.15■□□□□ 0.18
SIX1-203ENST00000554986 PSDA5PKW4 1024 aaPredicted RBP16.14■□□□□ 0.17
SIX1-203ENST00000554986 GTF2F1P35269 517 aaKnown RBP eCLIP16.14■□□□□ 0.17
SIX1-203ENST00000554986 G2E3Q7L622 706 aa16.14■□□□□ 0.17
SIX1-203ENST00000554986 PRIMPOLQ96LW4 560 aa16.14■□□□□ 0.17
SIX1-203ENST00000554986 STK31Q9BXU1 1019 aa16.14■□□□□ 0.17
SIX1-203ENST00000554986 FOXD4L1Q9NU39 408 aa16.14■□□□□ 0.17
SIX1-203ENST00000554986 TRAPPC3LQ5T215 181 aa16.13■□□□□ 0.17
SIX1-203ENST00000554986 TTLL7Q6ZT98 887 aa16.13■□□□□ 0.17
SIX1-203ENST00000554986 TBC1D2BQ9UPU7 963 aa16.13■□□□□ 0.17
SIX1-203ENST00000554986 AIMP1Q12904 312 aaKnown RBP16.13■□□□□ 0.17
SIX1-203ENST00000554986 COPS6Q7L5N1 327 aa16.13■□□□□ 0.17
SIX1-203ENST00000554986 MRPL50Q8N5N7 158 aaKnown RBP16.13■□□□□ 0.17
SIX1-203ENST00000554986 XAGE3Q8WTP9 111 aa16.13■□□□□ 0.17
SIX1-203ENST00000554986 CHMP4AQ9BY43 222 aa16.13■□□□□ 0.17
SIX1-203ENST00000554986 HYPKQ9NX55 129 aa16.13■□□□□ 0.17
SIX1-203ENST00000554986 CASZ1Q86V15 1759 aa16.12■□□□□ 0.17
SIX1-203ENST00000554986 MBD3O95983 291 aa16.12■□□□□ 0.17
SIX1-203ENST00000554986 ADRA2BP18089 450 aa16.12■□□□□ 0.17
SIX1-203ENST00000554986 NCLP19338 710 aaKnown RBP16.12■□□□□ 0.17
SIX1-203ENST00000554986 GTPBP4Q9BZE4 634 aaKnown RBP16.12■□□□□ 0.17
SIX1-203ENST00000554986 SRP68Q9UHB9 627 aaKnown RBP16.12■□□□□ 0.17
SIX1-203ENST00000554986 BCORQ6W2J9 1755 aa16.12■□□□□ 0.17
SIX1-203ENST00000554986 HMGN5P82970 282 aaKnown RBP16.11■□□□□ 0.17
SIX1-203ENST00000554986 GPT2Q8TD30 523 aa16.11■□□□□ 0.17
SIX1-203ENST00000554986 ARHGAP45Q92619 1136 aa16.11■□□□□ 0.17
SIX1-203ENST00000554986 SCN7AQ01118 1682 aa16.11■□□□□ 0.17
SIX1-203ENST00000554986 AK9Q5TCS8 1911 aa16.11■□□□□ 0.17
SIX1-203ENST00000554986 ZSCAN20P17040 1043 aaPredicted RBP16.11■□□□□ 0.17
SIX1-203ENST00000554986 KIAA2012Q0VF49 1180 aa16.11■□□□□ 0.17
SIX1-203ENST00000554986 DZIP3Q86Y13 1208 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms