RNA–Protein interactions for RNA: ENST00000554929.1

SRSF5-208, Transcript of serine and arginine rich splicing factor 5, human

TSL 2

Gene SRSF5, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRSF5-208	ENST00000554929	GGNBP2	Q9H3C7	697 aa		13.63	□□□□□ -0.23
SRSF5-208	ENST00000554929	HACL1	Q9UJ83	578 aa		13.63	□□□□□ -0.23
SRSF5-208	ENST00000554929	ZNF831	Q5JPB2	1677 aa		13.63	□□□□□ -0.23
SRSF5-208	ENST00000554929	EPHX2	P34913	555 aa		13.62	□□□□□ -0.23
SRSF5-208	ENST00000554929	FER1L6	Q2WGJ9	1857 aa		13.61	□□□□□ -0.23
SRSF5-208	ENST00000554929	FLT4	P35916	1363 aa		13.61	□□□□□ -0.23
SRSF5-208	ENST00000554929	SNPH	O15079	494 aa		13.61	□□□□□ -0.23
SRSF5-208	ENST00000554929	AOC2	O75106	756 aa		13.61	□□□□□ -0.23
SRSF5-208	ENST00000554929	FBXO22	Q8NEZ5	403 aa		13.61	□□□□□ -0.23
SRSF5-208	ENST00000554929	PANK3	Q9H999	370 aa		13.61	□□□□□ -0.23
SRSF5-208	ENST00000554929	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
SRSF5-208	ENST00000554929	TAOK2	Q9UL54	1235 aa		13.6	□□□□□ -0.23
SRSF5-208	ENST00000554929	RNF123	Q5XPI4	1314 aa		13.6	□□□□□ -0.23
SRSF5-208	ENST00000554929	LTBP3	Q9NS15	1303 aa		13.6	□□□□□ -0.23
SRSF5-208	ENST00000554929	NPC1L1	Q9UHC9	1359 aa		13.59	□□□□□ -0.23
SRSF5-208	ENST00000554929	ERVV-2	B6SEH9	535 aa		13.59	□□□□□ -0.23
SRSF5-208	ENST00000554929	CA12	O43570	354 aa		13.59	□□□□□ -0.23
SRSF5-208	ENST00000554929	FMR1	Q06787	632 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
SRSF5-208	ENST00000554929	PNMA8A	Q86V59	439 aa	Predicted RBP	13.59	□□□□□ -0.23
SRSF5-208	ENST00000554929	THSD7B	Q9C0I4	1608 aa		13.59	□□□□□ -0.23
SRSF5-208	ENST00000554929	CARMIL3	Q8ND23	1372 aa		13.58	□□□□□ -0.23
SRSF5-208	ENST00000554929	FYB1	O15117	783 aa		13.58	□□□□□ -0.24
SRSF5-208	ENST00000554929	MAP2K2	P36507	400 aa		13.58	□□□□□ -0.24
SRSF5-208	ENST00000554929	CABP4	P57796	275 aa		13.58	□□□□□ -0.24
SRSF5-208	ENST00000554929	INTS5	Q6P9B9	1019 aa	Known RBP	13.58	□□□□□ -0.24
SRSF5-208	ENST00000554929	MICALL2	Q8IY33	904 aa		13.58	□□□□□ -0.24
SRSF5-208	ENST00000554929	KNSTRN	Q9Y448	316 aa		13.58	□□□□□ -0.24
SRSF5-208	ENST00000554929	LTBP1	Q14766	1721 aa		13.58	□□□□□ -0.24
SRSF5-208	ENST00000554929	NRXN2	Q9P2S2	1712 aa		13.57	□□□□□ -0.24
SRSF5-208	ENST00000554929	PPM1G	O15355	546 aa	Predicted RBP	13.57	□□□□□ -0.24
SRSF5-208	ENST00000554929	CNGB1	Q14028	1251 aa	Predicted RBP	13.57	□□□□□ -0.24
SRSF5-208	ENST00000554929	BICDL1	Q6ZP65	573 aa		13.57	□□□□□ -0.24
SRSF5-208	ENST00000554929	EYA1	Q99502	592 aa		13.57	□□□□□ -0.24
SRSF5-208	ENST00000554929	STK24	Q9Y6E0	443 aa		13.57	□□□□□ -0.24
SRSF5-208	ENST00000554929	ZNF541	Q9H0D2	1346 aa		13.57	□□□□□ -0.24
SRSF5-208	ENST00000554929	ADAMTSL1	Q8N6G6	1762 aa		13.56	□□□□□ -0.24
SRSF5-208	ENST00000554929	STK25	O00506	426 aa		13.56	□□□□□ -0.24
SRSF5-208	ENST00000554929	TMEM92	Q6UXU6	159 aa		13.56	□□□□□ -0.24
SRSF5-208	ENST00000554929	MFRP	Q9BY79	579 aa		13.56	□□□□□ -0.24
SRSF5-208	ENST00000554929	EMILIN1	Q9Y6C2	1016 aa		13.56	□□□□□ -0.24
SRSF5-208	ENST00000554929	PDE6B	P35913	854 aa		13.55	□□□□□ -0.24
SRSF5-208	ENST00000554929	CCDC24	Q8N4L8	307 aa		13.55	□□□□□ -0.24
SRSF5-208	ENST00000554929	GCC1	Q96CN9	775 aa		13.55	□□□□□ -0.24
SRSF5-208	ENST00000554929	NARF	Q9UHQ1	456 aa		13.55	□□□□□ -0.24
SRSF5-208	ENST00000554929	NCAPD2	Q15021	1401 aa		13.55	□□□□□ -0.24
SRSF5-208	ENST00000554929	ADAMTS7	Q9UKP4	1686 aa		13.54	□□□□□ -0.24
SRSF5-208	ENST00000554929		G3V3G9	751 aa		13.54	□□□□□ -0.24
SRSF5-208	ENST00000554929	HSP90AB1	P08238	724 aa	Known RBP	13.54	□□□□□ -0.24
SRSF5-208	ENST00000554929	CST9	Q5W186	159 aa		13.54	□□□□□ -0.24
SRSF5-208	ENST00000554929	PUS7	Q96PZ0	661 aa	Known RBP	13.54	□□□□□ -0.24
SRSF5-208	ENST00000554929	BCL2L12	Q9HB09	334 aa		13.54	□□□□□ -0.24
SRSF5-208	ENST00000554929	TLL2	Q9Y6L7	1015 aa		13.54	□□□□□ -0.24
SRSF5-208	ENST00000554929	KIF24	Q5T7B8	1368 aa		13.54	□□□□□ -0.24
SRSF5-208	ENST00000554929	HOXB3	P14651	431 aa	Predicted RBP	13.53	□□□□□ -0.24
SRSF5-208	ENST00000554929	CC2D1B	Q5T0F9	858 aa	Known RBP	13.53	□□□□□ -0.24
SRSF5-208	ENST00000554929	PDZRN3	Q9UPQ7	1066 aa		13.53	□□□□□ -0.24
SRSF5-208	ENST00000554929	SOS1	Q07889	1333 aa	Predicted RBP	13.53	□□□□□ -0.24
SRSF5-208	ENST00000554929	CACNA1S	Q13698	1873 aa		13.53	□□□□□ -0.24
SRSF5-208	ENST00000554929	TRAF5	O00463	557 aa		13.52	□□□□□ -0.25
SRSF5-208	ENST00000554929	BRPF1	P55201	1214 aa	Predicted RBP	13.52	□□□□□ -0.25
SRSF5-208	ENST00000554929	IRX6	P78412	446 aa	Predicted RBP	13.52	□□□□□ -0.25
SRSF5-208	ENST00000554929	HABP4	Q5JVS0	413 aa	Known RBP	13.52	□□□□□ -0.25
SRSF5-208	ENST00000554929	SOGA3	Q5TF21	947 aa		13.52	□□□□□ -0.25
SRSF5-208	ENST00000554929	CIAPIN1	Q6FI81	312 aa		13.52	□□□□□ -0.25
SRSF5-208	ENST00000554929	PRPF40B	Q6NWY9	871 aa	Known RBP	13.52	□□□□□ -0.25
SRSF5-208	ENST00000554929	DNAJC10	Q8IXB1	793 aa		13.52	□□□□□ -0.25
SRSF5-208	ENST00000554929	NBPF15	Q8N660	670 aa		13.52	□□□□□ -0.25
SRSF5-208	ENST00000554929	CNKSR1	Q969H4	720 aa		13.52	□□□□□ -0.25
SRSF5-208	ENST00000554929	BRIP1	Q9BX63	1249 aa		13.52	□□□□□ -0.25
SRSF5-208	ENST00000554929	SLX4	Q8IY92	1834 aa		13.52	□□□□□ -0.25
SRSF5-208	ENST00000554929	ANKRD31	Q8N7Z5	1873 aa		13.51	□□□□□ -0.25
SRSF5-208	ENST00000554929	TJP1	Q07157	1748 aa		13.51	□□□□□ -0.25
SRSF5-208	ENST00000554929	NFATC2IP	Q8NCF5	419 aa		13.51	□□□□□ -0.25
SRSF5-208	ENST00000554929	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.51	□□□□□ -0.25
SRSF5-208	ENST00000554929	PLSCR2	Q9NRY7	297 aa		13.51	□□□□□ -0.25
SRSF5-208	ENST00000554929	TRPM7	Q96QT4	1865 aa		13.5	□□□□□ -0.25
SRSF5-208	ENST00000554929	COL15A1	P39059	1388 aa		13.5	□□□□□ -0.25
SRSF5-208	ENST00000554929	NPHP1	O15259	732 aa		13.49	□□□□□ -0.25
SRSF5-208	ENST00000554929	MTHFS	P49914	203 aa		13.49	□□□□□ -0.25
SRSF5-208	ENST00000554929	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.49	□□□□□ -0.25
SRSF5-208	ENST00000554929	COL11A2	P13942	1736 aa	Predicted RBP	13.49	□□□□□ -0.25
SRSF5-208	ENST00000554929	LMOD1	P29536	600 aa	Predicted RBP	13.48	□□□□□ -0.25
SRSF5-208	ENST00000554929	PPP2R1A	P30153	589 aa		13.48	□□□□□ -0.25
SRSF5-208	ENST00000554929	CCDC93	Q567U6	631 aa		13.48	□□□□□ -0.25
SRSF5-208	ENST00000554929	TBC1D9B	Q66K14	1250 aa		13.48	□□□□□ -0.25
SRSF5-208	ENST00000554929	STYK1	Q6J9G0	422 aa		13.48	□□□□□ -0.25
SRSF5-208	ENST00000554929	PRR5L	Q6MZQ0	368 aa		13.48	□□□□□ -0.25
SRSF5-208	ENST00000554929	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.48	□□□□□ -0.25
SRSF5-208	ENST00000554929	SAPCD2	Q86UD0	394 aa		13.48	□□□□□ -0.25
SRSF5-208	ENST00000554929	CDAN1	Q8IWY9	1227 aa		13.48	□□□□□ -0.25
SRSF5-208	ENST00000554929	MARVELD3	Q96A59	401 aa		13.48	□□□□□ -0.25
SRSF5-208	ENST00000554929	GJA3	Q9Y6H8	435 aa		13.48	□□□□□ -0.25
SRSF5-208	ENST00000554929	CELF2	O95319	508 aa	Known RBP	13.47	□□□□□ -0.25
SRSF5-208	ENST00000554929	CYP19A1	P11511	503 aa	Predicted RBP	13.47	□□□□□ -0.25
SRSF5-208	ENST00000554929	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.47	□□□□□ -0.25
SRSF5-208	ENST00000554929	WDR43	Q15061	677 aa	Known RBP eCLIP	13.47	□□□□□ -0.25	1e-10	■□□□□ 10.3
SRSF5-208	ENST00000554929	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.47	□□□□□ -0.25
SRSF5-208	ENST00000554929	GPC2	Q8N158	579 aa		13.47	□□□□□ -0.25
SRSF5-208	ENST00000554929	NGEF	Q8N5V2	710 aa		13.47	□□□□□ -0.25
SRSF5-208	ENST00000554929	ZBTB1	Q9Y2K1	713 aa		13.47	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms