RNA–Protein interactions for RNA: ENST00000554891.5

HNRNPC-213, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-213ENST00000554891 LAMB2P55268 1798 aa13.84□□□□□ -0.19
HNRNPC-213ENST00000554891 ELL2O00472 640 aaPredicted RBP13.84□□□□□ -0.19
HNRNPC-213ENST00000554891 ALDH1B1P30837 517 aa13.84□□□□□ -0.19
HNRNPC-213ENST00000554891 CCDC93Q567U6 631 aa13.84□□□□□ -0.19
HNRNPC-213ENST00000554891 HDGFL1Q5TGJ6 251 aa13.84□□□□□ -0.19
HNRNPC-213ENST00000554891 DUSP27Q5VZP5 1158 aa13.84□□□□□ -0.19
HNRNPC-213ENST00000554891 C16orf71Q8IYS4 520 aaPredicted RBP13.84□□□□□ -0.19
HNRNPC-213ENST00000554891 WDR90Q96KV7 1748 aa13.84□□□□□ -0.19
HNRNPC-213ENST00000554891 SNED1Q8TER0 1413 aa13.83□□□□□ -0.2
HNRNPC-213ENST00000554891 TCERG1O14776 1098 aaKnown RBP13.83□□□□□ -0.2
HNRNPC-213ENST00000554891 VEGFAP15692 232 aaPredicted RBP13.83□□□□□ -0.2
HNRNPC-213ENST00000554891 FKBP4Q02790 459 aaKnown RBP eCLIP13.83□□□□□ -0.2
HNRNPC-213ENST00000554891 IBTKQ9P2D0 1353 aaPredicted RBP13.83□□□□□ -0.2
HNRNPC-213ENST00000554891 HCLS1P14317 486 aaPredicted RBP13.82□□□□□ -0.2
HNRNPC-213ENST00000554891 HOXA10P31260 410 aaPredicted RBP13.82□□□□□ -0.2
HNRNPC-213ENST00000554891 TCIRG1Q13488 830 aa13.82□□□□□ -0.2
HNRNPC-213ENST00000554891 SOGA3Q5TF21 947 aa13.82□□□□□ -0.2
HNRNPC-213ENST00000554891 DPY19L2Q6NUT2 758 aa13.82□□□□□ -0.2
HNRNPC-213ENST00000554891 PPP1R42Q7Z4L9 355 aa13.82□□□□□ -0.2
HNRNPC-213ENST00000554891 NLRP10Q86W26 655 aa13.82□□□□□ -0.2
HNRNPC-213ENST00000554891 DNAJC5GQ8N7S2 189 aa13.82□□□□□ -0.2
HNRNPC-213ENST00000554891 UTP14AQ9BVJ6 771 aaKnown RBP13.82□□□□□ -0.2
HNRNPC-213ENST00000554891 ZNF316A6NFI3 1004 aaPredicted RBP13.81□□□□□ -0.2
HNRNPC-213ENST00000554891 POTEIP0CG38 1075 aa13.81□□□□□ -0.2
HNRNPC-213ENST00000554891 POTEJP0CG39 1038 aa13.81□□□□□ -0.2
HNRNPC-213ENST00000554891 ZEB1P37275 1124 aaPredicted RBP13.81□□□□□ -0.2
HNRNPC-213ENST00000554891 PARP10Q53GL7 1025 aa13.81□□□□□ -0.2
HNRNPC-213ENST00000554891 SLC10A5Q5PT55 438 aa13.81□□□□□ -0.2
HNRNPC-213ENST00000554891 C8orf58Q8NAV2 365 aa13.81□□□□□ -0.2
HNRNPC-213ENST00000554891 RPGRQ92834 1020 aaKnown RBP13.81□□□□□ -0.2
HNRNPC-213ENST00000554891 COL4A5P29400 1685 aa13.81□□□□□ -0.2
HNRNPC-213ENST00000554891 RIC1Q4ADV7 1423 aa13.81□□□□□ -0.2
HNRNPC-213ENST00000554891 APLP1P51693 650 aa13.8□□□□□ -0.2
HNRNPC-213ENST00000554891 FSTL1Q12841 308 aa13.8□□□□□ -0.2
HNRNPC-213ENST00000554891 RTKN2Q8IZC4 609 aa13.8□□□□□ -0.2
HNRNPC-213ENST00000554891 CRAMP1Q96RY5 1269 aa13.8□□□□□ -0.2
HNRNPC-213ENST00000554891 PHAXQ9H814 394 aaKnown RBP13.8□□□□□ -0.2
HNRNPC-213ENST00000554891 IFT57Q9NWB7 429 aa13.8□□□□□ -0.2
HNRNPC-213ENST00000554891 DBF4Q9UBU7 674 aaPredicted RBP13.8□□□□□ -0.2
HNRNPC-213ENST00000554891 ZNF541Q9H0D2 1346 aa13.8□□□□□ -0.2
HNRNPC-213ENST00000554891 ATP5J2-PTCD1G3V325 749 aa13.79□□□□□ -0.2
HNRNPC-213ENST00000554891 HOXB7P09629 217 aa13.79□□□□□ -0.2
HNRNPC-213ENST00000554891 IARSP41252 1262 aaKnown RBP13.79□□□□□ -0.2
HNRNPC-213ENST00000554891 GNAI1P63096 354 aa13.79□□□□□ -0.2
HNRNPC-213ENST00000554891 ANKRD13DQ6ZTN6 518 aa13.79□□□□□ -0.2
HNRNPC-213ENST00000554891 TSPYL6Q8N831 410 aa13.79□□□□□ -0.2
HNRNPC-213ENST00000554891 PLBD2Q8NHP8 589 aa13.79□□□□□ -0.2
HNRNPC-213ENST00000554891 RBM17Q96I25 401 aaKnown RBP13.79□□□□□ -0.2
HNRNPC-213ENST00000554891 NLRP3Q96P20 1036 aa13.79□□□□□ -0.2
HNRNPC-213ENST00000554891 TRMT112Q9UI30 125 aaKnown RBP13.79□□□□□ -0.2
HNRNPC-213ENST00000554891 DDX60Q8IY21 1712 aaKnown RBP13.78□□□□□ -0.2
HNRNPC-213ENST00000554891 SMC1BQ8NDV3 1235 aa13.78□□□□□ -0.2
HNRNPC-213ENST00000554891 ISCA1Q9BUE6 129 aa13.78□□□□□ -0.2
HNRNPC-213ENST00000554891 ABCC4O15439 1325 aa13.78□□□□□ -0.2
HNRNPC-213ENST00000554891 COL4A1P02462 1669 aa13.78□□□□□ -0.2
HNRNPC-213ENST00000554891 PPEF1O14829 653 aaPredicted RBP13.77□□□□□ -0.21
HNRNPC-213ENST00000554891 HSP90AB3PQ58FF7 597 aa13.77□□□□□ -0.21
HNRNPC-213ENST00000554891 RTL5Q5HYW3 569 aaPredicted RBP13.77□□□□□ -0.21
HNRNPC-213ENST00000554891 TSR2Q969E8 191 aaKnown RBP13.77□□□□□ -0.21
HNRNPC-213ENST00000554891 FAM89AQ96GI7 184 aa13.77□□□□□ -0.21
HNRNPC-213ENST00000554891 PSMD1Q99460 953 aa13.77□□□□□ -0.21
HNRNPC-213ENST00000554891 FZD9O00144 591 aa13.76□□□□□ -0.21
HNRNPC-213ENST00000554891 MRS2Q9HD23 443 aa13.76□□□□□ -0.21
HNRNPC-213ENST00000554891 HYPKQ9NX55 129 aa13.76□□□□□ -0.21
HNRNPC-213ENST00000554891 SCN4AP35499 1836 aa13.76□□□□□ -0.21
HNRNPC-213ENST00000554891 SH3TC1Q8TE82 1336 aa13.75□□□□□ -0.21
HNRNPC-213ENST00000554891 WWC1Q8IX03 1113 aa13.75□□□□□ -0.21
HNRNPC-213ENST00000554891 SALL2Q9Y467 1007 aaPredicted RBP13.75□□□□□ -0.21
HNRNPC-213ENST00000554891 CC2D2BQ6DHV5 1058 aa13.74□□□□□ -0.21
HNRNPC-213ENST00000554891 JARID2Q92833 1246 aaPredicted RBP13.74□□□□□ -0.21
HNRNPC-213ENST00000554891 L3MBTL3Q96JM7 780 aaPredicted RBP13.74□□□□□ -0.21
HNRNPC-213ENST00000554891 TAF1DQ9H5J8 278 aaPredicted RBP13.74□□□□□ -0.21
HNRNPC-213ENST00000554891 ATP6V0A2Q9Y487 856 aa13.74□□□□□ -0.21
HNRNPC-213ENST00000554891 LTBP1Q14766 1721 aa13.73□□□□□ -0.21
HNRNPC-213ENST00000554891 RNF123Q5XPI4 1314 aa13.73□□□□□ -0.21
HNRNPC-213ENST00000554891 ANP32CO43423 234 aa13.73□□□□□ -0.21
HNRNPC-213ENST00000554891 CALD1Q05682 793 aaKnown RBP13.73□□□□□ -0.21
HNRNPC-213ENST00000554891 AOC3Q16853 763 aa13.73□□□□□ -0.21
HNRNPC-213ENST00000554891 RIC3Q7Z5B4 369 aa13.73□□□□□ -0.21
HNRNPC-213ENST00000554891 MYD88Q99836 296 aa13.73□□□□□ -0.21
HNRNPC-213ENST00000554891 CCDC27Q2M243 656 aa13.72□□□□□ -0.21
HNRNPC-213ENST00000554891 CHADLQ6NUI6 762 aa13.72□□□□□ -0.21
HNRNPC-213ENST00000554891 DDX46Q7L014 1031 aaKnown RBP13.72□□□□□ -0.21
HNRNPC-213ENST00000554891 G2E3Q7L622 706 aa13.72□□□□□ -0.21
HNRNPC-213ENST00000554891 SP8Q8IXZ3 490 aa13.72□□□□□ -0.21
HNRNPC-213ENST00000554891 LARGE2Q8N3Y3 721 aa13.72□□□□□ -0.21
HNRNPC-213ENST00000554891 JDP2Q8WYK2 163 aa13.72□□□□□ -0.21
HNRNPC-213ENST00000554891 CELF1Q92879 486 aaKnown RBP13.72□□□□□ -0.21
HNRNPC-213ENST00000554891 KLRG1Q96E93 195 aa13.72□□□□□ -0.21
HNRNPC-213ENST00000554891 GJA3Q9Y6H8 435 aa13.72□□□□□ -0.21
HNRNPC-213ENST00000554891 PPIP5K2O43314 1243 aa13.71□□□□□ -0.21
HNRNPC-213ENST00000554891 BBOX1O75936 387 aa13.71□□□□□ -0.21
HNRNPC-213ENST00000554891 TRIM28Q13263 835 aaKnown RBP13.71□□□□□ -0.21
HNRNPC-213ENST00000554891 GRAPQ13588 217 aa13.71□□□□□ -0.21
HNRNPC-213ENST00000554891 EAPPQ56P03 285 aaPredicted RBP13.71□□□□□ -0.21
HNRNPC-213ENST00000554891 GRAPLQ8TC17 118 aaPredicted RBP13.71□□□□□ -0.21
HNRNPC-213ENST00000554891 IRS4O14654 1257 aaPredicted RBP13.7□□□□□ -0.22
HNRNPC-213ENST00000554891 EPHX2P34913 555 aa13.7□□□□□ -0.22
HNRNPC-213ENST00000554891 GOLGA2Q08379 1002 aa13.7□□□□□ -0.22
HNRNPC-213ENST00000554891 SF3B3Q15393 1217 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms