RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 MYL6BP14649 208 aa31.99■■■□□ 2.71
FOXA1-204ENST00000554607 EIF6P56537 245 aaKnown RBP31.99■■■□□ 2.71
FOXA1-204ENST00000554607 CNTROBQ8N137 903 aa31.99■■■□□ 2.71
FOXA1-204ENST00000554607 PLEKHF1Q96S99 279 aa31.99■■■□□ 2.71
FOXA1-204ENST00000554607 RIC1Q4ADV7 1423 aa31.99■■■□□ 2.71
FOXA1-204ENST00000554607 VEGFBP49765 207 aa31.98■■■□□ 2.71
FOXA1-204ENST00000554607 AIDAQ96BJ3 306 aa31.98■■■□□ 2.71
FOXA1-204ENST00000554607 SNED1Q8TER0 1413 aa31.98■■■□□ 2.71
FOXA1-204ENST00000554607 DLG5Q8TDM6 1919 aa31.98■■■□□ 2.71
FOXA1-204ENST00000554607 FOXN1O15353 648 aa31.97■■■□□ 2.71
FOXA1-204ENST00000554607 GPTP24298 496 aa31.97■■■□□ 2.71
FOXA1-204ENST00000554607 RBM17Q96I25 401 aaKnown RBP31.97■■■□□ 2.71
FOXA1-204ENST00000554607 ZBTB3Q9H5J0 574 aa31.97■■■□□ 2.71
FOXA1-204ENST00000554607 ERBB4Q15303 1308 aa31.97■■■□□ 2.71
FOXA1-204ENST00000554607 SUSD4Q5VX71 490 aa31.96■■■□□ 2.71
FOXA1-204ENST00000554607 CRAMP1Q96RY5 1269 aa31.96■■■□□ 2.71
FOXA1-204ENST00000554607 PRDM10Q9NQV6 1147 aa31.96■■■□□ 2.71
FOXA1-204ENST00000554607 ADAMTSL1Q8N6G6 1762 aa31.96■■■□□ 2.71
FOXA1-204ENST00000554607 MAP1SQ66K74 1059 aaPredicted RBP31.95■■■□□ 2.71
FOXA1-204ENST00000554607 ZNF34Q8IZ26 560 aa31.95■■■□□ 2.71
FOXA1-204ENST00000554607 UBN2Q6ZU65 1347 aa31.95■■■□□ 2.7
FOXA1-204ENST00000554607 MAPK8IP3Q9UPT6 1336 aa31.95■■■□□ 2.7
FOXA1-204ENST00000554607 LMOD1P29536 600 aaPredicted RBP31.94■■■□□ 2.7
FOXA1-204ENST00000554607 CTCFP49711 727 aaPredicted RBP31.94■■■□□ 2.7
FOXA1-204ENST00000554607 GIGYF2Q6Y7W6 1299 aaKnown RBP31.94■■■□□ 2.7
FOXA1-204ENST00000554607 PPP1R42Q7Z4L9 355 aa31.94■■■□□ 2.7
FOXA1-204ENST00000554607 THUMPD2Q9BTF0 503 aaKnown RBP31.94■■■□□ 2.7
FOXA1-204ENST00000554607 GJA3Q9Y6H8 435 aa31.94■■■□□ 2.7
FOXA1-204ENST00000554607 DEFB115Q30KQ5 88 aa31.93■■■□□ 2.7
FOXA1-204ENST00000554607 LARGE2Q8N3Y3 721 aa31.93■■■□□ 2.7
FOXA1-204ENST00000554607 PARP10Q53GL7 1025 aa31.92■■■□□ 2.7
FOXA1-204ENST00000554607 TMX4Q9H1E5 349 aaPredicted RBP31.92■■■□□ 2.7
FOXA1-204ENST00000554607 RASSF10A6NK89 507 aa31.91■■■□□ 2.7
FOXA1-204ENST00000554607 PPEF1O14829 653 aaPredicted RBP31.91■■■□□ 2.7
FOXA1-204ENST00000554607 NTSR2O95665 410 aa31.9■■■□□ 2.7
FOXA1-204ENST00000554607 NLRP3Q96P20 1036 aa31.9■■■□□ 2.7
FOXA1-204ENST00000554607 WBP1LQ9NX94 342 aa31.89■■■□□ 2.7
FOXA1-204ENST00000554607 TSPYL4Q9UJ04 414 aa31.88■■■□□ 2.69
FOXA1-204ENST00000554607 NIM1KQ8IY84 436 aa31.87■■■□□ 2.69
FOXA1-204ENST00000554607 VPS33BQ9H267 617 aa31.87■■■□□ 2.69
FOXA1-204ENST00000554607 ABT1Q9ULW3 272 aaKnown RBP31.87■■■□□ 2.69
FOXA1-204ENST00000554607 TCERG1O14776 1098 aaKnown RBP31.86■■■□□ 2.69
FOXA1-204ENST00000554607 DDX21Q9NR30 783 aaKnown RBP eCLIP31.86■■■□□ 2.69
FOXA1-204ENST00000554607 SCNN1DP51172 638 aa31.85■■■□□ 2.69
FOXA1-204ENST00000554607 SLC10A5Q5PT55 438 aa31.85■■■□□ 2.69
FOXA1-204ENST00000554607 USP50Q70EL3 339 aaPredicted RBP31.85■■■□□ 2.69
FOXA1-204ENST00000554607 UTP14AQ9BVJ6 771 aaKnown RBP31.85■■■□□ 2.69
FOXA1-204ENST00000554607 BABAM1Q9NWV8 329 aa31.85■■■□□ 2.69
FOXA1-204ENST00000554607 COL4A5P29400 1685 aa31.85■■■□□ 2.69
FOXA1-204ENST00000554607 EPS15P42566 896 aa31.84■■■□□ 2.69
FOXA1-204ENST00000554607 WDR33Q9C0J8 1336 aaKnown RBP31.83■■■□□ 2.69
FOXA1-204ENST00000554607 PPIP5K2O43314 1243 aa31.83■■■□□ 2.69
FOXA1-204ENST00000554607 EIF2S2P20042 333 aaKnown RBP31.83■■■□□ 2.69
FOXA1-204ENST00000554607 MAP2K1Q02750 393 aaPredicted RBP31.83■■■□□ 2.69
FOXA1-204ENST00000554607 C3orf67Q6ZVT6 689 aa31.83■■■□□ 2.69
FOXA1-204ENST00000554607 ATP6V0A2Q9Y487 856 aa31.83■■■□□ 2.69
FOXA1-204ENST00000554607 SUPT20HQ8NEM7 779 aa31.82■■■□□ 2.68
FOXA1-204ENST00000554607 PDIA6Q15084 440 aa31.81■■■□□ 2.68
FOXA1-204ENST00000554607 LRP10Q7Z4F1 713 aa31.81■■■□□ 2.68
FOXA1-204ENST00000554607 LBX1P52954 281 aa31.8■■■□□ 2.68
FOXA1-204ENST00000554607 RIPK4P57078 832 aa31.8■■■□□ 2.68
FOXA1-204ENST00000554607 HSP90AB3PQ58FF7 597 aa31.8■■■□□ 2.68
FOXA1-204ENST00000554607 LTBP1Q14766 1721 aa31.79■■■□□ 2.68
FOXA1-204ENST00000554607 BBOX1O75936 387 aa31.78■■■□□ 2.68
FOXA1-204ENST00000554607 LMOD3Q0VAK6 560 aa31.78■■■□□ 2.68
FOXA1-204ENST00000554607 AOC3Q16853 763 aa31.78■■■□□ 2.68
FOXA1-204ENST00000554607 ECE1P42892 770 aa31.77■■■□□ 2.68
FOXA1-204ENST00000554607 RTFDC1Q9BY42 306 aaPredicted RBP31.77■■■□□ 2.68
FOXA1-204ENST00000554607 ADARB2Q9NS39 739 aaKnown RBP31.77■■■□□ 2.68
FOXA1-204ENST00000554607 ZNRF3Q9ULT6 936 aa31.77■■■□□ 2.68
FOXA1-204ENST00000554607 ABCC4O15439 1325 aa31.76■■■□□ 2.68
FOXA1-204ENST00000554607 SLC51AQ86UW1 340 aa31.76■■■□□ 2.67
FOXA1-204ENST00000554607 GPRC5DQ9NZD1 345 aa31.76■■■□□ 2.67
FOXA1-204ENST00000554607 PROSER3Q2NL68 480 aa31.75■■■□□ 2.67
FOXA1-204ENST00000554607 SP8Q8IXZ3 490 aa31.75■■■□□ 2.67
FOXA1-204ENST00000554607 HSPA8P11142 646 aaKnown RBP31.74■■■□□ 2.67
FOXA1-204ENST00000554607 DPP8Q6V1X1 898 aaPredicted RBP31.74■■■□□ 2.67
FOXA1-204ENST00000554607 COPS6Q7L5N1 327 aa31.74■■■□□ 2.67
FOXA1-204ENST00000554607 ANXA1P04083 346 aa31.73■■■□□ 2.67
FOXA1-204ENST00000554607 CXCL9Q07325 125 aa31.73■■■□□ 2.67
FOXA1-204ENST00000554607 PAXIP1Q6ZW49 1069 aaPredicted RBP31.73■■■□□ 2.67
FOXA1-204ENST00000554607 MPNDQ8N594 471 aa31.73■■■□□ 2.67
FOXA1-204ENST00000554607 CAPNS2Q96L46 248 aa31.73■■■□□ 2.67
FOXA1-204ENST00000554607 TMPOP42166 694 aaKnown RBP31.72■■■□□ 2.67
FOXA1-204ENST00000554607 DDX46Q7L014 1031 aaKnown RBP31.72■■■□□ 2.67
FOXA1-204ENST00000554607 NLRP10Q86W26 655 aa31.72■■■□□ 2.67
FOXA1-204ENST00000554607 BEGAINQ9BUH8 593 aa31.72■■■□□ 2.67
FOXA1-204ENST00000554607 FMR1Q06787 632 aaKnown RBP eCLIP31.71■■■□□ 2.67
FOXA1-204ENST00000554607 AIMP1Q12904 312 aaKnown RBP31.71■■■□□ 2.67
FOXA1-204ENST00000554607 TCIRG1Q13488 830 aa31.71■■■□□ 2.67
FOXA1-204ENST00000554607 CST9Q5W186 159 aa31.71■■■□□ 2.67
FOXA1-204ENST00000554607 RALBP1Q15311 655 aa31.7■■■□□ 2.67
FOXA1-204ENST00000554607 XAGE3Q8WTP9 111 aa31.7■■■□□ 2.67
FOXA1-204ENST00000554607 TRMT112Q9UI30 125 aaKnown RBP31.7■■■□□ 2.67
FOXA1-204ENST00000554607 TLL2Q9Y6L7 1015 aa31.7■■■□□ 2.67
FOXA1-204ENST00000554607 TRPM7Q96QT4 1865 aa31.69■■■□□ 2.66
FOXA1-204ENST00000554607 TRAF5O00463 557 aa31.69■■■□□ 2.66
FOXA1-204ENST00000554607 HCLS1P14317 486 aaPredicted RBP31.69■■■□□ 2.66
FOXA1-204ENST00000554607 KIAA2012Q0VF49 1180 aa31.69■■■□□ 2.66
FOXA1-204ENST00000554607 TNIP1Q15025 636 aa31.69■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms