RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 ALBP02768 609 aa7.29□□□□□ -1.24
ATXN3-227ENST00000554491 FLIIQ13045 1269 aa7.29□□□□□ -1.24
ATXN3-227ENST00000554491 Q8N3U1 123 aa7.29□□□□□ -1.24
ATXN3-227ENST00000554491 TNFRSF25Q93038 417 aa7.29□□□□□ -1.24
ATXN3-227ENST00000554491 SUSD3Q96L08 255 aa7.29□□□□□ -1.24
ATXN3-227ENST00000554491 M0R2N6 131 aa7.28□□□□□ -1.24
ATXN3-227ENST00000554491 PPP1R12BO60237 982 aaPredicted RBP7.28□□□□□ -1.24
ATXN3-227ENST00000554491 ADH7P40394 386 aa7.28□□□□□ -1.24
ATXN3-227ENST00000554491 GATA4P43694 442 aa7.28□□□□□ -1.24
ATXN3-227ENST00000554491 TYRO3Q06418 890 aa7.28□□□□□ -1.24
ATXN3-227ENST00000554491 SIX5Q8N196 739 aa7.28□□□□□ -1.24
ATXN3-227ENST00000554491 MICALL1Q8N3F8 863 aa7.28□□□□□ -1.24
ATXN3-227ENST00000554491 KCNQ4P56696 695 aa7.27□□□□□ -1.25
ATXN3-227ENST00000554491 SEMA6BQ9H3T3 888 aa7.27□□□□□ -1.25
ATXN3-227ENST00000554491 ANKIB1Q9P2G1 1089 aa7.27□□□□□ -1.25
ATXN3-227ENST00000554491 KCNH4Q9UQ05 1017 aa7.27□□□□□ -1.25
ATXN3-227ENST00000554491 CHMP3Q9Y3E7 222 aa7.27□□□□□ -1.25
ATXN3-227ENST00000554491 PRRT3Q5FWE3 981 aa7.26□□□□□ -1.25
ATXN3-227ENST00000554491 ALDH16A1Q8IZ83 802 aa7.26□□□□□ -1.25
ATXN3-227ENST00000554491 CLUAP1Q96AJ1 413 aa7.26□□□□□ -1.25
ATXN3-227ENST00000554491 TFIP11Q9UBB9 837 aaKnown RBP7.26□□□□□ -1.25
ATXN3-227ENST00000554491 CEP164Q9UPV0 1460 aa7.25□□□□□ -1.25
ATXN3-227ENST00000554491 ATAD2Q6PL18 1390 aa7.25□□□□□ -1.25
ATXN3-227ENST00000554491 LGR5O75473 907 aa7.25□□□□□ -1.25
ATXN3-227ENST00000554491 NID1P14543 1247 aa7.25□□□□□ -1.25
ATXN3-227ENST00000554491 RASA1P20936 1047 aa7.25□□□□□ -1.25
ATXN3-227ENST00000554491 NEUROD1Q13562 356 aa7.25□□□□□ -1.25
ATXN3-227ENST00000554491 C20orf204Q6ZNR8 217 aa7.25□□□□□ -1.25
ATXN3-227ENST00000554491 GAS2L2Q8NHY3 880 aa7.25□□□□□ -1.25
ATXN3-227ENST00000554491 CHMP7Q8WUX9 453 aaPredicted RBP7.25□□□□□ -1.25
ATXN3-227ENST00000554491 SCG3Q8WXD2 468 aaKnown RBP7.25□□□□□ -1.25
ATXN3-227ENST00000554491 GLMNQ92990 594 aa7.25□□□□□ -1.25
ATXN3-227ENST00000554491 BHMTQ93088 406 aa7.25□□□□□ -1.25
ATXN3-227ENST00000554491 NGLY1Q96IV0 654 aa7.25□□□□□ -1.25
ATXN3-227ENST00000554491 C2orf49Q9BVC5 232 aaPredicted RBP7.25□□□□□ -1.25
ATXN3-227ENST00000554491 PRDM6Q9NQX0 595 aa7.25□□□□□ -1.25
ATXN3-227ENST00000554491 ARAP1Q96P48 1450 aa7.24□□□□□ -1.25
ATXN3-227ENST00000554491 SPDYE3A6NKU9 549 aa7.24□□□□□ -1.25
ATXN3-227ENST00000554491 BTLAQ7Z6A9 289 aa7.24□□□□□ -1.25
ATXN3-227ENST00000554491 FNBP4Q8N3X1 1017 aaPredicted RBP7.24□□□□□ -1.25
ATXN3-227ENST00000554491 RBM19Q9Y4C8 960 aaKnown RBP7.24□□□□□ -1.25
ATXN3-227ENST00000554491 MAFBQ9Y5Q3 323 aaPredicted RBP7.24□□□□□ -1.25
ATXN3-227ENST00000554491 TBC1D8BQ0IIM8 1120 aa7.23□□□□□ -1.25
ATXN3-227ENST00000554491 GRIK4Q16099 956 aa7.23□□□□□ -1.25
ATXN3-227ENST00000554491 RSPO4Q2I0M5 234 aaPredicted RBP7.23□□□□□ -1.25
ATXN3-227ENST00000554491 IGFLR1Q9H665 355 aa7.23□□□□□ -1.25
ATXN3-227ENST00000554491 TPSG1Q9NRR2 321 aa7.23□□□□□ -1.25
ATXN3-227ENST00000554491 APBA3O96018 575 aa7.22□□□□□ -1.25
ATXN3-227ENST00000554491 SEC13P55735 322 aa7.22□□□□□ -1.25
ATXN3-227ENST00000554491 TRIM28Q13263 835 aaKnown RBP7.22□□□□□ -1.25
ATXN3-227ENST00000554491 STAG2Q8N3U4 1231 aa7.22□□□□□ -1.25
ATXN3-227ENST00000554491 CADPSQ9ULU8 1353 aa7.21□□□□□ -1.25
ATXN3-227ENST00000554491 CHD1O14646 1710 aa7.21□□□□□ -1.25
ATXN3-227ENST00000554491 CRTC2Q53ET0 693 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-227ENST00000554491 NKAPLQ5M9Q1 402 aa7.21□□□□□ -1.26
ATXN3-227ENST00000554491 PROSER2Q86WR7 435 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-227ENST00000554491 UBE2OQ9C0C9 1292 aaKnown RBP7.21□□□□□ -1.26
ATXN3-227ENST00000554491 SLC6A14Q9UN76 642 aa7.21□□□□□ -1.26
ATXN3-227ENST00000554491 BCS1LQ9Y276 419 aa7.21□□□□□ -1.26
ATXN3-227ENST00000554491 LILRB5O75023 590 aa7.2□□□□□ -1.26
ATXN3-227ENST00000554491 TRAPPC3LQ5T215 181 aa7.2□□□□□ -1.26
ATXN3-227ENST00000554491 NUDT8Q8WV74 236 aa7.2□□□□□ -1.26
ATXN3-227ENST00000554491 HINFPQ9BQA5 517 aa7.2□□□□□ -1.26
ATXN3-227ENST00000554491 GSX2Q9BZM3 304 aa7.2□□□□□ -1.26
ATXN3-227ENST00000554491 NAGPAQ9UK23 515 aa7.2□□□□□ -1.26
ATXN3-227ENST00000554491 GRNP28799 593 aaKnown RBP7.19□□□□□ -1.26
ATXN3-227ENST00000554491 DPYDQ12882 1025 aa7.19□□□□□ -1.26
ATXN3-227ENST00000554491 PTK7Q13308 1070 aa7.19□□□□□ -1.26
ATXN3-227ENST00000554491 FOXD4L6Q3SYB3 417 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-227ENST00000554491 ZMYM1Q5SVZ6 1142 aa7.19□□□□□ -1.26
ATXN3-227ENST00000554491 KANK4Q5T7N3 995 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-227ENST00000554491 FOXD4L3Q6VB84 417 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-227ENST00000554491 DMGDHQ9UI17 866 aaKnown RBP7.19□□□□□ -1.26
ATXN3-227ENST00000554491 RTN1Q16799 776 aa7.18□□□□□ -1.26
ATXN3-227ENST00000554491 LARP1Q6PKG0 1096 aaKnown RBP7.18□□□□□ -1.26
ATXN3-227ENST00000554491 JPH1Q9HDC5 661 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-227ENST00000554491 DNAJB12Q9NXW2 375 aaKnown RBP7.18□□□□□ -1.26
ATXN3-227ENST00000554491 FANCD2Q9BXW9 1451 aa7.17□□□□□ -1.26
ATXN3-227ENST00000554491 A0A0A0MRY4 1105 aa7.17□□□□□ -1.26
ATXN3-227ENST00000554491 TGFBR3LH3BV60 316 aa7.17□□□□□ -1.26
ATXN3-227ENST00000554491 DYRK3O43781 588 aa7.17□□□□□ -1.26
ATXN3-227ENST00000554491 SELPP16109 830 aa7.17□□□□□ -1.26
ATXN3-227ENST00000554491 NFKB1P19838 968 aa7.17□□□□□ -1.26
ATXN3-227ENST00000554491 IER5Q5VY09 327 aa7.17□□□□□ -1.26
ATXN3-227ENST00000554491 CYB5RLQ6IPT4 315 aa7.17□□□□□ -1.26
ATXN3-227ENST00000554491 PSAPL1Q6NUJ1 521 aa7.17□□□□□ -1.26
ATXN3-227ENST00000554491 SHISA2Q6UWI4 295 aa7.17□□□□□ -1.26
ATXN3-227ENST00000554491 NACC1Q96RE7 527 aa7.17□□□□□ -1.26
ATXN3-227ENST00000554491 PPP1R12CQ9BZL4 782 aa7.17□□□□□ -1.26
ATXN3-227ENST00000554491 KLK14Q9P0G3 267 aa7.17□□□□□ -1.26
ATXN3-227ENST00000554491 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-227ENST00000554491 URB2Q14146 1524 aaKnown RBP7.17□□□□□ -1.26
ATXN3-227ENST00000554491 AFF1P51825 1210 aaKnown RBP7.16□□□□□ -1.26
ATXN3-227ENST00000554491 CCINQ13939 588 aa7.16□□□□□ -1.26
ATXN3-227ENST00000554491 HIF1AQ16665 826 aa7.16□□□□□ -1.26
ATXN3-227ENST00000554491 PNMA5Q96PV4 448 aa7.16□□□□□ -1.26
ATXN3-227ENST00000554491 EIF4G3O43432 1585 aaKnown RBP7.16□□□□□ -1.26
ATXN3-227ENST00000554491 USP17L15C9J2P7 530 aa7.15□□□□□ -1.26
ATXN3-227ENST00000554491 USP17L10C9JJH3 530 aa7.15□□□□□ -1.26
ATXN3-227ENST00000554491 USP17L13C9JLJ4 530 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms