RNA–Protein interactions for RNA: ENST00000554329.6

TMEM253-203, Transcript of transmembrane protein 253, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM253, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-203ENST00000554329 COL4A1P02462 1669 aa14.99□□□□□ -0.01
TMEM253-203ENST00000554329 FER1L6Q2WGJ9 1857 aa14.99□□□□□ -0.01
TMEM253-203ENST00000554329 DDX60Q8IY21 1712 aaKnown RBP14.98□□□□□ -0.01
TMEM253-203ENST00000554329 HOXB7P09629 217 aa14.98□□□□□ -0.01
TMEM253-203ENST00000554329 EXOSC9Q06265 439 aaKnown RBP14.98□□□□□ -0.01
TMEM253-203ENST00000554329 TCIRG1Q13488 830 aa14.98□□□□□ -0.01
TMEM253-203ENST00000554329 TWISTNBQ3B726 338 aaPredicted RBP14.98□□□□□ -0.01
TMEM253-203ENST00000554329 STYK1Q6J9G0 422 aa14.98□□□□□ -0.01
TMEM253-203ENST00000554329 MYD88Q99836 296 aa14.98□□□□□ -0.01
TMEM253-203ENST00000554329 UTP14AQ9BVJ6 771 aaKnown RBP14.98□□□□□ -0.01
TMEM253-203ENST00000554329 NYXQ9GZU5 481 aa14.98□□□□□ -0.01
TMEM253-203ENST00000554329 GPBP1L1Q9HC44 474 aaPredicted RBP14.98□□□□□ -0.01
TMEM253-203ENST00000554329 NPR1P16066 1061 aa14.97□□□□□ -0.01
TMEM253-203ENST00000554329 ANKRD13DQ6ZTN6 518 aa14.97□□□□□ -0.01
TMEM253-203ENST00000554329 RIC3Q7Z5B4 369 aa14.97□□□□□ -0.01
TMEM253-203ENST00000554329 NMRK2Q9NPI5 230 aa14.97□□□□□ -0.01
TMEM253-203ENST00000554329 TRMT112Q9UI30 125 aaKnown RBP14.97□□□□□ -0.01
TMEM253-203ENST00000554329 PPP1R42Q7Z4L9 355 aa14.96□□□□□ -0.01
TMEM253-203ENST00000554329 PLBD2Q8NHP8 589 aa14.96□□□□□ -0.01
TMEM253-203ENST00000554329 CNKSR1Q969H4 720 aa14.96□□□□□ -0.01
TMEM253-203ENST00000554329 FAM89AQ96GI7 184 aa14.96□□□□□ -0.01
TMEM253-203ENST00000554329 HYPKQ9NX55 129 aa14.96□□□□□ -0.01
TMEM253-203ENST00000554329 KLRG2A4D1S0 409 aaPredicted RBP14.95□□□□□ -0.02
TMEM253-203ENST00000554329 RPGRQ92834 1020 aaKnown RBP14.95□□□□□ -0.02
TMEM253-203ENST00000554329 RGL2O15211 777 aa14.94□□□□□ -0.02
TMEM253-203ENST00000554329 GOLGA2Q08379 1002 aa14.94□□□□□ -0.02
TMEM253-203ENST00000554329 PARP10Q53GL7 1025 aa14.94□□□□□ -0.02
TMEM253-203ENST00000554329 CCDC30Q5VVM6 783 aa14.94□□□□□ -0.02
TMEM253-203ENST00000554329 MIER1Q8N108 512 aa14.94□□□□□ -0.02
TMEM253-203ENST00000554329 C7orf43Q8WVR3 580 aa14.94□□□□□ -0.02
TMEM253-203ENST00000554329 ISCA1Q9BUE6 129 aa14.94□□□□□ -0.02
TMEM253-203ENST00000554329 ZNF277Q9NRM2 450 aaPredicted RBP14.94□□□□□ -0.02
TMEM253-203ENST00000554329 LMNB1P20700 586 aa14.93□□□□□ -0.02
TMEM253-203ENST00000554329 CRY2Q49AN0 593 aa14.93□□□□□ -0.02
TMEM253-203ENST00000554329 HSP90AB3PQ58FF7 597 aa14.93□□□□□ -0.02
TMEM253-203ENST00000554329 WDR63Q8IWG1 891 aa14.93□□□□□ -0.02
TMEM253-203ENST00000554329 CCDC85AQ96PX6 553 aaPredicted RBP14.93□□□□□ -0.02
TMEM253-203ENST00000554329 MAP3K2Q9Y2U5 619 aa14.93□□□□□ -0.02
TMEM253-203ENST00000554329 IBTKQ9P2D0 1353 aaPredicted RBP14.93□□□□□ -0.02
TMEM253-203ENST00000554329 ABCC4O15439 1325 aa14.92□□□□□ -0.02
TMEM253-203ENST00000554329 IL16Q14005 1332 aa14.92□□□□□ -0.02
TMEM253-203ENST00000554329 KIF3CO14782 793 aa14.92□□□□□ -0.02
TMEM253-203ENST00000554329 SLC4A2P04920 1241 aa14.92□□□□□ -0.02
TMEM253-203ENST00000554329 C1QTNF8P60827 252 aa14.92□□□□□ -0.02
TMEM253-203ENST00000554329 CDCA7LQ96GN5 454 aa14.92□□□□□ -0.02
TMEM253-203ENST00000554329 TAOK3Q9H2K8 898 aa14.92□□□□□ -0.02
TMEM253-203ENST00000554329 DICER1Q9UPY3 1922 aaKnown RBP14.92□□□□□ -0.02
TMEM253-203ENST00000554329 SH3TC1Q8TE82 1336 aa14.92□□□□□ -0.02
TMEM253-203ENST00000554329 COL4A5P29400 1685 aa14.91□□□□□ -0.02
TMEM253-203ENST00000554329 PI4KAP2A4QPH2 592 aa14.91□□□□□ -0.02
TMEM253-203ENST00000554329 PPEF1O14829 653 aaPredicted RBP14.91□□□□□ -0.02
TMEM253-203ENST00000554329 VAMP4O75379 141 aa14.91□□□□□ -0.02
TMEM253-203ENST00000554329 CWF19L2Q2TBE0 894 aaKnown RBP14.91□□□□□ -0.02
TMEM253-203ENST00000554329 CCDC93Q567U6 631 aa14.91□□□□□ -0.02
TMEM253-203ENST00000554329 DIEXFQ68CQ4 756 aaKnown RBP14.91□□□□□ -0.02
TMEM253-203ENST00000554329 PI4KAP1Q8N8J0 262 aa14.91□□□□□ -0.02
TMEM253-203ENST00000554329 NLRP3Q96P20 1036 aa14.91□□□□□ -0.02
TMEM253-203ENST00000554329 STK31Q9BXU1 1019 aa14.91□□□□□ -0.02
TMEM253-203ENST00000554329 RRAGCQ9HB90 399 aa14.91□□□□□ -0.02
TMEM253-203ENST00000554329 PDZRN3Q9UPQ7 1066 aa14.91□□□□□ -0.02
TMEM253-203ENST00000554329 ZNF521Q96K83 1311 aa14.91□□□□□ -0.02
TMEM253-203ENST00000554329 RBM17Q96I25 401 aaKnown RBP14.9□□□□□ -0.02
TMEM253-203ENST00000554329 RIC1Q4ADV7 1423 aa14.9□□□□□ -0.02
TMEM253-203ENST00000554329 F6X3S4 739 aa14.89□□□□□ -0.03
TMEM253-203ENST00000554329 IGKV5-2P06315 115 aa14.89□□□□□ -0.03
TMEM253-203ENST00000554329 SNED1Q8TER0 1413 aa14.89□□□□□ -0.03
TMEM253-203ENST00000554329 SPEF2Q9C093 1822 aa14.88□□□□□ -0.03
TMEM253-203ENST00000554329 IRS4O14654 1257 aaPredicted RBP14.88□□□□□ -0.03
TMEM253-203ENST00000554329 ALDH1B1P30837 517 aa14.88□□□□□ -0.03
TMEM253-203ENST00000554329 FLIIQ13045 1269 aa14.88□□□□□ -0.03
TMEM253-203ENST00000554329 SLC10A5Q5PT55 438 aa14.88□□□□□ -0.03
TMEM253-203ENST00000554329 METTL22Q9BUU2 404 aaPredicted RBP14.88□□□□□ -0.03
TMEM253-203ENST00000554329 ZNF541Q9H0D2 1346 aa14.88□□□□□ -0.03
TMEM253-203ENST00000554329 DDNO94850 711 aaPredicted RBP14.87□□□□□ -0.03
TMEM253-203ENST00000554329 HOXA10P31260 410 aaPredicted RBP14.87□□□□□ -0.03
TMEM253-203ENST00000554329 FKBP4Q02790 459 aaKnown RBP eCLIP14.87□□□□□ -0.03
TMEM253-203ENST00000554329 FKBP5Q13451 457 aaPredicted RBP14.87□□□□□ -0.03
TMEM253-203ENST00000554329 KSR2Q6VAB6 950 aa14.87□□□□□ -0.03
TMEM253-203ENST00000554329 CELF1Q92879 486 aaKnown RBP14.87□□□□□ -0.03
TMEM253-203ENST00000554329 BCL2L13Q9BXK5 485 aa14.87□□□□□ -0.03
TMEM253-203ENST00000554329 SEC31BQ9NQW1 1179 aa14.87□□□□□ -0.03
TMEM253-203ENST00000554329 DDX58O95786 925 aaKnown RBP14.86□□□□□ -0.03
TMEM253-203ENST00000554329 GPR101Q96P66 508 aaPredicted RBP14.86□□□□□ -0.03
TMEM253-203ENST00000554329 CRAMP1Q96RY5 1269 aa14.86□□□□□ -0.03
TMEM253-203ENST00000554329 MYH16Q9H6N6 1097 aa14.86□□□□□ -0.03
TMEM253-203ENST00000554329 CWC25Q9NXE8 425 aaPredicted RBP14.86□□□□□ -0.03
TMEM253-203ENST00000554329 CCER2I3L3R5 266 aa14.85□□□□□ -0.03
TMEM253-203ENST00000554329 NCBP3Q53F19 620 aaKnown RBP14.85□□□□□ -0.03
TMEM253-203ENST00000554329 DDX46Q7L014 1031 aaKnown RBP14.85□□□□□ -0.03
TMEM253-203ENST00000554329 LTBP3Q9NS15 1303 aa14.85□□□□□ -0.03
TMEM253-203ENST00000554329 GLTPD2A6NH11 291 aa14.84□□□□□ -0.03
TMEM253-203ENST00000554329 IARSP41252 1262 aaKnown RBP14.84□□□□□ -0.03
TMEM253-203ENST00000554329 GRAPQ13588 217 aa14.84□□□□□ -0.03
TMEM253-203ENST00000554329 AOC3Q16853 763 aa14.84□□□□□ -0.03
TMEM253-203ENST00000554329 SOGA3Q5TF21 947 aa14.84□□□□□ -0.03
TMEM253-203ENST00000554329 ZBTB38Q8NAP3 1195 aaPredicted RBP14.84□□□□□ -0.03
TMEM253-203ENST00000554329 GRAPLQ8TC17 118 aaPredicted RBP14.84□□□□□ -0.03
TMEM253-203ENST00000554329 DUOX1Q9NRD9 1551 aa14.83□□□□□ -0.04
TMEM253-203ENST00000554329 NEURL1BA8MQ27 555 aa14.83□□□□□ -0.04
TMEM253-203ENST00000554329 POTECB2RU33 542 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms