RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 PARP10Q53GL7 1025 aa15.49■□□□□ 0.07
TRAPPC6B-204ENST00000554018 HDGFL1Q5TGJ6 251 aa15.49■□□□□ 0.07
TRAPPC6B-204ENST00000554018 DPY19L2Q6NUT2 758 aa15.49■□□□□ 0.07
TRAPPC6B-204ENST00000554018 C3orf67Q6ZVT6 689 aa15.49■□□□□ 0.07
TRAPPC6B-204ENST00000554018 PPP1R42Q7Z4L9 355 aa15.49■□□□□ 0.07
TRAPPC6B-204ENST00000554018 RPGRQ92834 1020 aaKnown RBP15.49■□□□□ 0.07
TRAPPC6B-204ENST00000554018 ZNF277Q9NRM2 450 aaPredicted RBP15.49■□□□□ 0.07
TRAPPC6B-204ENST00000554018 MBIPQ9NS73 344 aa15.49■□□□□ 0.07
TRAPPC6B-204ENST00000554018 RIC1Q4ADV7 1423 aa15.49■□□□□ 0.07
TRAPPC6B-204ENST00000554018 TAF1P21675 1872 aa15.48■□□□□ 0.07
TRAPPC6B-204ENST00000554018 POTECB2RU33 542 aa15.48■□□□□ 0.07
TRAPPC6B-204ENST00000554018 ZNF853P0CG23 659 aa15.48■□□□□ 0.07
TRAPPC6B-204ENST00000554018 FKBP4Q02790 459 aaKnown RBP eCLIP15.48■□□□□ 0.07
TRAPPC6B-204ENST00000554018 FSTL1Q12841 308 aa15.48■□□□□ 0.07
TRAPPC6B-204ENST00000554018 RTKN2Q8IZC4 609 aa15.48■□□□□ 0.07
TRAPPC6B-204ENST00000554018 UTP14AQ9BVJ6 771 aaKnown RBP15.48■□□□□ 0.07
TRAPPC6B-204ENST00000554018 HOXB7P09629 217 aa15.47■□□□□ 0.07
TRAPPC6B-204ENST00000554018 DUSP27Q5VZP5 1158 aa15.47■□□□□ 0.07
TRAPPC6B-204ENST00000554018 NLRP10Q86W26 655 aa15.47■□□□□ 0.07
TRAPPC6B-204ENST00000554018 DDNO94850 711 aaPredicted RBP15.46■□□□□ 0.07
TRAPPC6B-204ENST00000554018 TCIRG1Q13488 830 aa15.46■□□□□ 0.07
TRAPPC6B-204ENST00000554018 HSP90AB3PQ58FF7 597 aa15.46■□□□□ 0.07
TRAPPC6B-204ENST00000554018 SLC10A5Q5PT55 438 aa15.46■□□□□ 0.07
TRAPPC6B-204ENST00000554018 SLC51AQ86UW1 340 aa15.46■□□□□ 0.07
TRAPPC6B-204ENST00000554018 SYNE4Q8N205 404 aa15.46■□□□□ 0.07
TRAPPC6B-204ENST00000554018 SMC1BQ8NDV3 1235 aa15.46■□□□□ 0.07
TRAPPC6B-204ENST00000554018 RBM17Q96I25 401 aaKnown RBP15.46■□□□□ 0.07
TRAPPC6B-204ENST00000554018 NLRP3Q96P20 1036 aa15.46■□□□□ 0.07
TRAPPC6B-204ENST00000554018 IFT57Q9NWB7 429 aa15.46■□□□□ 0.07
TRAPPC6B-204ENST00000554018 SNED1Q8TER0 1413 aa15.45■□□□□ 0.06
TRAPPC6B-204ENST00000554018 TCERG1O14776 1098 aaKnown RBP15.45■□□□□ 0.06
TRAPPC6B-204ENST00000554018 GNAI1P63096 354 aa15.45■□□□□ 0.06
TRAPPC6B-204ENST00000554018 HTRA3P83110 453 aa15.45■□□□□ 0.06
TRAPPC6B-204ENST00000554018 ZNF428Q96B54 188 aa15.45■□□□□ 0.06
TRAPPC6B-204ENST00000554018 CRAMP1Q96RY5 1269 aa15.45■□□□□ 0.06
TRAPPC6B-204ENST00000554018 DBF4Q9UBU7 674 aaPredicted RBP15.45■□□□□ 0.06
TRAPPC6B-204ENST00000554018 ZNF316A6NFI3 1004 aaPredicted RBP15.44■□□□□ 0.06
TRAPPC6B-204ENST00000554018 ELL2O00472 640 aaPredicted RBP15.44■□□□□ 0.06
TRAPPC6B-204ENST00000554018 HCLS1P14317 486 aaPredicted RBP15.44■□□□□ 0.06
TRAPPC6B-204ENST00000554018 CALD1Q05682 793 aaKnown RBP15.44■□□□□ 0.06
TRAPPC6B-204ENST00000554018 DNAJC5GQ8N7S2 189 aa15.44■□□□□ 0.06
TRAPPC6B-204ENST00000554018 SCN4AP35499 1836 aa15.44■□□□□ 0.06
TRAPPC6B-204ENST00000554018 DDX60Q8IY21 1712 aaKnown RBP15.43■□□□□ 0.06
TRAPPC6B-204ENST00000554018 IARSP41252 1262 aaKnown RBP15.43■□□□□ 0.06
TRAPPC6B-204ENST00000554018 CC2D2BQ6DHV5 1058 aa15.43■□□□□ 0.06
TRAPPC6B-204ENST00000554018 ANKRD13DQ6ZTN6 518 aa15.43■□□□□ 0.06
TRAPPC6B-204ENST00000554018 PLBD2Q8NHP8 589 aa15.43■□□□□ 0.06
TRAPPC6B-204ENST00000554018 PSMD1Q99460 953 aa15.43■□□□□ 0.06
TRAPPC6B-204ENST00000554018 HYPKQ9NX55 129 aa15.43■□□□□ 0.06
TRAPPC6B-204ENST00000554018 TRMT112Q9UI30 125 aaKnown RBP15.43■□□□□ 0.06
TRAPPC6B-204ENST00000554018 RNF123Q5XPI4 1314 aa15.43■□□□□ 0.06
TRAPPC6B-204ENST00000554018 ZNF541Q9H0D2 1346 aa15.43■□□□□ 0.06
TRAPPC6B-204ENST00000554018 PPEF1O14829 653 aaPredicted RBP15.42■□□□□ 0.06
TRAPPC6B-204ENST00000554018 C8orf58Q8NAV2 365 aa15.42■□□□□ 0.06
TRAPPC6B-204ENST00000554018 COL4A5P29400 1685 aa15.41■□□□□ 0.06
TRAPPC6B-204ENST00000554018 ATP5J2-PTCD1G3V325 749 aa15.41■□□□□ 0.06
TRAPPC6B-204ENST00000554018 ISCA1Q9BUE6 129 aa15.41■□□□□ 0.06
TRAPPC6B-204ENST00000554018 ABCC4O15439 1325 aa15.41■□□□□ 0.06
TRAPPC6B-204ENST00000554018 SH3TC1Q8TE82 1336 aa15.41■□□□□ 0.06
TRAPPC6B-204ENST00000554018 PHAXQ9H814 394 aaKnown RBP15.4■□□□□ 0.06
TRAPPC6B-204ENST00000554018 FZD9O00144 591 aa15.39■□□□□ 0.05
TRAPPC6B-204ENST00000554018 POTEIP0CG38 1075 aa15.39■□□□□ 0.05
TRAPPC6B-204ENST00000554018 POTEJP0CG39 1038 aa15.39■□□□□ 0.05
TRAPPC6B-204ENST00000554018 GRIPAP1Q4V328 841 aa15.39■□□□□ 0.05
TRAPPC6B-204ENST00000554018 JDP2Q8WYK2 163 aa15.39■□□□□ 0.05
TRAPPC6B-204ENST00000554018 FAM89AQ96GI7 184 aa15.39■□□□□ 0.05
TRAPPC6B-204ENST00000554018 L3MBTL3Q96JM7 780 aaPredicted RBP15.39■□□□□ 0.05
TRAPPC6B-204ENST00000554018 MRS2Q9HD23 443 aa15.39■□□□□ 0.05
TRAPPC6B-204ENST00000554018 ATP6V0A2Q9Y487 856 aa15.39■□□□□ 0.05
TRAPPC6B-204ENST00000554018 ANP32CO43423 234 aa15.38■□□□□ 0.05
TRAPPC6B-204ENST00000554018 TSR2Q969E8 191 aaKnown RBP15.38■□□□□ 0.05
TRAPPC6B-204ENST00000554018 TAF1DQ9H5J8 278 aaPredicted RBP15.38■□□□□ 0.05
TRAPPC6B-204ENST00000554018 IQCA1LA6NCM1 817 aa15.37■□□□□ 0.05
TRAPPC6B-204ENST00000554018 BBOX1O75936 387 aa15.37■□□□□ 0.05
TRAPPC6B-204ENST00000554018 GOLGA2Q08379 1002 aa15.37■□□□□ 0.05
TRAPPC6B-204ENST00000554018 RTL5Q5HYW3 569 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC6B-204ENST00000554018 CHADLQ6NUI6 762 aa15.37■□□□□ 0.05
TRAPPC6B-204ENST00000554018 DDX46Q7L014 1031 aaKnown RBP15.37■□□□□ 0.05
TRAPPC6B-204ENST00000554018 RIC3Q7Z5B4 369 aa15.37■□□□□ 0.05
TRAPPC6B-204ENST00000554018 WWC1Q8IX03 1113 aa15.37■□□□□ 0.05
TRAPPC6B-204ENST00000554018 LARGE2Q8N3Y3 721 aa15.37■□□□□ 0.05
TRAPPC6B-204ENST00000554018 TSPYL6Q8N831 410 aa15.37■□□□□ 0.05
TRAPPC6B-204ENST00000554018 TMX4Q9H1E5 349 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC6B-204ENST00000554018 TRIM28Q13263 835 aaKnown RBP15.36■□□□□ 0.05
TRAPPC6B-204ENST00000554018 CCDC27Q2M243 656 aa15.36■□□□□ 0.05
TRAPPC6B-204ENST00000554018 SP8Q8IXZ3 490 aa15.36■□□□□ 0.05
TRAPPC6B-204ENST00000554018 KLRG1Q96E93 195 aa15.36■□□□□ 0.05
TRAPPC6B-204ENST00000554018 CACNA1FO60840 1977 aa15.35■□□□□ 0.05
TRAPPC6B-204ENST00000554018 EIF6P56537 245 aaKnown RBP15.35■□□□□ 0.05
TRAPPC6B-204ENST00000554018 GRAPQ13588 217 aa15.35■□□□□ 0.05
TRAPPC6B-204ENST00000554018 CCDC30Q5VVM6 783 aa15.35■□□□□ 0.05
TRAPPC6B-204ENST00000554018 GPC2Q8N158 579 aa15.35■□□□□ 0.05
TRAPPC6B-204ENST00000554018 GRAPLQ8TC17 118 aaPredicted RBP15.35■□□□□ 0.05
TRAPPC6B-204ENST00000554018 HACL1Q9UJ83 578 aa15.35■□□□□ 0.05
TRAPPC6B-204ENST00000554018 GJA3Q9Y6H8 435 aa15.35■□□□□ 0.05
TRAPPC6B-204ENST00000554018 COL4A1P02462 1669 aa15.35■□□□□ 0.05
TRAPPC6B-204ENST00000554018 LRRC37AA6NMS7 1700 aa15.34■□□□□ 0.05
TRAPPC6B-204ENST00000554018 PPIP5K2O43314 1243 aa15.34■□□□□ 0.05
TRAPPC6B-204ENST00000554018 AOC3Q16853 763 aa15.34■□□□□ 0.05
TRAPPC6B-204ENST00000554018 EAPPQ56P03 285 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms