RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 SF3A1Q15459 793 aaKnown RBP6.07□□□□□ -1.44
TDP1-207ENST00000553617 LCE2AQ5TA79 106 aaPredicted RBP6.07□□□□□ -1.44
TDP1-207ENST00000553617 XKR5Q6UX68 686 aa6.07□□□□□ -1.44
TDP1-207ENST00000553617 CRIPAKQ8N1N5 446 aa6.07□□□□□ -1.44
TDP1-207ENST00000553617 RHPN1Q8TCX5 695 aa6.07□□□□□ -1.44
TDP1-207ENST00000553617 HPS1Q92902 700 aa6.07□□□□□ -1.44
TDP1-207ENST00000553617 RNF34Q969K3 372 aa6.07□□□□□ -1.44
TDP1-207ENST00000553617 SUSD3Q96L08 255 aa6.07□□□□□ -1.44
TDP1-207ENST00000553617 TINF2Q9BSI4 451 aa6.07□□□□□ -1.44
TDP1-207ENST00000553617 TGIF2Q9GZN2 237 aa6.07□□□□□ -1.44
TDP1-207ENST00000553617 AK5Q9Y6K8 562 aa6.07□□□□□ -1.44
TDP1-207ENST00000553617 TTC24A2A3L6 582 aaPredicted RBP6.06□□□□□ -1.44
TDP1-207ENST00000553617 NEFLP07196 543 aa6.06□□□□□ -1.44
TDP1-207ENST00000553617 ATP4AP20648 1035 aa6.06□□□□□ -1.44
TDP1-207ENST00000553617 NBPF1Q3BBV0 1214 aa6.06□□□□□ -1.44
TDP1-207ENST00000553617 SLC27A3Q5K4L6 730 aa6.06□□□□□ -1.44
TDP1-207ENST00000553617 TREML4Q6UXN2 200 aa6.06□□□□□ -1.44
TDP1-207ENST00000553617 ZNF280CQ8ND82 737 aa6.06□□□□□ -1.44
TDP1-207ENST00000553617 UBXN4Q92575 508 aa6.06□□□□□ -1.44
TDP1-207ENST00000553617 CRELD1Q96HD1 420 aa6.06□□□□□ -1.44
TDP1-207ENST00000553617 INSM2Q96T92 566 aaPredicted RBP6.06□□□□□ -1.44
TDP1-207ENST00000553617 TSEN34Q9BSV6 310 aaKnown RBP6.06□□□□□ -1.44
TDP1-207ENST00000553617 CPNE3O75131 537 aaKnown RBP6.05□□□□□ -1.44
TDP1-207ENST00000553617 AVPP01185 164 aa6.05□□□□□ -1.44
TDP1-207ENST00000553617 ZNF76P36508 570 aa6.05□□□□□ -1.44
TDP1-207ENST00000553617 IDH3AP50213 366 aa6.05□□□□□ -1.44
TDP1-207ENST00000553617 C8orf34Q49A92 452 aa6.05□□□□□ -1.44
TDP1-207ENST00000553617 CYP4X1Q8N118 509 aa6.05□□□□□ -1.44
TDP1-207ENST00000553617 HSH2DQ96JZ2 352 aa6.05□□□□□ -1.44
TDP1-207ENST00000553617 TNFRSF21O75509 655 aa6.04□□□□□ -1.44
TDP1-207ENST00000553617 INPP5BP32019 993 aa6.04□□□□□ -1.44
TDP1-207ENST00000553617 CTSOP43234 321 aaPredicted RBP6.04□□□□□ -1.44
TDP1-207ENST00000553617 TRIP4Q15650 581 aaPredicted RBP6.04□□□□□ -1.44
TDP1-207ENST00000553617 LINC00528Q8N1L1 170 aa6.04□□□□□ -1.44
TDP1-207ENST00000553617 SLC43A3Q8NBI5 491 aa6.04□□□□□ -1.44
TDP1-207ENST00000553617 FOXD3Q9UJU5 478 aaPredicted RBP6.04□□□□□ -1.44
TDP1-207ENST00000553617 SPG7Q9UQ90 795 aa6.04□□□□□ -1.44
TDP1-207ENST00000553617 KCNMB2Q9Y691 235 aa6.04□□□□□ -1.44
TDP1-207ENST00000553617 GRNP28799 593 aaKnown RBP6.03□□□□□ -1.44
TDP1-207ENST00000553617 ARSDP51689 593 aa6.03□□□□□ -1.44
TDP1-207ENST00000553617 PTPN12Q05209 780 aaKnown RBP6.03□□□□□ -1.44
TDP1-207ENST00000553617 WDR44Q5JSH3 913 aa6.03□□□□□ -1.44
TDP1-207ENST00000553617 USPL1Q5W0Q7 1092 aa6.03□□□□□ -1.44
TDP1-207ENST00000553617 PDE12Q6L8Q7 609 aaKnown RBP6.03□□□□□ -1.44
TDP1-207ENST00000553617 NBPF10Q6P3W6 841 aaKnown RBP6.03□□□□□ -1.44
TDP1-207ENST00000553617 BTLAQ7Z6A9 289 aa6.03□□□□□ -1.44
TDP1-207ENST00000553617 RNF217Q8TC41 542 aa6.03□□□□□ -1.44
TDP1-207ENST00000553617 SNX29Q8TEQ0 813 aa6.03□□□□□ -1.44
TDP1-207ENST00000553617 ANKIB1Q9P2G1 1089 aa6.03□□□□□ -1.44
TDP1-207ENST00000553617 DACH1Q9UI36 760 aa6.03□□□□□ -1.44
TDP1-207ENST00000553617 GIPC1O14908 333 aa6.02□□□□□ -1.45
TDP1-207ENST00000553617 TATP17735 454 aaPredicted RBP6.02□□□□□ -1.45
TDP1-207ENST00000553617 EIF4BP23588 611 aaKnown RBP6.02□□□□□ -1.45
TDP1-207ENST00000553617 PHKA2P46019 1235 aa6.02□□□□□ -1.45
TDP1-207ENST00000553617 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.02□□□□□ -1.45
TDP1-207ENST00000553617 PI16Q6UXB8 463 aa6.02□□□□□ -1.45
TDP1-207ENST00000553617 CCDC74AQ96AQ1 378 aa6.02□□□□□ -1.45
TDP1-207ENST00000553617 AIDAQ96BJ3 306 aa6.02□□□□□ -1.45
TDP1-207ENST00000553617 ZIC5Q96T25 663 aa6.02□□□□□ -1.45
TDP1-207ENST00000553617 OSBPL7Q9BZF2 842 aa6.02□□□□□ -1.45
TDP1-207ENST00000553617 C12orf49Q9H741 205 aa6.02□□□□□ -1.45
TDP1-207ENST00000553617 POLMQ9NP87 494 aaPredicted RBP6.02□□□□□ -1.45
TDP1-207ENST00000553617 USP20Q9Y2K6 914 aa6.02□□□□□ -1.45
TDP1-207ENST00000553617 USP31Q70CQ4 1352 aa6.02□□□□□ -1.45
TDP1-207ENST00000553617 TTBK1Q5TCY1 1321 aaPredicted RBP6.01□□□□□ -1.45
TDP1-207ENST00000553617 IRS1P35568 1242 aa6.01□□□□□ -1.45
TDP1-207ENST00000553617 SMCPP49901 116 aaPredicted RBP6.01□□□□□ -1.45
TDP1-207ENST00000553617 POU4F2Q12837 409 aa6.01□□□□□ -1.45
TDP1-207ENST00000553617 CTC1Q2NKJ3 1217 aa6.01□□□□□ -1.45
TDP1-207ENST00000553617 TTC16Q8NEE8 873 aa6.01□□□□□ -1.45
TDP1-207ENST00000553617 GMLQ99445 158 aa6.01□□□□□ -1.45
TDP1-207ENST00000553617 ACBD3Q9H3P7 528 aa6.01□□□□□ -1.45
TDP1-207ENST00000553617 CCSER2Q9H7U1 834 aa6.01□□□□□ -1.45
TDP1-207ENST00000553617 ZFYVE28Q9HCC9 887 aa6.01□□□□□ -1.45
TDP1-207ENST00000553617 DDX41Q9UJV9 622 aaKnown RBP6.01□□□□□ -1.45
TDP1-207ENST00000553617 FNDC3AQ9Y2H6 1198 aaKnown RBP6.01□□□□□ -1.45
TDP1-207ENST00000553617 RTCBQ9Y3I0 505 aaKnown RBP6.01□□□□□ -1.45
TDP1-207ENST00000553617 AXIN1O15169 862 aa6□□□□□ -1.45
TDP1-207ENST00000553617 TYRO3Q06418 890 aa6□□□□□ -1.45
TDP1-207ENST00000553617 BICDL1Q6ZP65 573 aa6□□□□□ -1.45
TDP1-207ENST00000553617 ZNF438Q7Z4V0 828 aa6□□□□□ -1.45
TDP1-207ENST00000553617 EPS8L3Q8TE67 593 aaKnown RBP6□□□□□ -1.45
TDP1-207ENST00000553617 CHRDQ9H2X0 955 aa6□□□□□ -1.45
TDP1-207ENST00000553617 NLRP2Q9NX02 1062 aa6□□□□□ -1.45
TDP1-207ENST00000553617 TMEM63CQ9P1W3 806 aa6□□□□□ -1.45
TDP1-207ENST00000553617 GMPR2Q9P2T1 348 aaKnown RBP6□□□□□ -1.45
TDP1-207ENST00000553617 EPB41L3Q9Y2J2 1087 aaPredicted RBP6□□□□□ -1.45
TDP1-207ENST00000553617 A0A1B0GTH6 734 aa5.99□□□□□ -1.45
TDP1-207ENST00000553617 UBAP1LF5GYI3 381 aa5.99□□□□□ -1.45
TDP1-207ENST00000553617 CAPN5O15484 640 aaPredicted RBP5.99□□□□□ -1.45
TDP1-207ENST00000553617 EGFRP00533 1210 aa5.99□□□□□ -1.45
TDP1-207ENST00000553617 BMP1P13497 986 aa5.99□□□□□ -1.45
TDP1-207ENST00000553617 MSX1P28360 303 aa5.99□□□□□ -1.45
TDP1-207ENST00000553617 RACK1P63244 317 aaKnown RBP5.99□□□□□ -1.45
TDP1-207ENST00000553617 LYSMD3Q7Z3D4 306 aa5.99□□□□□ -1.45
TDP1-207ENST00000553617 PRICKLE2Q7Z3G6 844 aa5.99□□□□□ -1.45
TDP1-207ENST00000553617 CMTR1Q8N1G2 835 aaKnown RBP5.99□□□□□ -1.45
TDP1-207ENST00000553617 ELP3Q9H9T3 547 aa5.99□□□□□ -1.45
TDP1-207ENST00000553617 CAPN10Q9HC96 672 aa5.99□□□□□ -1.45
TDP1-207ENST00000553617 SRA1Q9HD15 236 aaKnown RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms