RNA–Protein interactions for RNA: ENST00000553609.5

NEDD1-205, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-205ENST00000553609 TTLL7Q6ZT98 887 aa18.91■□□□□ 0.62
NEDD1-205ENST00000553609 THSD7BQ9C0I4 1608 aa18.91■□□□□ 0.62
NEDD1-205ENST00000553609 MAP3K15Q6ZN16 1313 aa18.91■□□□□ 0.62
NEDD1-205ENST00000553609 NUP98P52948 1817 aa18.9■□□□□ 0.62
NEDD1-205ENST00000553609 CC2D2BQ6DHV5 1058 aa18.9■□□□□ 0.62
NEDD1-205ENST00000553609 AIDAQ96BJ3 306 aa18.9■□□□□ 0.62
NEDD1-205ENST00000553609 HSPA8P11142 646 aaKnown RBP18.89■□□□□ 0.61
NEDD1-205ENST00000553609 GTF2E1P29083 439 aaPredicted RBP18.89■□□□□ 0.61
NEDD1-205ENST00000553609 SCNN1DP51172 638 aa18.89■□□□□ 0.61
NEDD1-205ENST00000553609 LBX1P52954 281 aa18.89■□□□□ 0.61
NEDD1-205ENST00000553609 DEFB115Q30KQ5 88 aa18.89■□□□□ 0.61
NEDD1-205ENST00000553609 NYXQ9GZU5 481 aa18.89■□□□□ 0.61
NEDD1-205ENST00000553609 EIF4A1P60842 406 aaKnown RBP18.88■□□□□ 0.61
NEDD1-205ENST00000553609 C3orf67Q6ZVT6 689 aa18.88■□□□□ 0.61
NEDD1-205ENST00000553609 NGEFQ8N5V2 710 aa18.88■□□□□ 0.61
NEDD1-205ENST00000553609 JDP2Q8WYK2 163 aa18.88■□□□□ 0.61
NEDD1-205ENST00000553609 DDX21Q9NR30 783 aaKnown RBP eCLIP18.88■□□□□ 0.61
NEDD1-205ENST00000553609 WDR33Q9C0J8 1336 aaKnown RBP18.88■□□□□ 0.61
NEDD1-205ENST00000553609 FMR1Q06787 632 aaKnown RBP eCLIP18.87■□□□□ 0.61
NEDD1-205ENST00000553609 SUSD4Q5VX71 490 aa18.87■□□□□ 0.61
NEDD1-205ENST00000553609 ZNF34Q8IZ26 560 aa18.87■□□□□ 0.61
NEDD1-205ENST00000553609 DLG5Q8TDM6 1919 aa18.87■□□□□ 0.61
NEDD1-205ENST00000553609 NTSR2O95665 410 aa18.86■□□□□ 0.61
NEDD1-205ENST00000553609 GPTP24298 496 aa18.86■□□□□ 0.61
NEDD1-205ENST00000553609 EPS15P42566 896 aa18.86■□□□□ 0.61
NEDD1-205ENST00000553609 EIF6P56537 245 aaKnown RBP18.86■□□□□ 0.61
NEDD1-205ENST00000553609 CRAMP1Q96RY5 1269 aa18.86■□□□□ 0.61
NEDD1-205ENST00000553609 GJA3Q9Y6H8 435 aa18.86■□□□□ 0.61
NEDD1-205ENST00000553609 LRP10Q7Z4F1 713 aa18.85■□□□□ 0.61
NEDD1-205ENST00000553609 PNISRQ8TF01 805 aaKnown RBP18.85■□□□□ 0.61
NEDD1-205ENST00000553609 RPGRQ92834 1020 aaKnown RBP18.85■□□□□ 0.61
NEDD1-205ENST00000553609 PLEKHF1Q96S99 279 aa18.85■□□□□ 0.61
NEDD1-205ENST00000553609 THUMPD2Q9BTF0 503 aaKnown RBP18.85■□□□□ 0.61
NEDD1-205ENST00000553609 ZBTB3Q9H5J0 574 aa18.85■□□□□ 0.61
NEDD1-205ENST00000553609 RRP7AQ9Y3A4 280 aaKnown RBP18.85■□□□□ 0.61
NEDD1-205ENST00000553609 GRIPAP1Q4V328 841 aa18.84■□□□□ 0.61
NEDD1-205ENST00000553609 KIF6Q6ZMV9 814 aa18.84■□□□□ 0.61
NEDD1-205ENST00000553609 ABT1Q9ULW3 272 aaKnown RBP18.84■□□□□ 0.61
NEDD1-205ENST00000553609 PPEF1O14829 653 aaPredicted RBP18.83■□□□□ 0.6
NEDD1-205ENST00000553609 MYL6BP14649 208 aa18.83■□□□□ 0.6
NEDD1-205ENST00000553609 LMOD1P29536 600 aaPredicted RBP18.83■□□□□ 0.6
NEDD1-205ENST00000553609 CST9Q5W186 159 aa18.83■□□□□ 0.6
NEDD1-205ENST00000553609 LARGE2Q8N3Y3 721 aa18.83■□□□□ 0.6
NEDD1-205ENST00000553609 MAP2K1Q02750 393 aaPredicted RBP18.82■□□□□ 0.6
NEDD1-205ENST00000553609 GIGYF2Q6Y7W6 1299 aaKnown RBP18.82■□□□□ 0.6
NEDD1-205ENST00000553609 ERBB4Q15303 1308 aa18.81■□□□□ 0.6
NEDD1-205ENST00000553609 TRAF5O00463 557 aa18.81■□□□□ 0.6
NEDD1-205ENST00000553609 NFE2L2Q16236 605 aa18.81■□□□□ 0.6
NEDD1-205ENST00000553609 USP50Q70EL3 339 aaPredicted RBP18.81■□□□□ 0.6
NEDD1-205ENST00000553609 ABHD8Q96I13 439 aa18.81■□□□□ 0.6
NEDD1-205ENST00000553609 RBM17Q96I25 401 aaKnown RBP18.81■□□□□ 0.6
NEDD1-205ENST00000553609 CAPNS2Q96L46 248 aa18.81■□□□□ 0.6
NEDD1-205ENST00000553609 TCERG1O14776 1098 aaKnown RBP18.8■□□□□ 0.6
NEDD1-205ENST00000553609 PDIA6Q15084 440 aa18.8■□□□□ 0.6
NEDD1-205ENST00000553609 PPIP5K2O43314 1243 aa18.79■□□□□ 0.6
NEDD1-205ENST00000553609 AOC3Q16853 763 aa18.79■□□□□ 0.6
NEDD1-205ENST00000553609 SLC10A5Q5PT55 438 aa18.79■□□□□ 0.6
NEDD1-205ENST00000553609 CYP4F22Q6NT55 531 aa18.79■□□□□ 0.6
NEDD1-205ENST00000553609 NIM1KQ8IY84 436 aa18.79■□□□□ 0.6
NEDD1-205ENST00000553609 RTFDC1Q9BY42 306 aaPredicted RBP18.79■□□□□ 0.6
NEDD1-205ENST00000553609 GPRC5DQ9NZD1 345 aa18.79■□□□□ 0.6
NEDD1-205ENST00000553609 ATP6V0A2Q9Y487 856 aa18.79■□□□□ 0.6
NEDD1-205ENST00000553609 TLL2Q9Y6L7 1015 aa18.79■□□□□ 0.6
NEDD1-205ENST00000553609 ABCC4O15439 1325 aa18.78■□□□□ 0.6
NEDD1-205ENST00000553609 TRPM7Q96QT4 1865 aa18.78■□□□□ 0.6
NEDD1-205ENST00000553609 PARP10Q53GL7 1025 aa18.78■□□□□ 0.6
NEDD1-205ENST00000553609 CXCL9Q07325 125 aa18.77■□□□□ 0.6
NEDD1-205ENST00000553609 PROSER3Q2NL68 480 aa18.77■□□□□ 0.6
NEDD1-205ENST00000553609 GPR101Q96P66 508 aaPredicted RBP18.77■□□□□ 0.6
NEDD1-205ENST00000553609 VPS33BQ9H267 617 aa18.77■□□□□ 0.6
NEDD1-205ENST00000553609 ADARB2Q9NS39 739 aaKnown RBP18.77■□□□□ 0.6
NEDD1-205ENST00000553609 ECE1P42892 770 aa18.76■□□□□ 0.59
NEDD1-205ENST00000553609 PPP1R42Q7Z4L9 355 aa18.76■□□□□ 0.59
NEDD1-205ENST00000553609 NLRP3Q96P20 1036 aa18.76■□□□□ 0.59
NEDD1-205ENST00000553609 GMPSP49915 693 aaPredicted RBP18.75■□□□□ 0.59
NEDD1-205ENST00000553609 PGAP2Q9UHJ9 254 aa18.75■□□□□ 0.59
NEDD1-205ENST00000553609 ZNRF3Q9ULT6 936 aa18.75■□□□□ 0.59
NEDD1-205ENST00000553609 LAMB2P55268 1798 aa18.75■□□□□ 0.59
NEDD1-205ENST00000553609 DUOX1Q9NRD9 1551 aa18.74■□□□□ 0.59
NEDD1-205ENST00000553609 AOC2O75106 756 aa18.74■□□□□ 0.59
NEDD1-205ENST00000553609 ANXA1P04083 346 aa18.74■□□□□ 0.59
NEDD1-205ENST00000553609 NEFMP07197 916 aa18.74■□□□□ 0.59
NEDD1-205ENST00000553609 PAXIP1Q6ZW49 1069 aaPredicted RBP18.74■□□□□ 0.59
NEDD1-205ENST00000553609 SAPCD2Q86UD0 394 aa18.74■□□□□ 0.59
NEDD1-205ENST00000553609 UTP14AQ9BVJ6 771 aaKnown RBP18.74■□□□□ 0.59
NEDD1-205ENST00000553609 ANKRD36CQ5JPF3 1778 aa18.73■□□□□ 0.59
NEDD1-205ENST00000553609 HIRAP54198 1017 aaPredicted RBP18.73■□□□□ 0.59
NEDD1-205ENST00000553609 KIAA2012Q0VF49 1180 aa18.73■□□□□ 0.59
NEDD1-205ENST00000553609 GRM1Q13255 1194 aa18.73■□□□□ 0.59
NEDD1-205ENST00000553609 GLIS2Q9BZE0 524 aaPredicted RBP18.73■□□□□ 0.59
NEDD1-205ENST00000553609 TSPYL4Q9UJ04 414 aa18.73■□□□□ 0.59
NEDD1-205ENST00000553609 CDHR2Q9BYE9 1310 aa18.73■□□□□ 0.59
NEDD1-205ENST00000553609 MAP2K2P36507 400 aa18.72■□□□□ 0.59
NEDD1-205ENST00000553609 FAM161AQ3B820 660 aa18.72■□□□□ 0.59
NEDD1-205ENST00000553609 NLRP10Q86W26 655 aa18.72■□□□□ 0.59
NEDD1-205ENST00000553609 SP8Q8IXZ3 490 aa18.72■□□□□ 0.59
NEDD1-205ENST00000553609 TSKSQ9UJT2 592 aa18.72■□□□□ 0.59
NEDD1-205ENST00000553609 BBOX1O75936 387 aa18.71■□□□□ 0.59
NEDD1-205ENST00000553609 HCLS1P14317 486 aaPredicted RBP18.71■□□□□ 0.59
NEDD1-205ENST00000553609 EIF2S2P20042 333 aaKnown RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms