RNA–Protein interactions for RNA: ENST00000553571.5

NSFL1C-210, Transcript of NSFL1 cofactor, humanhuman

TSL 4

Gene NSFL1C, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSFL1C-210ENST00000553571 PPP1R42Q7Z4L9 355 aa13.05□□□□□ -0.32
NSFL1C-210ENST00000553571 RPGRQ92834 1020 aaKnown RBP13.05□□□□□ -0.32
NSFL1C-210ENST00000553571 ZBTB3Q9H5J0 574 aa13.05□□□□□ -0.32
NSFL1C-210ENST00000553571 CREBZFQ9NS37 354 aa13.05□□□□□ -0.32
NSFL1C-210ENST00000553571 FAM177BA6PVY3 158 aa13.04□□□□□ -0.32
NSFL1C-210ENST00000553571 NUTM1Q86Y26 1132 aa13.04□□□□□ -0.32
NSFL1C-210ENST00000553571 NGEFQ8N5V2 710 aa13.04□□□□□ -0.32
NSFL1C-210ENST00000553571 TAF1DQ9H5J8 278 aaPredicted RBP13.04□□□□□ -0.32
NSFL1C-210ENST00000553571 ZNF277Q9NRM2 450 aaPredicted RBP13.04□□□□□ -0.32
NSFL1C-210ENST00000553571 COL4A5P29400 1685 aa13.04□□□□□ -0.32
NSFL1C-210ENST00000553571 PASKQ96RG2 1323 aa13.04□□□□□ -0.32
NSFL1C-210ENST00000553571 ZNF541Q9H0D2 1346 aa13.04□□□□□ -0.32
NSFL1C-210ENST00000553571 LTBP1Q14766 1721 aa13.04□□□□□ -0.32
NSFL1C-210ENST00000553571 TAF1P21675 1872 aa13.04□□□□□ -0.32
NSFL1C-210ENST00000553571 HOXB7P09629 217 aa13.03□□□□□ -0.32
NSFL1C-210ENST00000553571 HSP90AB3PQ58FF7 597 aa13.03□□□□□ -0.32
NSFL1C-210ENST00000553571 SLC10A5Q5PT55 438 aa13.03□□□□□ -0.32
NSFL1C-210ENST00000553571 SUSD4Q5VX71 490 aa13.03□□□□□ -0.32
NSFL1C-210ENST00000553571 GPC2Q8N158 579 aa13.03□□□□□ -0.32
NSFL1C-210ENST00000553571 SYNE4Q8N205 404 aa13.03□□□□□ -0.32
NSFL1C-210ENST00000553571 JDP2Q8WYK2 163 aa13.03□□□□□ -0.32
NSFL1C-210ENST00000553571 VPS33BQ9H267 617 aa13.03□□□□□ -0.32
NSFL1C-210ENST00000553571 GPTP24298 496 aa13.02□□□□□ -0.33
NSFL1C-210ENST00000553571 OLFM4Q6UX06 510 aa13.02□□□□□ -0.33
NSFL1C-210ENST00000553571 PNMA8AQ86V59 439 aaPredicted RBP13.02□□□□□ -0.33
NSFL1C-210ENST00000553571 RBM17Q96I25 401 aaKnown RBP13.02□□□□□ -0.33
NSFL1C-210ENST00000553571 NLRP3Q96P20 1036 aa13.02□□□□□ -0.33
NSFL1C-210ENST00000553571 HACL1Q9UJ83 578 aa13.02□□□□□ -0.33
NSFL1C-210ENST00000553571 CACNA1FO60840 1977 aa13.01□□□□□ -0.33
NSFL1C-210ENST00000553571 CHL1O00533 1208 aa13.01□□□□□ -0.33
NSFL1C-210ENST00000553571 POTEIP0CG38 1075 aa13.01□□□□□ -0.33
NSFL1C-210ENST00000553571 POTEJP0CG39 1038 aa13.01□□□□□ -0.33
NSFL1C-210ENST00000553571 RUNDC1Q96C34 613 aa13.01□□□□□ -0.33
NSFL1C-210ENST00000553571 DDX21Q9NR30 783 aaKnown RBP eCLIP13.01□□□□□ -0.33
NSFL1C-210ENST00000553571 MYH3P11055 1940 aa13□□□□□ -0.33
NSFL1C-210ENST00000553571 THSD7BQ9C0I4 1608 aa13□□□□□ -0.33
NSFL1C-210ENST00000553571 CNTNAP1P78357 1384 aa13□□□□□ -0.33
NSFL1C-210ENST00000553571 PPEF1O14829 653 aaPredicted RBP13□□□□□ -0.33
NSFL1C-210ENST00000553571 EPHX2P34913 555 aa13□□□□□ -0.33
NSFL1C-210ENST00000553571 UTP14AQ9BVJ6 771 aaKnown RBP13□□□□□ -0.33
NSFL1C-210ENST00000553571 ITGBL1O95965 494 aaPredicted RBP12.99□□□□□ -0.33
NSFL1C-210ENST00000553571 EIF2S2P20042 333 aaKnown RBP12.99□□□□□ -0.33
NSFL1C-210ENST00000553571 EIF6P56537 245 aaKnown RBP12.99□□□□□ -0.33
NSFL1C-210ENST00000553571 WDR43Q15061 677 aaKnown RBP eCLIP12.99□□□□□ -0.33
NSFL1C-210ENST00000553571 PROSER3Q2NL68 480 aa12.99□□□□□ -0.33
NSFL1C-210ENST00000553571 TRIM35Q9UPQ4 493 aa12.99□□□□□ -0.33
NSFL1C-210ENST00000553571 ATP6V0A2Q9Y487 856 aa12.99□□□□□ -0.33
NSFL1C-210ENST00000553571 PSME4Q14997 1843 aa12.98□□□□□ -0.33
NSFL1C-210ENST00000553571 DDX10Q13206 875 aaKnown RBP12.98□□□□□ -0.33
NSFL1C-210ENST00000553571 COPS6Q7L5N1 327 aa12.98□□□□□ -0.33
NSFL1C-210ENST00000553571 TMC4Q7Z404 712 aa12.98□□□□□ -0.33
NSFL1C-210ENST00000553571 NLRP10Q86W26 655 aa12.98□□□□□ -0.33
NSFL1C-210ENST00000553571 SUPT20HQ8NEM7 779 aa12.98□□□□□ -0.33
NSFL1C-210ENST00000553571 RTFDC1Q9BY42 306 aaPredicted RBP12.98□□□□□ -0.33
NSFL1C-210ENST00000553571 TMX4Q9H1E5 349 aaPredicted RBP12.98□□□□□ -0.33
NSFL1C-210ENST00000553571 DUOX1Q9NRD9 1551 aa12.98□□□□□ -0.33
NSFL1C-210ENST00000553571 ABCC4O15439 1325 aa12.97□□□□□ -0.33
NSFL1C-210ENST00000553571 SH3TC1Q8TE82 1336 aa12.97□□□□□ -0.33
NSFL1C-210ENST00000553571 CDHR2Q9BYE9 1310 aa12.97□□□□□ -0.33
NSFL1C-210ENST00000553571 TMEM88BA6NKF7 163 aa12.97□□□□□ -0.33
NSFL1C-210ENST00000553571 BBOX1O75936 387 aa12.97□□□□□ -0.33
NSFL1C-210ENST00000553571 HSPA1AP0DMV8 641 aaKnown RBP12.97□□□□□ -0.33
NSFL1C-210ENST00000553571 HSPA1BP0DMV9 641 aaKnown RBP12.97□□□□□ -0.33
NSFL1C-210ENST00000553571 TCIRG1Q13488 830 aa12.97□□□□□ -0.33
NSFL1C-210ENST00000553571 C3orf67Q6ZVT6 689 aa12.97□□□□□ -0.33
NSFL1C-210ENST00000553571 LARGE2Q8N3Y3 721 aa12.97□□□□□ -0.33
NSFL1C-210ENST00000553571 XAGE3Q8WTP9 111 aa12.97□□□□□ -0.33
NSFL1C-210ENST00000553571 CFAP44Q96MT7 982 aa12.97□□□□□ -0.33
NSFL1C-210ENST00000553571 ANXA1P04083 346 aa12.96□□□□□ -0.33
NSFL1C-210ENST00000553571 LMOD1P29536 600 aaPredicted RBP12.96□□□□□ -0.33
NSFL1C-210ENST00000553571 EAPPQ56P03 285 aaPredicted RBP12.96□□□□□ -0.33
NSFL1C-210ENST00000553571 COL13A1Q5TAT6 717 aaPredicted RBP12.96□□□□□ -0.33
NSFL1C-210ENST00000553571 NIM1KQ8IY84 436 aa12.96□□□□□ -0.33
NSFL1C-210ENST00000553571 PLBD2Q8NHP8 589 aa12.96□□□□□ -0.33
NSFL1C-210ENST00000553571 DBF4Q9UBU7 674 aaPredicted RBP12.96□□□□□ -0.33
NSFL1C-210ENST00000553571 SCNN1DP51172 638 aa12.95□□□□□ -0.34
NSFL1C-210ENST00000553571 HDGFL1Q5TGJ6 251 aa12.95□□□□□ -0.34
NSFL1C-210ENST00000553571 SP8Q8IXZ3 490 aa12.95□□□□□ -0.34
NSFL1C-210ENST00000553571 CCDC146Q8IYE0 955 aa12.95□□□□□ -0.34
NSFL1C-210ENST00000553571 PRKRIP1Q9H875 184 aaPredicted RBP12.95□□□□□ -0.34
NSFL1C-210ENST00000553571 CHPF2Q9P2E5 772 aa12.95□□□□□ -0.34
NSFL1C-210ENST00000553571 ADAMTS8Q9UP79 889 aa12.95□□□□□ -0.34
NSFL1C-210ENST00000553571 POLR2AP24928 1970 aaKnown RBP12.94□□□□□ -0.34
NSFL1C-210ENST00000553571 PPIP5K2O43314 1243 aa12.94□□□□□ -0.34
NSFL1C-210ENST00000553571 CALD1Q05682 793 aaKnown RBP12.94□□□□□ -0.34
NSFL1C-210ENST00000553571 GRAPQ13588 217 aa12.94□□□□□ -0.34
NSFL1C-210ENST00000553571 NEUROD2Q15784 382 aa12.94□□□□□ -0.34
NSFL1C-210ENST00000553571 USP50Q70EL3 339 aaPredicted RBP12.94□□□□□ -0.34
NSFL1C-210ENST00000553571 DDX46Q7L014 1031 aaKnown RBP12.94□□□□□ -0.34
NSFL1C-210ENST00000553571 CNTROBQ8N137 903 aa12.94□□□□□ -0.34
NSFL1C-210ENST00000553571 GRAPLQ8TC17 118 aaPredicted RBP12.94□□□□□ -0.34
NSFL1C-210ENST00000553571 HYPKQ9NX55 129 aa12.94□□□□□ -0.34
NSFL1C-210ENST00000553571 MKRN1Q9UHC7 482 aaKnown RBP12.94□□□□□ -0.34
NSFL1C-210ENST00000553571 TRMT112Q9UI30 125 aaKnown RBP12.94□□□□□ -0.34
NSFL1C-210ENST00000553571 RASSF10A6NK89 507 aa12.93□□□□□ -0.34
NSFL1C-210ENST00000553571 ZNF853P0CG23 659 aa12.93□□□□□ -0.34
NSFL1C-210ENST00000553571 KIAA2012Q0VF49 1180 aa12.93□□□□□ -0.34
NSFL1C-210ENST00000553571 AIMP1Q12904 312 aaKnown RBP12.93□□□□□ -0.34
NSFL1C-210ENST00000553571 TRIM28Q13263 835 aaKnown RBP12.93□□□□□ -0.34
NSFL1C-210ENST00000553571 KRT24Q2M2I5 525 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms