RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 PCDHGC4Q9Y5F7 938 aa7.42□□□□□ -1.22
ATXN3-220ENST00000553491 TATP17735 454 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-220ENST00000553491 CTBSQ01459 385 aa7.41□□□□□ -1.22
ATXN3-220ENST00000553491 TNP2Q05952 138 aa7.41□□□□□ -1.22
ATXN3-220ENST00000553491 STAG2Q8N3U4 1231 aa7.41□□□□□ -1.22
ATXN3-220ENST00000553491 ADAMTS8Q9UP79 889 aa7.41□□□□□ -1.22
ATXN3-220ENST00000553491 ATAD2Q6PL18 1390 aa7.41□□□□□ -1.22
ATXN3-220ENST00000553491 PLB1Q6P1J6 1458 aa7.41□□□□□ -1.22
ATXN3-220ENST00000553491 ATXN7O15265 892 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-220ENST00000553491 GSK3AP49840 483 aa7.4□□□□□ -1.22
ATXN3-220ENST00000553491 ARSJQ5FYB0 599 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-220ENST00000553491 SAMD5Q5TGI4 173 aa7.4□□□□□ -1.22
ATXN3-220ENST00000553491 C1orf53Q5VUE5 145 aa7.4□□□□□ -1.22
ATXN3-220ENST00000553491 FIGNL1Q6PIW4 674 aa7.4□□□□□ -1.22
ATXN3-220ENST00000553491 SVOPQ8N4V2 548 aa7.4□□□□□ -1.22
ATXN3-220ENST00000553491 GAS2L2Q8NHY3 880 aa7.4□□□□□ -1.22
ATXN3-220ENST00000553491 C2orf49Q9BVC5 232 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-220ENST00000553491 TRAIPQ9BWF2 469 aa7.4□□□□□ -1.22
ATXN3-220ENST00000553491 PHF24Q9UPV7 400 aa7.4□□□□□ -1.22
ATXN3-220ENST00000553491 FHOD3Q2V2M9 1422 aa7.4□□□□□ -1.22
ATXN3-220ENST00000553491 RAPGEF6Q8TEU7 1601 aa7.39□□□□□ -1.23
ATXN3-220ENST00000553491 SAMD9Q5K651 1589 aa7.39□□□□□ -1.23
ATXN3-220ENST00000553491 EFSO43281 561 aa7.39□□□□□ -1.23
ATXN3-220ENST00000553491 LGR5O75473 907 aa7.39□□□□□ -1.23
ATXN3-220ENST00000553491 MAPTP10636 758 aaKnown RBP7.39□□□□□ -1.23
ATXN3-220ENST00000553491 FGFR3P22607 806 aa7.39□□□□□ -1.23
ATXN3-220ENST00000553491 TRIM26Q12899 539 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-220ENST00000553491 SCG3Q8WXD2 468 aaKnown RBP7.39□□□□□ -1.23
ATXN3-220ENST00000553491 ZNF232Q9UNY5 417 aa7.39□□□□□ -1.23
ATXN3-220ENST00000553491 RBM19Q9Y4C8 960 aaKnown RBP7.39□□□□□ -1.23
ATXN3-220ENST00000553491 GPC6Q9Y625 555 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-220ENST00000553491 ABCC2Q92887 1545 aa7.38□□□□□ -1.23
ATXN3-220ENST00000553491 PPP1R12BO60237 982 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-220ENST00000553491 FAM157BP0CG42 384 aa7.38□□□□□ -1.23
ATXN3-220ENST00000553491 MAP2K3P46734 347 aa7.38□□□□□ -1.23
ATXN3-220ENST00000553491 C1orf229Q6ZS94 237 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-220ENST00000553491 LRRC4BQ9NT99 713 aa7.38□□□□□ -1.23
ATXN3-220ENST00000553491 ZMIZ1Q9ULJ6 1067 aa7.38□□□□□ -1.23
ATXN3-220ENST00000553491 HCN4Q9Y3Q4 1203 aa7.38□□□□□ -1.23
ATXN3-220ENST00000553491 ASXL2Q76L83 1435 aa7.37□□□□□ -1.23
ATXN3-220ENST00000553491 ATG7O95352 703 aa7.37□□□□□ -1.23
ATXN3-220ENST00000553491 BCRP11274 1271 aa7.37□□□□□ -1.23
ATXN3-220ENST00000553491 IGFBP4P22692 258 aa7.37□□□□□ -1.23
ATXN3-220ENST00000553491 WEE1P30291 646 aa7.37□□□□□ -1.23
ATXN3-220ENST00000553491 ELOAQ14241 798 aaKnown RBP7.37□□□□□ -1.23
ATXN3-220ENST00000553491 FAM182BQ5T319 152 aa7.37□□□□□ -1.23
ATXN3-220ENST00000553491 BICDL1Q6ZP65 573 aa7.37□□□□□ -1.23
ATXN3-220ENST00000553491 HINFPQ9BQA5 517 aa7.37□□□□□ -1.23
ATXN3-220ENST00000553491 OXCT2Q9BYC2 517 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-220ENST00000553491 PHACTR1Q9C0D0 580 aa7.37□□□□□ -1.23
ATXN3-220ENST00000553491 STRN4Q9NRL3 753 aa7.37□□□□□ -1.23
ATXN3-220ENST00000553491 NSFL1CQ9UNZ2 370 aaKnown RBP7.37□□□□□ -1.23
ATXN3-220ENST00000553491 ABCA8O94911 1581 aa7.37□□□□□ -1.23
ATXN3-220ENST00000553491 DCDC2BA2VCK2 349 aa7.36□□□□□ -1.23
ATXN3-220ENST00000553491 PLEKHD1A6NEE1 506 aa7.36□□□□□ -1.23
ATXN3-220ENST00000553491 LRRC69Q6ZNQ3 347 aa7.36□□□□□ -1.23
ATXN3-220ENST00000553491 ALDH16A1Q8IZ83 802 aa7.36□□□□□ -1.23
ATXN3-220ENST00000553491 NOVA2Q9UNW9 492 aaKnown RBP7.36□□□□□ -1.23
ATXN3-220ENST00000553491 EFCAB5A4FU69 1503 aa7.36□□□□□ -1.23
ATXN3-220ENST00000553491 UHRF1BP1LA0JNW5 1464 aa7.36□□□□□ -1.23
ATXN3-220ENST00000553491 CARNS1A5YM72 827 aa7.35□□□□□ -1.23
ATXN3-220ENST00000553491 KHNYNO15037 678 aaKnown RBP7.35□□□□□ -1.23
ATXN3-220ENST00000553491 OIP5O43482 229 aa7.35□□□□□ -1.23
ATXN3-220ENST00000553491 ZNF280CQ8ND82 737 aa7.35□□□□□ -1.23
ATXN3-220ENST00000553491 FAM200AQ8TCP9 573 aa7.35□□□□□ -1.23
ATXN3-220ENST00000553491 RHPN1Q8TCX5 695 aa7.35□□□□□ -1.23
ATXN3-220ENST00000553491 KLF15Q9UIH9 416 aa7.35□□□□□ -1.23
ATXN3-220ENST00000553491 DIP2BQ9P265 1576 aa7.34□□□□□ -1.23
ATXN3-220ENST00000553491 MAPKBP1O60336 1514 aa7.34□□□□□ -1.23
ATXN3-220ENST00000553491 BMP4P12644 408 aa7.34□□□□□ -1.23
ATXN3-220ENST00000553491 CD33P20138 364 aa7.34□□□□□ -1.23
ATXN3-220ENST00000553491 KCNMA1Q12791 1236 aa7.34□□□□□ -1.23
ATXN3-220ENST00000553491 LAMC2Q13753 1193 aa7.34□□□□□ -1.23
ATXN3-220ENST00000553491 CHMP3Q9Y3E7 222 aa7.34□□□□□ -1.23
ATXN3-220ENST00000553491 LRRIQ1Q96JM4 1722 aa7.34□□□□□ -1.23
ATXN3-220ENST00000553491 ABCC10Q5T3U5 1492 aa7.34□□□□□ -1.23
ATXN3-220ENST00000553491 ARHGAP35Q9NRY4 1499 aa7.34□□□□□ -1.23
ATXN3-220ENST00000553491 CLIP1P30622 1438 aa7.34□□□□□ -1.23
ATXN3-220ENST00000553491 KDM5BQ9UGL1 1544 aa7.33□□□□□ -1.24
ATXN3-220ENST00000553491 ATP10BO94823 1461 aa7.33□□□□□ -1.24
ATXN3-220ENST00000553491 SHISA8B8ZZ34 492 aa7.33□□□□□ -1.24
ATXN3-220ENST00000553491 GRIN2CQ14957 1233 aa7.33□□□□□ -1.24
ATXN3-220ENST00000553491 HSH2DQ96JZ2 352 aa7.33□□□□□ -1.24
ATXN3-220ENST00000553491 SUSD3Q96L08 255 aa7.33□□□□□ -1.24
ATXN3-220ENST00000553491 USTQ9Y2C2 406 aa7.33□□□□□ -1.24
ATXN3-220ENST00000553491 GJA3Q9Y6H8 435 aa7.33□□□□□ -1.24
ATXN3-220ENST00000553491 TMEM88BA6NKF7 163 aa7.32□□□□□ -1.24
ATXN3-220ENST00000553491 ARAFP10398 606 aa7.32□□□□□ -1.24
ATXN3-220ENST00000553491 HOXB4P17483 251 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-220ENST00000553491 MAP3K10Q02779 954 aa7.32□□□□□ -1.24
ATXN3-220ENST00000553491 PDE4CQ08493 712 aa7.32□□□□□ -1.24
ATXN3-220ENST00000553491 STK32AQ8WU08 396 aa7.32□□□□□ -1.24
ATXN3-220ENST00000553491 MARK1Q9P0L2 795 aa7.32□□□□□ -1.24
ATXN3-220ENST00000553491 GGA1Q9UJY5 639 aa7.32□□□□□ -1.24
ATXN3-220ENST00000553491 GDF2Q9UK05 429 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-220ENST00000553491 CDK11AQ9UQ88 783 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-220ENST00000553491 BCS1LQ9Y276 419 aa7.32□□□□□ -1.24
ATXN3-220ENST00000553491 FMN1Q68DA7 1419 aa7.32□□□□□ -1.24
ATXN3-220ENST00000553491 FOXO3O43524 673 aa7.31□□□□□ -1.24
ATXN3-220ENST00000553491 KCNQ4P56696 695 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms