RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 ST20-MTHFSA0A0A6YYL1 179 aa10.24□□□□□ -0.77
ATXN3-219ENST00000553488 HSP90AB2PQ58FF8 381 aa10.24□□□□□ -0.77
ATXN3-219ENST00000553488 SMIM5Q71RC9 77 aa10.24□□□□□ -0.77
ATXN3-219ENST00000553488 SLF2Q8IX21 1173 aa10.24□□□□□ -0.77
ATXN3-219ENST00000553488 ZNF526Q8TF50 670 aaPredicted RBP10.24□□□□□ -0.77
ATXN3-219ENST00000553488 GGNBP2Q9H3C7 697 aa10.24□□□□□ -0.77
ATXN3-219ENST00000553488 MYH14Q7Z406 1995 aaKnown RBP10.24□□□□□ -0.77
ATXN3-219ENST00000553488 SSFA2P28290 1259 aa10.23□□□□□ -0.77
ATXN3-219ENST00000553488 MAP2K5Q13163 448 aa10.23□□□□□ -0.77
ATXN3-219ENST00000553488 MPRIPQ6WCQ1 1025 aa10.23□□□□□ -0.77
ATXN3-219ENST00000553488 LINC00116Q8NCU8 138 aa10.23□□□□□ -0.77
ATXN3-219ENST00000553488 AK7Q96M32 723 aa10.23□□□□□ -0.77
ATXN3-219ENST00000553488 WWC3Q9ULE0 1092 aa10.23□□□□□ -0.77
ATXN3-219ENST00000553488 KDRP35968 1356 aa10.23□□□□□ -0.77
ATXN3-219ENST00000553488 TONSLQ96HA7 1378 aa10.23□□□□□ -0.77
ATXN3-219ENST00000553488 C10orf71Q711Q0 1435 aa10.23□□□□□ -0.77
ATXN3-219ENST00000553488 HMGB2P26583 209 aaKnown RBP10.22□□□□□ -0.77
ATXN3-219ENST00000553488 PIGBQ92521 554 aa10.22□□□□□ -0.77
ATXN3-219ENST00000553488 SMARCC1Q92922 1105 aaPredicted RBP10.22□□□□□ -0.77
ATXN3-219ENST00000553488 IRF6O14896 467 aa10.21□□□□□ -0.77
ATXN3-219ENST00000553488 SBF1O95248 1867 aa10.21□□□□□ -0.78
ATXN3-219ENST00000553488 LOC102724428A0A0B4J2F2 783 aa10.2□□□□□ -0.78
ATXN3-219ENST00000553488 ZMYND10O75800 440 aa10.2□□□□□ -0.78
ATXN3-219ENST00000553488 APLP1P51693 650 aa10.2□□□□□ -0.78
ATXN3-219ENST00000553488 SIK1P57059 783 aa10.2□□□□□ -0.78
ATXN3-219ENST00000553488 ITPK1Q13572 414 aa10.2□□□□□ -0.78
ATXN3-219ENST00000553488 EMILIN1Q9Y6C2 1016 aa10.2□□□□□ -0.78
ATXN3-219ENST00000553488 ADAMTS7Q9UKP4 1686 aa10.19□□□□□ -0.78
ATXN3-219ENST00000553488 SLC10A3P09131 477 aa10.19□□□□□ -0.78
ATXN3-219ENST00000553488 ZC3H15Q8WU90 426 aaKnown RBP10.19□□□□□ -0.78
ATXN3-219ENST00000553488 NECTIN2Q92692 538 aa10.19□□□□□ -0.78
ATXN3-219ENST00000553488 TJP1Q07157 1748 aa10.19□□□□□ -0.78
ATXN3-219ENST00000553488 TNRC6CQ9HCJ0 1690 aaKnown RBP10.18□□□□□ -0.78
ATXN3-219ENST00000553488 PLEKHG2Q9H7P9 1386 aa10.18□□□□□ -0.78
ATXN3-219ENST00000553488 TJAP1Q5JTD0 557 aa10.18□□□□□ -0.78
ATXN3-219ENST00000553488 ASAP1Q9ULH1 1129 aa10.18□□□□□ -0.78
ATXN3-219ENST00000553488 MMP10P09238 476 aa10.17□□□□□ -0.78
ATXN3-219ENST00000553488 DNAJC5GQ8N7S2 189 aa10.17□□□□□ -0.78
ATXN3-219ENST00000553488 DAXXQ9UER7 740 aaPredicted RBP10.17□□□□□ -0.78
ATXN3-219ENST00000553488 VIRMAQ69YN4 1812 aaKnown RBP10.17□□□□□ -0.78
ATXN3-219ENST00000553488 DLEC1Q9Y238 1755 aa10.16□□□□□ -0.78
ATXN3-219ENST00000553488 RNF40O75150 1001 aa10.16□□□□□ -0.78
ATXN3-219ENST00000553488 PHKG2P15735 406 aa10.16□□□□□ -0.78
ATXN3-219ENST00000553488 TMF1P82094 1093 aa10.16□□□□□ -0.78
ATXN3-219ENST00000553488 SLC4A9Q96Q91 983 aa10.16□□□□□ -0.78
ATXN3-219ENST00000553488 CARD14Q9BXL6 1004 aa10.16□□□□□ -0.78
ATXN3-219ENST00000553488 ATG3Q9NT62 314 aa10.16□□□□□ -0.78
ATXN3-219ENST00000553488 TMOD3Q9NYL9 352 aa10.16□□□□□ -0.78
ATXN3-219ENST00000553488 WASHC2AQ641Q2 1341 aa10.15□□□□□ -0.78
ATXN3-219ENST00000553488 TOMM70O94826 608 aa10.15□□□□□ -0.78
ATXN3-219ENST00000553488 ATP6V1AP38606 617 aa10.15□□□□□ -0.78
ATXN3-219ENST00000553488 NLRP7Q8WX94 980 aa10.15□□□□□ -0.78
ATXN3-219ENST00000553488 CCDC102AQ96A19 550 aa10.15□□□□□ -0.78
ATXN3-219ENST00000553488 NMRK2Q9NPI5 230 aa10.15□□□□□ -0.78
ATXN3-219ENST00000553488 SPG7Q9UQ90 795 aa10.15□□□□□ -0.78
ATXN3-219ENST00000553488 KDM6AO15550 1401 aaPredicted RBP10.15□□□□□ -0.79
ATXN3-219ENST00000553488 AFDNP55196 1824 aaKnown RBP10.14□□□□□ -0.79
ATXN3-219ENST00000553488 SCN11AQ9UI33 1791 aa10.14□□□□□ -0.79
ATXN3-219ENST00000553488 TGFB2P61812 414 aa10.14□□□□□ -0.79
ATXN3-219ENST00000553488 BCS1LQ9Y276 419 aa10.14□□□□□ -0.79
ATXN3-219ENST00000553488 TIAM2Q8IVF5 1701 aa10.13□□□□□ -0.79
ATXN3-219ENST00000553488 NRXN2Q9P2S2 1712 aa10.13□□□□□ -0.79
ATXN3-219ENST00000553488 KCPQ6ZWJ8 1503 aa10.13□□□□□ -0.79
ATXN3-219ENST00000553488 CNTNAP4Q9C0A0 1308 aa10.13□□□□□ -0.79
ATXN3-219ENST00000553488 A0A0G2JLW4 131 aa10.13□□□□□ -0.79
ATXN3-219ENST00000553488 GYS1P13807 737 aa10.13□□□□□ -0.79
ATXN3-219ENST00000553488 DPEP1P16444 411 aa10.13□□□□□ -0.79
ATXN3-219ENST00000553488 SLC4A3P48751 1232 aa10.13□□□□□ -0.79
ATXN3-219ENST00000553488 IFNL2Q8IZJ0 200 aa10.13□□□□□ -0.79
ATXN3-219ENST00000553488 CCDC88AQ3V6T2 1871 aa10.13□□□□□ -0.79
ATXN3-219ENST00000553488 KCNA3P22001 575 aa10.12□□□□□ -0.79
ATXN3-219ENST00000553488 KCNC4Q03721 635 aa10.12□□□□□ -0.79
ATXN3-219ENST00000553488 MTRQ99707 1265 aa10.12□□□□□ -0.79
ATXN3-219ENST00000553488 TMUB1Q9BVT8 246 aa10.12□□□□□ -0.79
ATXN3-219ENST00000553488 ACTN4O43707 911 aaKnown RBP10.11□□□□□ -0.79
ATXN3-219ENST00000553488 RC3H1Q5TC82 1133 aaKnown RBP10.11□□□□□ -0.79
ATXN3-219ENST00000553488 NLGN1Q8N2Q7 840 aa10.11□□□□□ -0.79
ATXN3-219ENST00000553488 JMYQ8N9B5 988 aa10.11□□□□□ -0.79
ATXN3-219ENST00000553488 CCDC87Q9NVE4 849 aa10.11□□□□□ -0.79
ATXN3-219ENST00000553488 POLKQ9UBT6 870 aa10.11□□□□□ -0.79
ATXN3-219ENST00000553488 RTCBQ9Y3I0 505 aaKnown RBP10.11□□□□□ -0.79
ATXN3-219ENST00000553488 PPM1GO15355 546 aaPredicted RBP10.1□□□□□ -0.79
ATXN3-219ENST00000553488 HTRA3P83110 453 aa10.1□□□□□ -0.79
ATXN3-219ENST00000553488 EIF4A2Q14240 407 aaKnown RBP10.1□□□□□ -0.79
ATXN3-219ENST00000553488 CDCA8Q53HL2 280 aa10.1□□□□□ -0.79
ATXN3-219ENST00000553488 TRAPPC3LQ5T215 181 aa10.1□□□□□ -0.79
ATXN3-219ENST00000553488 C9orf131Q5VYM1 1079 aa10.1□□□□□ -0.79
ATXN3-219ENST00000553488 ARHGAP27Q6ZUM4 889 aa10.1□□□□□ -0.79
ATXN3-219ENST00000553488 KLRG1Q96E93 195 aa10.1□□□□□ -0.79
ATXN3-219ENST00000553488 DCAF5Q96JK2 942 aa10.1□□□□□ -0.79
ATXN3-219ENST00000553488 PRR14Q9BWN1 585 aa10.1□□□□□ -0.79
ATXN3-219ENST00000553488 IL21Q9HBE4 155 aa10.1□□□□□ -0.79
ATXN3-219ENST00000553488 ERVV-2B6SEH9 535 aa10.09□□□□□ -0.79
ATXN3-219ENST00000553488 RPS6KA4O75676 772 aa10.09□□□□□ -0.79
ATXN3-219ENST00000553488 CFHP08603 1231 aa10.09□□□□□ -0.79
ATXN3-219ENST00000553488 DDR1Q08345 913 aa10.09□□□□□ -0.79
ATXN3-219ENST00000553488 DICER1Q9UPY3 1922 aaKnown RBP10.09□□□□□ -0.79
ATXN3-219ENST00000553488 UBR2Q8IWV8 1755 aa10.09□□□□□ -0.79
ATXN3-219ENST00000553488 USP42Q9H9J4 1324 aaKnown RBP10.08□□□□□ -0.8
ATXN3-219ENST00000553488 COL13A1Q5TAT6 717 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms