RNA–Protein interactions for RNA: ENST00000553040.5

LMBR1L-229, Transcript of limb development membrane protein 1 like, humanhuman

TSL 5

Gene LMBR1L, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1L-229ENST00000553040 C1QTNF8P60827 252 aa13.93□□□□□ -0.18
LMBR1L-229ENST00000553040 HSP90AB3PQ58FF7 597 aa13.93□□□□□ -0.18
LMBR1L-229ENST00000553040 NLRP10Q86W26 655 aa13.93□□□□□ -0.18
LMBR1L-229ENST00000553040 C7orf43Q8WVR3 580 aa13.93□□□□□ -0.18
LMBR1L-229ENST00000553040 ZNF428Q96B54 188 aa13.93□□□□□ -0.18
LMBR1L-229ENST00000553040 UTP14AQ9BVJ6 771 aaKnown RBP13.93□□□□□ -0.18
LMBR1L-229ENST00000553040 LMNB1P20700 586 aa13.92□□□□□ -0.18
LMBR1L-229ENST00000553040 CRY2Q49AN0 593 aa13.92□□□□□ -0.18
LMBR1L-229ENST00000553040 C3orf67Q6ZVT6 689 aa13.92□□□□□ -0.18
LMBR1L-229ENST00000553040 WDR63Q8IWG1 891 aa13.92□□□□□ -0.18
LMBR1L-229ENST00000553040 SYNE4Q8N205 404 aa13.92□□□□□ -0.18
LMBR1L-229ENST00000553040 RIC1Q4ADV7 1423 aa13.91□□□□□ -0.18
LMBR1L-229ENST00000553040 ATP5J2-PTCD1G3V325 749 aa13.91□□□□□ -0.18
LMBR1L-229ENST00000553040 TCERG1O14776 1098 aaKnown RBP13.91□□□□□ -0.18
LMBR1L-229ENST00000553040 ALDH1B1P30837 517 aa13.91□□□□□ -0.18
LMBR1L-229ENST00000553040 SLC10A5Q5PT55 438 aa13.91□□□□□ -0.18
LMBR1L-229ENST00000553040 CCDC30Q5VVM6 783 aa13.91□□□□□ -0.18
LMBR1L-229ENST00000553040 OLFM4Q6UX06 510 aa13.91□□□□□ -0.18
LMBR1L-229ENST00000553040 ISCA1Q9BUE6 129 aa13.91□□□□□ -0.18
LMBR1L-229ENST00000553040 SPINK5Q9NQ38 1064 aaPredicted RBP13.91□□□□□ -0.18
LMBR1L-229ENST00000553040 TRMT112Q9UI30 125 aaKnown RBP13.91□□□□□ -0.18
LMBR1L-229ENST00000553040 FANCIQ9NVI1 1328 aa13.9□□□□□ -0.18
LMBR1L-229ENST00000553040 HCLS1P14317 486 aaPredicted RBP13.9□□□□□ -0.18
LMBR1L-229ENST00000553040 TWISTNBQ3B726 338 aaPredicted RBP13.9□□□□□ -0.18
LMBR1L-229ENST00000553040 LAMB2P55268 1798 aa13.89□□□□□ -0.19
LMBR1L-229ENST00000553040 HOXA10P31260 410 aaPredicted RBP13.89□□□□□ -0.19
LMBR1L-229ENST00000553040 RIC3Q7Z5B4 369 aa13.89□□□□□ -0.19
LMBR1L-229ENST00000553040 RPGRQ92834 1020 aaKnown RBP13.89□□□□□ -0.19
LMBR1L-229ENST00000553040 NLRP3Q96P20 1036 aa13.89□□□□□ -0.19
LMBR1L-229ENST00000553040 CHMP4AQ9BY43 222 aa13.89□□□□□ -0.19
LMBR1L-229ENST00000553040 DICER1Q9UPY3 1922 aaKnown RBP13.89□□□□□ -0.19
LMBR1L-229ENST00000553040 RNF123Q5XPI4 1314 aa13.89□□□□□ -0.19
LMBR1L-229ENST00000553040 KIF3CO14782 793 aa13.88□□□□□ -0.19
LMBR1L-229ENST00000553040 EXOSC9Q06265 439 aaKnown RBP13.88□□□□□ -0.19
LMBR1L-229ENST00000553040 GOLGA2Q08379 1002 aa13.88□□□□□ -0.19
LMBR1L-229ENST00000553040 CCDC93Q567U6 631 aa13.88□□□□□ -0.19
LMBR1L-229ENST00000553040 SOGA3Q5TF21 947 aa13.88□□□□□ -0.19
LMBR1L-229ENST00000553040 RBM17Q96I25 401 aaKnown RBP13.88□□□□□ -0.19
LMBR1L-229ENST00000553040 TAOK3Q9H2K8 898 aa13.88□□□□□ -0.19
LMBR1L-229ENST00000553040 NMRK2Q9NPI5 230 aa13.88□□□□□ -0.19
LMBR1L-229ENST00000553040 LTBP3Q9NS15 1303 aa13.88□□□□□ -0.19
LMBR1L-229ENST00000553040 TIAM2Q8IVF5 1701 aa13.87□□□□□ -0.19
LMBR1L-229ENST00000553040 TRIM28Q13263 835 aaKnown RBP13.87□□□□□ -0.19
LMBR1L-229ENST00000553040 G2E3Q7L622 706 aa13.87□□□□□ -0.19
LMBR1L-229ENST00000553040 SLC51AQ86UW1 340 aa13.87□□□□□ -0.19
LMBR1L-229ENST00000553040 FAM89AQ96GI7 184 aa13.87□□□□□ -0.19
LMBR1L-229ENST00000553040 CRAMP1Q96RY5 1269 aa13.87□□□□□ -0.19
LMBR1L-229ENST00000553040 MYD88Q99836 296 aa13.87□□□□□ -0.19
LMBR1L-229ENST00000553040 STK31Q9BXU1 1019 aa13.87□□□□□ -0.19
LMBR1L-229ENST00000553040 SH3TC1Q8TE82 1336 aa13.87□□□□□ -0.19
LMBR1L-229ENST00000553040 DDX60Q8IY21 1712 aaKnown RBP13.87□□□□□ -0.19
LMBR1L-229ENST00000553040 TAF1P21675 1872 aa13.87□□□□□ -0.19
LMBR1L-229ENST00000553040 VAMP4O75379 141 aa13.86□□□□□ -0.19
LMBR1L-229ENST00000553040 SLC4A2P04920 1241 aa13.86□□□□□ -0.19
LMBR1L-229ENST00000553040 RTL5Q5HYW3 569 aaPredicted RBP13.86□□□□□ -0.19
LMBR1L-229ENST00000553040 ZNF521Q96K83 1311 aa13.86□□□□□ -0.19
LMBR1L-229ENST00000553040 ZC3H4Q9UPT8 1303 aaKnown RBP13.86□□□□□ -0.19
LMBR1L-229ENST00000553040 DDX58O95786 925 aaKnown RBP13.85□□□□□ -0.19
LMBR1L-229ENST00000553040 FKBP4Q02790 459 aaKnown RBP eCLIP13.85□□□□□ -0.19
LMBR1L-229ENST00000553040 RTKN2Q8IZC4 609 aa13.85□□□□□ -0.19
LMBR1L-229ENST00000553040 MAP3K2Q9Y2U5 619 aa13.85□□□□□ -0.19
LMBR1L-229ENST00000553040 ABCC4O15439 1325 aa13.85□□□□□ -0.19
LMBR1L-229ENST00000553040 KDM2BQ8NHM5 1336 aa13.85□□□□□ -0.19
LMBR1L-229ENST00000553040 SNED1Q8TER0 1413 aa13.84□□□□□ -0.19
LMBR1L-229ENST00000553040 CACNA1FO60840 1977 aa13.84□□□□□ -0.19
LMBR1L-229ENST00000553040 PI4KAP2A4QPH2 592 aa13.84□□□□□ -0.19
LMBR1L-229ENST00000553040 GLTPD2A6NH11 291 aa13.84□□□□□ -0.19
LMBR1L-229ENST00000553040 CCER2I3L3R5 266 aa13.84□□□□□ -0.19
LMBR1L-229ENST00000553040 PPEF1O14829 653 aaPredicted RBP13.84□□□□□ -0.19
LMBR1L-229ENST00000553040 KSR2Q6VAB6 950 aa13.84□□□□□ -0.19
LMBR1L-229ENST00000553040 PI4KAP1Q8N8J0 262 aa13.84□□□□□ -0.19
LMBR1L-229ENST00000553040 METTL22Q9BUU2 404 aaPredicted RBP13.84□□□□□ -0.19
LMBR1L-229ENST00000553040 RRAGCQ9HB90 399 aa13.84□□□□□ -0.19
LMBR1L-229ENST00000553040 ZNF277Q9NRM2 450 aaPredicted RBP13.84□□□□□ -0.19
LMBR1L-229ENST00000553040 CEP350Q5VT06 3117 aa13.84□□□□□ -0.19
LMBR1L-229ENST00000553040 CCDC191Q8NCU4 936 aa13.83□□□□□ -0.2
LMBR1L-229ENST00000553040 JARID2Q92833 1246 aaPredicted RBP13.83□□□□□ -0.2
LMBR1L-229ENST00000553040 MYH16Q9H6N6 1097 aa13.83□□□□□ -0.2
LMBR1L-229ENST00000553040 IRS4O14654 1257 aaPredicted RBP13.82□□□□□ -0.2
LMBR1L-229ENST00000553040 IGKV5-2P06315 115 aa13.82□□□□□ -0.2
LMBR1L-229ENST00000553040 CC2D2BQ6DHV5 1058 aa13.82□□□□□ -0.2
LMBR1L-229ENST00000553040 DDX46Q7L014 1031 aaKnown RBP13.82□□□□□ -0.2
LMBR1L-229ENST00000553040 ZBTB38Q8NAP3 1195 aaPredicted RBP13.82□□□□□ -0.2
LMBR1L-229ENST00000553040 CWC25Q9NXE8 425 aaPredicted RBP13.82□□□□□ -0.2
LMBR1L-229ENST00000553040 PCCAP05165 728 aaPredicted RBP13.81□□□□□ -0.2
LMBR1L-229ENST00000553040 FLIIQ13045 1269 aa13.81□□□□□ -0.2
LMBR1L-229ENST00000553040 SF3B3Q15393 1217 aaKnown RBP13.81□□□□□ -0.2
LMBR1L-229ENST00000553040 PSMD1Q99460 953 aa13.81□□□□□ -0.2
LMBR1L-229ENST00000553040 ATP6V0A2Q9Y487 856 aa13.81□□□□□ -0.2
LMBR1L-229ENST00000553040 COL4A1P02462 1669 aa13.8□□□□□ -0.2
LMBR1L-229ENST00000553040 BBOX1O75936 387 aa13.8□□□□□ -0.2
LMBR1L-229ENST00000553040 TOMM70O94826 608 aa13.8□□□□□ -0.2
LMBR1L-229ENST00000553040 IARSP41252 1262 aaKnown RBP13.8□□□□□ -0.2
LMBR1L-229ENST00000553040 GRAPQ13588 217 aa13.8□□□□□ -0.2
LMBR1L-229ENST00000553040 CWF19L2Q2TBE0 894 aaKnown RBP13.8□□□□□ -0.2
LMBR1L-229ENST00000553040 DPY19L2Q6NUT2 758 aa13.8□□□□□ -0.2
LMBR1L-229ENST00000553040 GRAPLQ8TC17 118 aaPredicted RBP13.8□□□□□ -0.2
LMBR1L-229ENST00000553040 POTECB2RU33 542 aa13.79□□□□□ -0.2
LMBR1L-229ENST00000553040 DDNO94850 711 aaPredicted RBP13.79□□□□□ -0.2
LMBR1L-229ENST00000553040 FKBP5Q13451 457 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms