RNA–Protein interactions for RNA: ENST00000552566.1

SMARCC2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-212ENST00000552566 PPP1R42Q7Z4L9 355 aa18.02■□□□□ 0.48
SMARCC2-212ENST00000552566 ZNF541Q9H0D2 1346 aa18.01■□□□□ 0.47
SMARCC2-212ENST00000552566 IQCA1LA6NCM1 817 aa18.01■□□□□ 0.47
SMARCC2-212ENST00000552566 NTSR2O95665 410 aa18.01■□□□□ 0.47
SMARCC2-212ENST00000552566 IARSP41252 1262 aaKnown RBP18.01■□□□□ 0.47
SMARCC2-212ENST00000552566 NCBP3Q53F19 620 aaKnown RBP18.01■□□□□ 0.47
SMARCC2-212ENST00000552566 RBM17Q96I25 401 aaKnown RBP18.01■□□□□ 0.47
SMARCC2-212ENST00000552566 KRT24Q2M2I5 525 aa18■□□□□ 0.47
SMARCC2-212ENST00000552566 PARP10Q53GL7 1025 aa18■□□□□ 0.47
SMARCC2-212ENST00000552566 C3orf67Q6ZVT6 689 aa18■□□□□ 0.47
SMARCC2-212ENST00000552566 COPS6Q7L5N1 327 aa18■□□□□ 0.47
SMARCC2-212ENST00000552566 LRP10Q7Z4F1 713 aa18■□□□□ 0.47
SMARCC2-212ENST00000552566 XAGE3Q8WTP9 111 aa18■□□□□ 0.47
SMARCC2-212ENST00000552566 UTP14AQ9BVJ6 771 aaKnown RBP18■□□□□ 0.47
SMARCC2-212ENST00000552566 SBF1O95248 1867 aa18■□□□□ 0.47
SMARCC2-212ENST00000552566 EAPPQ56P03 285 aaPredicted RBP17.99■□□□□ 0.47
SMARCC2-212ENST00000552566 JMYQ8N9B5 988 aa17.99■□□□□ 0.47
SMARCC2-212ENST00000552566 JDP2Q8WYK2 163 aa17.99■□□□□ 0.47
SMARCC2-212ENST00000552566 NLRP3Q96P20 1036 aa17.99■□□□□ 0.47
SMARCC2-212ENST00000552566 SLX4Q8IY92 1834 aa17.99■□□□□ 0.47
SMARCC2-212ENST00000552566 TIAM2Q8IVF5 1701 aa17.98■□□□□ 0.47
SMARCC2-212ENST00000552566 CHL1O00533 1208 aa17.98■□□□□ 0.47
SMARCC2-212ENST00000552566 PPEF1O14829 653 aaPredicted RBP17.98■□□□□ 0.47
SMARCC2-212ENST00000552566 HOXA10P31260 410 aaPredicted RBP17.98■□□□□ 0.47
SMARCC2-212ENST00000552566 CALD1Q05682 793 aaKnown RBP17.98■□□□□ 0.47
SMARCC2-212ENST00000552566 CC2D2BQ6DHV5 1058 aa17.98■□□□□ 0.47
SMARCC2-212ENST00000552566 L3MBTL3Q96JM7 780 aaPredicted RBP17.98■□□□□ 0.47
SMARCC2-212ENST00000552566 TAF1DQ9H5J8 278 aaPredicted RBP17.98■□□□□ 0.47
SMARCC2-212ENST00000552566 TRIM35Q9UPQ4 493 aa17.98■□□□□ 0.47
SMARCC2-212ENST00000552566 IBTKQ9P2D0 1353 aaPredicted RBP17.98■□□□□ 0.47
SMARCC2-212ENST00000552566 KDM3BQ7LBC6 1761 aa17.97■□□□□ 0.47
SMARCC2-212ENST00000552566 CCDC27Q2M243 656 aa17.97■□□□□ 0.47
SMARCC2-212ENST00000552566 SLC51AQ86UW1 340 aa17.97■□□□□ 0.47
SMARCC2-212ENST00000552566 ZNF428Q96B54 188 aa17.97■□□□□ 0.47
SMARCC2-212ENST00000552566 CRAMP1Q96RY5 1269 aa17.97■□□□□ 0.47
SMARCC2-212ENST00000552566 PSMD1Q99460 953 aa17.97■□□□□ 0.47
SMARCC2-212ENST00000552566 TMX4Q9H1E5 349 aaPredicted RBP17.97■□□□□ 0.47
SMARCC2-212ENST00000552566 HACL1Q9UJ83 578 aa17.97■□□□□ 0.47
SMARCC2-212ENST00000552566 CLEC11AQ9Y240 323 aa17.97■□□□□ 0.47
SMARCC2-212ENST00000552566 ZBED9Q6R2W3 1325 aa17.97■□□□□ 0.47
SMARCC2-212ENST00000552566 HSP90AB3PQ58FF7 597 aa17.96■□□□□ 0.47
SMARCC2-212ENST00000552566 LDHDQ86WU2 507 aa17.96■□□□□ 0.47
SMARCC2-212ENST00000552566 DDX21Q9NR30 783 aaKnown RBP eCLIP17.96■□□□□ 0.47
SMARCC2-212ENST00000552566 GJA3Q9Y6H8 435 aa17.96■□□□□ 0.47
SMARCC2-212ENST00000552566 LAMB4A4D0S4 1761 aa17.96■□□□□ 0.47
SMARCC2-212ENST00000552566 WDR90Q96KV7 1748 aa17.95■□□□□ 0.46
SMARCC2-212ENST00000552566 FZD9O00144 591 aa17.95■□□□□ 0.46
SMARCC2-212ENST00000552566 HCLS1P14317 486 aaPredicted RBP17.95■□□□□ 0.46
SMARCC2-212ENST00000552566 EIF6P56537 245 aaKnown RBP17.95■□□□□ 0.46
SMARCC2-212ENST00000552566 HDGFL1Q5TGJ6 251 aa17.95■□□□□ 0.46
SMARCC2-212ENST00000552566 LARGE2Q8N3Y3 721 aa17.95■□□□□ 0.46
SMARCC2-212ENST00000552566 CHPF2Q9P2E5 772 aa17.95■□□□□ 0.46
SMARCC2-212ENST00000552566 TRMT112Q9UI30 125 aaKnown RBP17.95■□□□□ 0.46
SMARCC2-212ENST00000552566 RNF123Q5XPI4 1314 aa17.95■□□□□ 0.46
SMARCC2-212ENST00000552566 EPHX2P34913 555 aa17.94■□□□□ 0.46
SMARCC2-212ENST00000552566 NLRP10Q86W26 655 aa17.94■□□□□ 0.46
SMARCC2-212ENST00000552566 RIC1Q4ADV7 1423 aa17.94■□□□□ 0.46
SMARCC2-212ENST00000552566 FER1L6Q2WGJ9 1857 aa17.93■□□□□ 0.46
SMARCC2-212ENST00000552566 TCIRG1Q13488 830 aa17.93■□□□□ 0.46
SMARCC2-212ENST00000552566 GRIPAP1Q4V328 841 aa17.93■□□□□ 0.46
SMARCC2-212ENST00000552566 SLC10A5Q5PT55 438 aa17.93■□□□□ 0.46
SMARCC2-212ENST00000552566 WDR63Q8IWG1 891 aa17.93■□□□□ 0.46
SMARCC2-212ENST00000552566 WWC1Q8IX03 1113 aa17.93■□□□□ 0.46
SMARCC2-212ENST00000552566 GPC2Q8N158 579 aa17.93■□□□□ 0.46
SMARCC2-212ENST00000552566 MKRN1Q9UHC7 482 aaKnown RBP17.93■□□□□ 0.46
SMARCC2-212ENST00000552566 GOLGA2Q08379 1002 aa17.92■□□□□ 0.46
SMARCC2-212ENST00000552566 CREBZFQ9NS37 354 aa17.92■□□□□ 0.46
SMARCC2-212ENST00000552566 PPIP5K2O43314 1243 aa17.91■□□□□ 0.46
SMARCC2-212ENST00000552566 DUSP27Q5VZP5 1158 aa17.91■□□□□ 0.46
SMARCC2-212ENST00000552566 PNMA8AQ86V59 439 aaPredicted RBP17.91■□□□□ 0.46
SMARCC2-212ENST00000552566 NIM1KQ8IY84 436 aa17.91■□□□□ 0.46
SMARCC2-212ENST00000552566 CFAP44Q96MT7 982 aa17.91■□□□□ 0.46
SMARCC2-212ENST00000552566 DBF4Q9UBU7 674 aaPredicted RBP17.91■□□□□ 0.46
SMARCC2-212ENST00000552566 ATP6V0A2Q9Y487 856 aa17.91■□□□□ 0.46
SMARCC2-212ENST00000552566 DLG5Q8TDM6 1919 aa17.91■□□□□ 0.46
SMARCC2-212ENST00000552566 ABCC4O15439 1325 aa17.91■□□□□ 0.46
SMARCC2-212ENST00000552566 SNED1Q8TER0 1413 aa17.9■□□□□ 0.46
SMARCC2-212ENST00000552566 LMOD1P29536 600 aaPredicted RBP17.9■□□□□ 0.46
SMARCC2-212ENST00000552566 AOC3Q16853 763 aa17.9■□□□□ 0.46
SMARCC2-212ENST00000552566 COL13A1Q5TAT6 717 aaPredicted RBP17.9■□□□□ 0.46
SMARCC2-212ENST00000552566 MAP1SQ66K74 1059 aaPredicted RBP17.9■□□□□ 0.46
SMARCC2-212ENST00000552566 ANKRD13DQ6ZTN6 518 aa17.9■□□□□ 0.46
SMARCC2-212ENST00000552566 MBIPQ9NS73 344 aa17.9■□□□□ 0.46
SMARCC2-212ENST00000552566 SH3TC1Q8TE82 1336 aa17.9■□□□□ 0.46
SMARCC2-212ENST00000552566 ATP5J2-PTCD1G3V325 749 aa17.89■□□□□ 0.45
SMARCC2-212ENST00000552566 HOXB7P09629 217 aa17.89■□□□□ 0.45
SMARCC2-212ENST00000552566 HSPA1AP0DMV8 641 aaKnown RBP17.89■□□□□ 0.45
SMARCC2-212ENST00000552566 HSPA1BP0DMV9 641 aaKnown RBP17.89■□□□□ 0.45
SMARCC2-212ENST00000552566 DDX46Q7L014 1031 aaKnown RBP17.89■□□□□ 0.45
SMARCC2-212ENST00000552566 PLBD2Q8NHP8 589 aa17.89■□□□□ 0.45
SMARCC2-212ENST00000552566 ELL2O00472 640 aaPredicted RBP17.88■□□□□ 0.45
SMARCC2-212ENST00000552566 BBOX1O75936 387 aa17.88■□□□□ 0.45
SMARCC2-212ENST00000552566 CENPBP07199 599 aaPredicted RBP17.88■□□□□ 0.45
SMARCC2-212ENST00000552566 DPP8Q6V1X1 898 aaPredicted RBP17.88■□□□□ 0.45
SMARCC2-212ENST00000552566 CNTROBQ8N137 903 aa17.88■□□□□ 0.45
SMARCC2-212ENST00000552566 MYH16Q9H6N6 1097 aa17.88■□□□□ 0.45
SMARCC2-212ENST00000552566 PASKQ96RG2 1323 aa17.88■□□□□ 0.45
SMARCC2-212ENST00000552566 ARFGEF2Q9Y6D5 1785 aa17.87■□□□□ 0.45
SMARCC2-212ENST00000552566 E9PSI1 815 aa17.87■□□□□ 0.45
SMARCC2-212ENST00000552566 ITGBL1O95965 494 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms