RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 DZIP3Q86Y13 1208 aaKnown RBP12.74□□□□□ -0.37
TGFBR1-209ENST00000552516 PCMTD1Q96MG8 357 aaPredicted RBP12.74□□□□□ -0.37
TGFBR1-209ENST00000552516 NPC1L1Q9UHC9 1359 aa12.74□□□□□ -0.37
TGFBR1-209ENST00000552516 GOLGA8BA8MQT2 603 aa12.74□□□□□ -0.37
TGFBR1-209ENST00000552516 KINO60870 393 aaKnown RBP12.74□□□□□ -0.37
TGFBR1-209ENST00000552516 XRCC6P12956 609 aaKnown RBP eCLIP12.74□□□□□ -0.372e-6■■■■■ 34.5
TGFBR1-209ENST00000552516 KRT85P78386 507 aa12.74□□□□□ -0.37
TGFBR1-209ENST00000552516 TRIM34Q9BYJ4 488 aa12.74□□□□□ -0.37
TGFBR1-209ENST00000552516 VAT1LQ9HCJ6 419 aa12.74□□□□□ -0.37
TGFBR1-209ENST00000552516 ABCC3O15438 1527 aa12.74□□□□□ -0.37
TGFBR1-209ENST00000552516 GIGYF1O75420 1035 aaPredicted RBP12.74□□□□□ -0.37
TGFBR1-209ENST00000552516 APOBRQ0VD83 1088 aa12.74□□□□□ -0.37
TGFBR1-209ENST00000552516 GLIPR1L2Q4G1C9 344 aa12.74□□□□□ -0.37
TGFBR1-209ENST00000552516 EVI5LQ96CN4 794 aa12.74□□□□□ -0.37
TGFBR1-209ENST00000552516 NAPBQ9H115 298 aa12.74□□□□□ -0.37
TGFBR1-209ENST00000552516 CCDC69A6NI79 296 aa12.73□□□□□ -0.37
TGFBR1-209ENST00000552516 SLC9C2Q5TAH2 1124 aa12.73□□□□□ -0.37
TGFBR1-209ENST00000552516 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.73□□□□□ -0.37
TGFBR1-209ENST00000552516 TMEM94Q12767 1356 aa12.73□□□□□ -0.37
TGFBR1-209ENST00000552516 USP5P45974 858 aa12.73□□□□□ -0.37
TGFBR1-209ENST00000552516 PI16Q6UXB8 463 aa12.73□□□□□ -0.37
TGFBR1-209ENST00000552516 DDX21Q9NR30 783 aaKnown RBP eCLIP12.73□□□□□ -0.37
TGFBR1-209ENST00000552516 KIAA0232Q92628 1395 aa12.73□□□□□ -0.37
TGFBR1-209ENST00000552516 STX6O43752 255 aa12.73□□□□□ -0.37
TGFBR1-209ENST00000552516 SAFBQ15424 915 aaKnown RBP eCLIP12.73□□□□□ -0.37
TGFBR1-209ENST00000552516 PUS3Q9BZE2 481 aaKnown RBP12.73□□□□□ -0.37
TGFBR1-209ENST00000552516 hCG_1642624A0A1W2PR95 340 aa12.72□□□□□ -0.37
TGFBR1-209ENST00000552516 IMMTQ16891 758 aaKnown RBP12.72□□□□□ -0.37
TGFBR1-209ENST00000552516 Q6ZUG5 572 aa12.72□□□□□ -0.37
TGFBR1-209ENST00000552516 EAF2Q96CJ1 260 aaPredicted RBP12.72□□□□□ -0.37
TGFBR1-209ENST00000552516 MYL10Q9BUA6 226 aa12.72□□□□□ -0.37
TGFBR1-209ENST00000552516 C6orf229H3BNL8 230 aa12.72□□□□□ -0.37
TGFBR1-209ENST00000552516 ZNF213O14771 459 aa12.72□□□□□ -0.37
TGFBR1-209ENST00000552516 ECM2O94769 699 aaPredicted RBP12.72□□□□□ -0.37
TGFBR1-209ENST00000552516 LRRC24Q50LG9 513 aa12.72□□□□□ -0.37
TGFBR1-209ENST00000552516 SLC52A2Q9HAB3 445 aa12.72□□□□□ -0.37
TGFBR1-209ENST00000552516 HIP1O00291 1037 aa12.72□□□□□ -0.37
TGFBR1-209ENST00000552516 PRDM1O75626 825 aa12.72□□□□□ -0.37
TGFBR1-209ENST00000552516 PTH1RQ03431 593 aa12.72□□□□□ -0.37
TGFBR1-209ENST00000552516 HOMER1Q86YM7 354 aa12.72□□□□□ -0.37
TGFBR1-209ENST00000552516 NEO1Q92859 1461 aa12.72□□□□□ -0.37
TGFBR1-209ENST00000552516 CWC22Q9HCG8 908 aaKnown RBP12.72□□□□□ -0.37
TGFBR1-209ENST00000552516 RTL1A6NKG5 1358 aa12.71□□□□□ -0.37
TGFBR1-209ENST00000552516 IRS4O14654 1257 aaPredicted RBP12.71□□□□□ -0.37
TGFBR1-209ENST00000552516 MCM2P49736 904 aa12.71□□□□□ -0.37
TGFBR1-209ENST00000552516 KLHL10Q6JEL2 608 aa12.71□□□□□ -0.37
TGFBR1-209ENST00000552516 NEK1Q96PY6 1258 aa12.71□□□□□ -0.37
TGFBR1-209ENST00000552516 UBAC1Q9BSL1 405 aa12.71□□□□□ -0.37
TGFBR1-209ENST00000552516 ZFYVE9O95405 1425 aa12.71□□□□□ -0.37
TGFBR1-209ENST00000552516 ATP2B3Q16720 1220 aa12.71□□□□□ -0.37
TGFBR1-209ENST00000552516 USP48Q86UV5 1035 aa12.71□□□□□ -0.37
TGFBR1-209ENST00000552516 DCAF5Q96JK2 942 aa12.71□□□□□ -0.37
TGFBR1-209ENST00000552516 MLH3Q9UHC1 1453 aa12.71□□□□□ -0.37
TGFBR1-209ENST00000552516 PUS7Q96PZ0 661 aaKnown RBP12.71□□□□□ -0.37
TGFBR1-209ENST00000552516 TRPM1Q7Z4N2 1603 aa12.71□□□□□ -0.37
TGFBR1-209ENST00000552516 E9PCH4 1651 aa12.7□□□□□ -0.38
TGFBR1-209ENST00000552516 IFIT3O14879 490 aaKnown RBP12.7□□□□□ -0.38
TGFBR1-209ENST00000552516 A0A1B0GUL7 405 aa12.7□□□□□ -0.38
TGFBR1-209ENST00000552516 MARCKSP29966 332 aaPredicted RBP12.7□□□□□ -0.38
TGFBR1-209ENST00000552516 AMOTL1Q8IY63 956 aa12.7□□□□□ -0.38
TGFBR1-209ENST00000552516 CEP152O94986 1710 aa12.7□□□□□ -0.38
TGFBR1-209ENST00000552516 ZNF622Q969S3 477 aaKnown RBP eCLIP12.7□□□□□ -0.38
TGFBR1-209ENST00000552516 CMTR1Q8N1G2 835 aaKnown RBP12.7□□□□□ -0.38
TGFBR1-209ENST00000552516 ZHX3Q9H4I2 956 aa12.7□□□□□ -0.38
TGFBR1-209ENST00000552516 MPHOSPH10O00566 681 aaKnown RBP12.69□□□□□ -0.38
TGFBR1-209ENST00000552516 TPM4P67936 248 aa12.69□□□□□ -0.38
TGFBR1-209ENST00000552516 CREB3L3Q68CJ9 461 aa12.69□□□□□ -0.38
TGFBR1-209ENST00000552516 NBPF5PQ86XG9 351 aaPredicted RBP12.69□□□□□ -0.38
TGFBR1-209ENST00000552516 TFCP2L1Q9NZI6 479 aa12.69□□□□□ -0.38
TGFBR1-209ENST00000552516 KLF18A0A0U1RQI7 1052 aa12.69□□□□□ -0.38
TGFBR1-209ENST00000552516 GCKRQ14397 625 aa12.69□□□□□ -0.38
TGFBR1-209ENST00000552516 SART3Q15020 963 aaKnown RBP12.69□□□□□ -0.38
TGFBR1-209ENST00000552516 PAG1Q9NWQ8 432 aa12.69□□□□□ -0.38
TGFBR1-209ENST00000552516 EFCAB6Q5THR3 1501 aa12.69□□□□□ -0.38
TGFBR1-209ENST00000552516 ABCC4O15439 1325 aa12.69□□□□□ -0.38
TGFBR1-209ENST00000552516 GADD45BO75293 160 aaPredicted RBP12.69□□□□□ -0.38
TGFBR1-209ENST00000552516 ZSCAN23Q3MJ62 389 aa12.69□□□□□ -0.38
TGFBR1-209ENST00000552516 KIF1BO60333 1816 aa12.69□□□□□ -0.38
TGFBR1-209ENST00000552516 RIMBP2O15034 1052 aa12.69□□□□□ -0.38
TGFBR1-209ENST00000552516 MBD3O95983 291 aa12.69□□□□□ -0.38
TGFBR1-209ENST00000552516 PDCP20941 246 aa12.69□□□□□ -0.38
TGFBR1-209ENST00000552516 U3KPZ7 1027 aaPredicted RBP12.69□□□□□ -0.38
TGFBR1-209ENST00000552516 PHKG2P15735 406 aa12.68□□□□□ -0.38
TGFBR1-209ENST00000552516 NUP62CLQ9H1M0 184 aa12.68□□□□□ -0.38
TGFBR1-209ENST00000552516 A0A087WWV3 80 aa12.68□□□□□ -0.38
TGFBR1-209ENST00000552516 A0A0D9SFI3 127 aa12.68□□□□□ -0.38
TGFBR1-209ENST00000552516 ESPNB1AK53 854 aa12.68□□□□□ -0.38
TGFBR1-209ENST00000552516 JAK2O60674 1132 aa12.68□□□□□ -0.38
TGFBR1-209ENST00000552516 RASEFQ8IZ41 740 aa12.68□□□□□ -0.38
TGFBR1-209ENST00000552516 SSBP05455 408 aaKnown RBP eCLIP12.68□□□□□ -0.38
TGFBR1-209ENST00000552516 HECW2Q9P2P5 1572 aa12.68□□□□□ -0.38
TGFBR1-209ENST00000552516 HSP90AA2PQ14568 343 aaPredicted RBP12.68□□□□□ -0.38
TGFBR1-209ENST00000552516 ADCK5Q3MIX3 580 aa12.68□□□□□ -0.38
TGFBR1-209ENST00000552516 ARHGEF25Q86VW2 580 aa12.68□□□□□ -0.38
TGFBR1-209ENST00000552516 NACAP1Q9BZK3 213 aa12.67□□□□□ -0.38
TGFBR1-209ENST00000552516 USP6P35125 1406 aa12.67□□□□□ -0.38
TGFBR1-209ENST00000552516 ITGA6P23229 1130 aa12.67□□□□□ -0.38
TGFBR1-209ENST00000552516 C8orf76Q96K31 380 aa12.67□□□□□ -0.38
TGFBR1-209ENST00000552516 MAGEB6Q8N7X4 407 aa12.67□□□□□ -0.38
TGFBR1-209ENST00000552516 GNL3LQ9NVN8 582 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms