RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 DDX21Q9NR30 783 aaKnown RBP eCLIP22.51■■□□□ 1.19
CACNB3-222ENST00000552465 GJA3Q9Y6H8 435 aa22.51■■□□□ 1.19
CACNB3-222ENST00000552465 ABCC12Q96J65 1359 aa22.5■■□□□ 1.19
CACNB3-222ENST00000552465 HOXA10P31260 410 aaPredicted RBP22.5■■□□□ 1.19
CACNB3-222ENST00000552465 LMOD1P29536 600 aaPredicted RBP22.49■■□□□ 1.19
CACNB3-222ENST00000552465 PPP2R1AP30153 589 aa22.49■■□□□ 1.19
CACNB3-222ENST00000552465 RPGRQ92834 1020 aaKnown RBP22.49■■□□□ 1.19
CACNB3-222ENST00000552465 GRIPAP1Q4V328 841 aa22.48■■□□□ 1.19
CACNB3-222ENST00000552465 MAP3K15Q6ZN16 1313 aa22.48■■□□□ 1.19
CACNB3-222ENST00000552465 COL4A5P29400 1685 aa22.47■■□□□ 1.19
CACNB3-222ENST00000552465 EPS15P42566 896 aa22.47■■□□□ 1.19
CACNB3-222ENST00000552465 SCNN1DP51172 638 aa22.47■■□□□ 1.19
CACNB3-222ENST00000552465 LARGE2Q8N3Y3 721 aa22.47■■□□□ 1.19
CACNB3-222ENST00000552465 ABHD8Q96I13 439 aa22.47■■□□□ 1.19
CACNB3-222ENST00000552465 FMR1Q06787 632 aaKnown RBP eCLIP22.46■■□□□ 1.19
CACNB3-222ENST00000552465 TTLL7Q6ZT98 887 aa22.46■■□□□ 1.19
CACNB3-222ENST00000552465 RRP7AQ9Y3A4 280 aaKnown RBP22.46■■□□□ 1.19
CACNB3-222ENST00000552465 SUSD4Q5VX71 490 aa22.45■■□□□ 1.18
CACNB3-222ENST00000552465 KIF6Q6ZMV9 814 aa22.45■■□□□ 1.18
CACNB3-222ENST00000552465 PNISRQ8TF01 805 aaKnown RBP22.45■■□□□ 1.18
CACNB3-222ENST00000552465 RBM17Q96I25 401 aaKnown RBP22.45■■□□□ 1.18
CACNB3-222ENST00000552465 CRAMP1Q96RY5 1269 aa22.45■■□□□ 1.18
CACNB3-222ENST00000552465 GPTP24298 496 aa22.44■■□□□ 1.18
CACNB3-222ENST00000552465 UBN2Q6ZU65 1347 aa22.44■■□□□ 1.18
CACNB3-222ENST00000552465 USP50Q70EL3 339 aaPredicted RBP22.44■■□□□ 1.18
CACNB3-222ENST00000552465 CAPNS2Q96L46 248 aa22.44■■□□□ 1.18
CACNB3-222ENST00000552465 RIC1Q4ADV7 1423 aa22.43■■□□□ 1.18
CACNB3-222ENST00000552465 IBTKQ9P2D0 1353 aaPredicted RBP22.43■■□□□ 1.18
CACNB3-222ENST00000552465 ECE1P42892 770 aa22.43■■□□□ 1.18
CACNB3-222ENST00000552465 EIF4A1P60842 406 aaKnown RBP22.43■■□□□ 1.18
CACNB3-222ENST00000552465 CST9Q5W186 159 aa22.43■■□□□ 1.18
CACNB3-222ENST00000552465 SLC51AQ86UW1 340 aa22.43■■□□□ 1.18
CACNB3-222ENST00000552465 ZNF34Q8IZ26 560 aa22.43■■□□□ 1.18
CACNB3-222ENST00000552465 TCERG1O14776 1098 aaKnown RBP22.42■■□□□ 1.18
CACNB3-222ENST00000552465 PPEF1O14829 653 aaPredicted RBP22.42■■□□□ 1.18
CACNB3-222ENST00000552465 MYL6BP14649 208 aa22.42■■□□□ 1.18
CACNB3-222ENST00000552465 PAXIP1Q6ZW49 1069 aaPredicted RBP22.42■■□□□ 1.18
CACNB3-222ENST00000552465 NIM1KQ8IY84 436 aa22.42■■□□□ 1.18
CACNB3-222ENST00000552465 GPR101Q96P66 508 aaPredicted RBP22.42■■□□□ 1.18
CACNB3-222ENST00000552465 ZBTB3Q9H5J0 574 aa22.42■■□□□ 1.18
CACNB3-222ENST00000552465 LTBP1Q14766 1721 aa22.42■■□□□ 1.18
CACNB3-222ENST00000552465 TRAF5O00463 557 aa22.41■■□□□ 1.18
CACNB3-222ENST00000552465 CYP4F22Q6NT55 531 aa22.41■■□□□ 1.18
CACNB3-222ENST00000552465 C3orf67Q6ZVT6 689 aa22.41■■□□□ 1.18
CACNB3-222ENST00000552465 BEGAINQ9BUH8 593 aa22.41■■□□□ 1.18
CACNB3-222ENST00000552465 NTSR2O95665 410 aa22.4■■□□□ 1.18
CACNB3-222ENST00000552465 TLL2Q9Y6L7 1015 aa22.4■■□□□ 1.18
CACNB3-222ENST00000552465 PPIP5K2O43314 1243 aa22.39■■□□□ 1.17
CACNB3-222ENST00000552465 GRM1Q13255 1194 aa22.39■■□□□ 1.17
CACNB3-222ENST00000552465 GIGYF2Q6Y7W6 1299 aaKnown RBP22.39■■□□□ 1.17
CACNB3-222ENST00000552465 NEFMP07197 916 aa22.38■■□□□ 1.17
CACNB3-222ENST00000552465 PPP1R42Q7Z4L9 355 aa22.38■■□□□ 1.17
CACNB3-222ENST00000552465 VPS33BQ9H267 617 aa22.38■■□□□ 1.17
CACNB3-222ENST00000552465 ADARB2Q9NS39 739 aaKnown RBP22.38■■□□□ 1.17
CACNB3-222ENST00000552465 GPRC5DQ9NZD1 345 aa22.38■■□□□ 1.17
CACNB3-222ENST00000552465 LAMB4A4D0S4 1761 aa22.38■■□□□ 1.17
CACNB3-222ENST00000552465 AOC3Q16853 763 aa22.37■■□□□ 1.17
CACNB3-222ENST00000552465 FAM161AQ3B820 660 aa22.37■■□□□ 1.17
CACNB3-222ENST00000552465 NLRP3Q96P20 1036 aa22.37■■□□□ 1.17
CACNB3-222ENST00000552465 TMX4Q9H1E5 349 aaPredicted RBP22.37■■□□□ 1.17
CACNB3-222ENST00000552465 ATP6V0A2Q9Y487 856 aa22.37■■□□□ 1.17
CACNB3-222ENST00000552465 MAP2K2P36507 400 aa22.36■■□□□ 1.17
CACNB3-222ENST00000552465 CXCL9Q07325 125 aa22.36■■□□□ 1.17
CACNB3-222ENST00000552465 PARP10Q53GL7 1025 aa22.36■■□□□ 1.17
CACNB3-222ENST00000552465 SLC10A5Q5PT55 438 aa22.36■■□□□ 1.17
CACNB3-222ENST00000552465 THUMPD2Q9BTF0 503 aaKnown RBP22.36■■□□□ 1.17
CACNB3-222ENST00000552465 ZNRF3Q9ULT6 936 aa22.36■■□□□ 1.17
CACNB3-222ENST00000552465 NUP98P52948 1817 aa22.36■■□□□ 1.17
CACNB3-222ENST00000552465 PLEKHF1Q96S99 279 aa22.35■■□□□ 1.17
CACNB3-222ENST00000552465 THSD7BQ9C0I4 1608 aa22.35■■□□□ 1.17
CACNB3-222ENST00000552465 ERBB4Q15303 1308 aa22.34■■□□□ 1.17
CACNB3-222ENST00000552465 CCDC85CA6NKD9 419 aa22.34■■□□□ 1.17
CACNB3-222ENST00000552465 AOC2O75106 756 aa22.34■■□□□ 1.17
CACNB3-222ENST00000552465 SUPT20HQ8NEM7 779 aa22.34■■□□□ 1.17
CACNB3-222ENST00000552465 RTFDC1Q9BY42 306 aaPredicted RBP22.34■■□□□ 1.17
CACNB3-222ENST00000552465 CELF2O95319 508 aaKnown RBP22.33■■□□□ 1.17
CACNB3-222ENST00000552465 NFE2L2Q16236 605 aa22.33■■□□□ 1.17
CACNB3-222ENST00000552465 SAPCD2Q86UD0 394 aa22.33■■□□□ 1.17
CACNB3-222ENST00000552465 UTP14AQ9BVJ6 771 aaKnown RBP22.33■■□□□ 1.17
CACNB3-222ENST00000552465 PGAP2Q9UHJ9 254 aa22.33■■□□□ 1.17
CACNB3-222ENST00000552465 TSKSQ9UJT2 592 aa22.33■■□□□ 1.17
CACNB3-222ENST00000552465 KDM3BQ7LBC6 1761 aa22.33■■□□□ 1.16
CACNB3-222ENST00000552465 SLC34A2O95436 690 aa22.32■■□□□ 1.16
CACNB3-222ENST00000552465 GMPSP49915 693 aaPredicted RBP22.32■■□□□ 1.16
CACNB3-222ENST00000552465 LRP10Q7Z4F1 713 aa22.32■■□□□ 1.16
CACNB3-222ENST00000552465 ABCC4O15439 1325 aa22.31■■□□□ 1.16
CACNB3-222ENST00000552465 BBOX1O75936 387 aa22.31■■□□□ 1.16
CACNB3-222ENST00000552465 RGS19P49795 217 aa22.31■■□□□ 1.16
CACNB3-222ENST00000552465 PDIA6Q15084 440 aa22.31■■□□□ 1.16
CACNB3-222ENST00000552465 SP8Q8IXZ3 490 aa22.31■■□□□ 1.16
CACNB3-222ENST00000552465 GLIS2Q9BZE0 524 aaPredicted RBP22.31■■□□□ 1.16
CACNB3-222ENST00000552465 CIAPIN1Q6FI81 312 aa22.3■■□□□ 1.16
CACNB3-222ENST00000552465 DPP8Q6V1X1 898 aaPredicted RBP22.3■■□□□ 1.16
CACNB3-222ENST00000552465 HHIPL1Q96JK4 782 aa22.3■■□□□ 1.16
CACNB3-222ENST00000552465 CA12O43570 354 aa22.29■■□□□ 1.16
CACNB3-222ENST00000552465 MLLT1Q03111 559 aaPredicted RBP22.29■■□□□ 1.16
CACNB3-222ENST00000552465 MPNDQ8N594 471 aa22.29■■□□□ 1.16
CACNB3-222ENST00000552465 ZC3H15Q8WU90 426 aaKnown RBP22.29■■□□□ 1.16
CACNB3-222ENST00000552465 EIF2S2P20042 333 aaKnown RBP22.28■■□□□ 1.16
CACNB3-222ENST00000552465 HIRAP54198 1017 aaPredicted RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms