RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 MAP3K15Q6ZN16 1313 aa18.81■□□□□ 0.6
CHMP1A-210ENST00000551981 RASSF10A6NK89 507 aa18.81■□□□□ 0.6
CHMP1A-210ENST00000551981 LMOD1P29536 600 aaPredicted RBP18.81■□□□□ 0.6
CHMP1A-210ENST00000551981 MAP1SQ66K74 1059 aaPredicted RBP18.81■□□□□ 0.6
CHMP1A-210ENST00000551981 NUTM1Q86Y26 1132 aa18.81■□□□□ 0.6
CHMP1A-210ENST00000551981 RIC1Q4ADV7 1423 aa18.81■□□□□ 0.6
CHMP1A-210ENST00000551981 SNED1Q8TER0 1413 aa18.81■□□□□ 0.6
CHMP1A-210ENST00000551981 IBTKQ9P2D0 1353 aaPredicted RBP18.81■□□□□ 0.6
CHMP1A-210ENST00000551981 DEFB115Q30KQ5 88 aa18.8■□□□□ 0.6
CHMP1A-210ENST00000551981 WBP1LQ9NX94 342 aa18.8■□□□□ 0.6
CHMP1A-210ENST00000551981 ABT1Q9ULW3 272 aaKnown RBP18.8■□□□□ 0.6
CHMP1A-210ENST00000551981 GJA3Q9Y6H8 435 aa18.8■□□□□ 0.6
CHMP1A-210ENST00000551981 HOXA10P31260 410 aaPredicted RBP18.79■□□□□ 0.6
CHMP1A-210ENST00000551981 RBM17Q96I25 401 aaKnown RBP18.79■□□□□ 0.6
CHMP1A-210ENST00000551981 RRP7AQ9Y3A4 280 aaKnown RBP18.79■□□□□ 0.6
CHMP1A-210ENST00000551981 MAP2K1Q02750 393 aaPredicted RBP18.78■□□□□ 0.6
CHMP1A-210ENST00000551981 LARGE2Q8N3Y3 721 aa18.78■□□□□ 0.6
CHMP1A-210ENST00000551981 MYL6BP14649 208 aa18.77■□□□□ 0.6
CHMP1A-210ENST00000551981 GPTP24298 496 aa18.77■□□□□ 0.6
CHMP1A-210ENST00000551981 TTLL7Q6ZT98 887 aa18.77■□□□□ 0.6
CHMP1A-210ENST00000551981 TMX4Q9H1E5 349 aaPredicted RBP18.77■□□□□ 0.6
CHMP1A-210ENST00000551981 ZBTB3Q9H5J0 574 aa18.77■□□□□ 0.6
CHMP1A-210ENST00000551981 WDR33Q9C0J8 1336 aaKnown RBP18.76■□□□□ 0.59
CHMP1A-210ENST00000551981 PPEF1O14829 653 aaPredicted RBP18.76■□□□□ 0.59
CHMP1A-210ENST00000551981 LBX1P52954 281 aa18.76■□□□□ 0.59
CHMP1A-210ENST00000551981 EIF4A1P60842 406 aaKnown RBP18.76■□□□□ 0.59
CHMP1A-210ENST00000551981 CRAMP1Q96RY5 1269 aa18.76■□□□□ 0.59
CHMP1A-210ENST00000551981 DDX21Q9NR30 783 aaKnown RBP eCLIP18.76■□□□□ 0.59
CHMP1A-210ENST00000551981 COL4A5P29400 1685 aa18.76■□□□□ 0.59
CHMP1A-210ENST00000551981 UBN2Q6ZU65 1347 aa18.75■□□□□ 0.59
CHMP1A-210ENST00000551981 LTBP1Q14766 1721 aa18.75■□□□□ 0.59
CHMP1A-210ENST00000551981 SUSD4Q5VX71 490 aa18.75■□□□□ 0.59
CHMP1A-210ENST00000551981 PPP1R42Q7Z4L9 355 aa18.75■□□□□ 0.59
CHMP1A-210ENST00000551981 ERBB4Q15303 1308 aa18.74■□□□□ 0.59
CHMP1A-210ENST00000551981 TRPM7Q96QT4 1865 aa18.74■□□□□ 0.59
CHMP1A-210ENST00000551981 USP50Q70EL3 339 aaPredicted RBP18.74■□□□□ 0.59
CHMP1A-210ENST00000551981 NIM1KQ8IY84 436 aa18.74■□□□□ 0.59
CHMP1A-210ENST00000551981 ZNF34Q8IZ26 560 aa18.74■□□□□ 0.59
CHMP1A-210ENST00000551981 TCERG1O14776 1098 aaKnown RBP18.73■□□□□ 0.59
CHMP1A-210ENST00000551981 NTSR2O95665 410 aa18.73■□□□□ 0.59
CHMP1A-210ENST00000551981 ECE1P42892 770 aa18.73■□□□□ 0.59
CHMP1A-210ENST00000551981 SCNN1DP51172 638 aa18.73■□□□□ 0.59
CHMP1A-210ENST00000551981 NFE2L2Q16236 605 aa18.73■□□□□ 0.59
CHMP1A-210ENST00000551981 PARP10Q53GL7 1025 aa18.73■□□□□ 0.59
CHMP1A-210ENST00000551981 GIGYF2Q6Y7W6 1299 aaKnown RBP18.73■□□□□ 0.59
CHMP1A-210ENST00000551981 PAXIP1Q6ZW49 1069 aaPredicted RBP18.73■□□□□ 0.59
CHMP1A-210ENST00000551981 PNNQ9H307 717 aaKnown RBP18.73■□□□□ 0.59
CHMP1A-210ENST00000551981 MAPK8IP3Q9UPT6 1336 aa18.73■□□□□ 0.59
CHMP1A-210ENST00000551981 THSD7BQ9C0I4 1608 aa18.72■□□□□ 0.59
CHMP1A-210ENST00000551981 PPIP5K2O43314 1243 aa18.72■□□□□ 0.59
CHMP1A-210ENST00000551981 HSPA8P11142 646 aaKnown RBP18.72■□□□□ 0.59
CHMP1A-210ENST00000551981 EPS15P42566 896 aa18.72■□□□□ 0.59
CHMP1A-210ENST00000551981 NLRP3Q96P20 1036 aa18.72■□□□□ 0.59
CHMP1A-210ENST00000551981 BEGAINQ9BUH8 593 aa18.72■□□□□ 0.59
CHMP1A-210ENST00000551981 VPS33BQ9H267 617 aa18.72■□□□□ 0.59
CHMP1A-210ENST00000551981 PLEKHF1Q96S99 279 aa18.71■□□□□ 0.59
CHMP1A-210ENST00000551981 SUPT20HQ8NEM7 779 aa18.7■□□□□ 0.58
CHMP1A-210ENST00000551981 CAPNS2Q96L46 248 aa18.7■□□□□ 0.58
CHMP1A-210ENST00000551981 THUMPD2Q9BTF0 503 aaKnown RBP18.7■□□□□ 0.58
CHMP1A-210ENST00000551981 ATP6V0A2Q9Y487 856 aa18.7■□□□□ 0.58
CHMP1A-210ENST00000551981 C3orf67Q6ZVT6 689 aa18.69■□□□□ 0.58
CHMP1A-210ENST00000551981 UTP14AQ9BVJ6 771 aaKnown RBP18.69■□□□□ 0.58
CHMP1A-210ENST00000551981 ADARB2Q9NS39 739 aaKnown RBP18.69■□□□□ 0.58
CHMP1A-210ENST00000551981 GRM1Q13255 1194 aa18.68■□□□□ 0.58
CHMP1A-210ENST00000551981 AOC3Q16853 763 aa18.68■□□□□ 0.58
CHMP1A-210ENST00000551981 ABHD8Q96I13 439 aa18.68■□□□□ 0.58
CHMP1A-210ENST00000551981 GPRC5DQ9NZD1 345 aa18.68■□□□□ 0.58
CHMP1A-210ENST00000551981 TSPYL4Q9UJ04 414 aa18.68■□□□□ 0.58
CHMP1A-210ENST00000551981 ZNRF3Q9ULT6 936 aa18.68■□□□□ 0.58
CHMP1A-210ENST00000551981 SLC10A5Q5PT55 438 aa18.67■□□□□ 0.58
CHMP1A-210ENST00000551981 GPR101Q96P66 508 aaPredicted RBP18.67■□□□□ 0.58
CHMP1A-210ENST00000551981 ANKRD36CQ5JPF3 1778 aa18.67■□□□□ 0.58
CHMP1A-210ENST00000551981 ABCC4O15439 1325 aa18.67■□□□□ 0.58
CHMP1A-210ENST00000551981 TRAF5O00463 557 aa18.66■□□□□ 0.58
CHMP1A-210ENST00000551981 FMR1Q06787 632 aaKnown RBP eCLIP18.66■□□□□ 0.58
CHMP1A-210ENST00000551981 CST9Q5W186 159 aa18.66■□□□□ 0.58
CHMP1A-210ENST00000551981 CYP4F22Q6NT55 531 aa18.66■□□□□ 0.58
CHMP1A-210ENST00000551981 DPP8Q6V1X1 898 aaPredicted RBP18.66■□□□□ 0.58
CHMP1A-210ENST00000551981 SLC51AQ86UW1 340 aa18.66■□□□□ 0.58
CHMP1A-210ENST00000551981 TLL2Q9Y6L7 1015 aa18.66■□□□□ 0.58
CHMP1A-210ENST00000551981 LAMB2P55268 1798 aa18.65■□□□□ 0.58
CHMP1A-210ENST00000551981 BBOX1O75936 387 aa18.65■□□□□ 0.58
CHMP1A-210ENST00000551981 EIF2S2P20042 333 aaKnown RBP18.65■□□□□ 0.58
CHMP1A-210ENST00000551981 HSP90AB3PQ58FF7 597 aa18.65■□□□□ 0.58
CHMP1A-210ENST00000551981 RTFDC1Q9BY42 306 aaPredicted RBP18.65■□□□□ 0.58
CHMP1A-210ENST00000551981 CDHR2Q9BYE9 1310 aa18.65■□□□□ 0.58
CHMP1A-210ENST00000551981 MAP2K2P36507 400 aa18.64■□□□□ 0.57
CHMP1A-210ENST00000551981 GMPSP49915 693 aaPredicted RBP18.64■□□□□ 0.57
CHMP1A-210ENST00000551981 CXCL9Q07325 125 aa18.64■□□□□ 0.57
CHMP1A-210ENST00000551981 SP8Q8IXZ3 490 aa18.64■□□□□ 0.57
CHMP1A-210ENST00000551981 BABAM1Q9NWV8 329 aa18.64■□□□□ 0.57
CHMP1A-210ENST00000551981 TNIP1Q15025 636 aa18.63■□□□□ 0.57
CHMP1A-210ENST00000551981 PDIA6Q15084 440 aa18.63■□□□□ 0.57
CHMP1A-210ENST00000551981 CIAPIN1Q6FI81 312 aa18.63■□□□□ 0.57
CHMP1A-210ENST00000551981 DDX46Q7L014 1031 aaKnown RBP18.63■□□□□ 0.57
CHMP1A-210ENST00000551981 LRP10Q7Z4F1 713 aa18.63■□□□□ 0.57
CHMP1A-210ENST00000551981 MPNDQ8N594 471 aa18.63■□□□□ 0.57
CHMP1A-210ENST00000551981 BCL2L13Q9BXK5 485 aa18.63■□□□□ 0.57
CHMP1A-210ENST00000551981 CELF2O95319 508 aaKnown RBP18.62■□□□□ 0.57
CHMP1A-210ENST00000551981 KIAA2012Q0VF49 1180 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 1286.3 ms