RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 EIF4A1P60842 406 aaKnown RBP28.77■■■□□ 2.2
SMARCD1-212ENST00000551966 SUSD4Q5VX71 490 aa28.76■■■□□ 2.19
SMARCD1-212ENST00000551966 CC2D2BQ6DHV5 1058 aa28.76■■■□□ 2.19
SMARCD1-212ENST00000551966 AIDAQ96BJ3 306 aa28.76■■■□□ 2.19
SMARCD1-212ENST00000551966 NUP98P52948 1817 aa28.76■■■□□ 2.19
SMARCD1-212ENST00000551966 UBN2Q6ZU65 1347 aa28.75■■■□□ 2.19
SMARCD1-212ENST00000551966 GPTP24298 496 aa28.75■■■□□ 2.19
SMARCD1-212ENST00000551966 LBX1P52954 281 aa28.75■■■□□ 2.19
SMARCD1-212ENST00000551966 GJA3Q9Y6H8 435 aa28.75■■■□□ 2.19
SMARCD1-212ENST00000551966 MYL6BP14649 208 aa28.74■■■□□ 2.19
SMARCD1-212ENST00000551966 FMR1Q06787 632 aaKnown RBP eCLIP28.74■■■□□ 2.194e-6■■□□□ 12.4
SMARCD1-212ENST00000551966 PNISRQ8TF01 805 aaKnown RBP28.74■■■□□ 2.19
SMARCD1-212ENST00000551966 LAMB4A4D0S4 1761 aa28.74■■■□□ 2.19
SMARCD1-212ENST00000551966 EIF6P56537 245 aaKnown RBP28.73■■■□□ 2.19
SMARCD1-212ENST00000551966 ZNF34Q8IZ26 560 aa28.73■■■□□ 2.19
SMARCD1-212ENST00000551966 RPGRQ92834 1020 aaKnown RBP28.73■■■□□ 2.19
SMARCD1-212ENST00000551966 PLEKHF1Q96S99 279 aa28.73■■■□□ 2.19
SMARCD1-212ENST00000551966 ZBTB3Q9H5J0 574 aa28.73■■■□□ 2.19
SMARCD1-212ENST00000551966 LTBP1Q14766 1721 aa28.72■■■□□ 2.19
SMARCD1-212ENST00000551966 EPS15P42566 896 aa28.72■■■□□ 2.19
SMARCD1-212ENST00000551966 SCNN1DP51172 638 aa28.72■■■□□ 2.19
SMARCD1-212ENST00000551966 C3orf67Q6ZVT6 689 aa28.72■■■□□ 2.19
SMARCD1-212ENST00000551966 THUMPD2Q9BTF0 503 aaKnown RBP28.72■■■□□ 2.19
SMARCD1-212ENST00000551966 DDX21Q9NR30 783 aaKnown RBP eCLIP28.72■■■□□ 2.19
SMARCD1-212ENST00000551966 WDR33Q9C0J8 1336 aaKnown RBP28.71■■■□□ 2.19
SMARCD1-212ENST00000551966 KDM3BQ7LBC6 1761 aa28.71■■■□□ 2.19
SMARCD1-212ENST00000551966 TCERG1O14776 1098 aaKnown RBP28.71■■■□□ 2.19
SMARCD1-212ENST00000551966 KIF6Q6ZMV9 814 aa28.71■■■□□ 2.19
SMARCD1-212ENST00000551966 CRAMP1Q96RY5 1269 aa28.71■■■□□ 2.19
SMARCD1-212ENST00000551966 LARGE2Q8N3Y3 721 aa28.7■■■□□ 2.18
SMARCD1-212ENST00000551966 ABT1Q9ULW3 272 aaKnown RBP28.7■■■□□ 2.18
SMARCD1-212ENST00000551966 DLG5Q8TDM6 1919 aa28.7■■■□□ 2.18
SMARCD1-212ENST00000551966 RIC1Q4ADV7 1423 aa28.69■■■□□ 2.18
SMARCD1-212ENST00000551966 NTSR2O95665 410 aa28.69■■■□□ 2.18
SMARCD1-212ENST00000551966 HSPA8P11142 646 aaKnown RBP28.69■■■□□ 2.18
SMARCD1-212ENST00000551966 RBM17Q96I25 401 aaKnown RBP28.69■■■□□ 2.18
SMARCD1-212ENST00000551966 IBTKQ9P2D0 1353 aaPredicted RBP28.68■■■□□ 2.18
SMARCD1-212ENST00000551966 GRIPAP1Q4V328 841 aa28.68■■■□□ 2.18
SMARCD1-212ENST00000551966 GIGYF2Q6Y7W6 1299 aaKnown RBP28.68■■■□□ 2.18
SMARCD1-212ENST00000551966 LMOD1P29536 600 aaPredicted RBP28.67■■■□□ 2.18
SMARCD1-212ENST00000551966 PPEF1O14829 653 aaPredicted RBP28.66■■■□□ 2.18
SMARCD1-212ENST00000551966 NFE2L2Q16236 605 aa28.66■■■□□ 2.18
SMARCD1-212ENST00000551966 MAP2K1Q02750 393 aaPredicted RBP28.65■■■□□ 2.18
SMARCD1-212ENST00000551966 CST9Q5W186 159 aa28.65■■■□□ 2.18
SMARCD1-212ENST00000551966 LRP10Q7Z4F1 713 aa28.65■■■□□ 2.18
SMARCD1-212ENST00000551966 NEFMP07197 916 aa28.64■■■□□ 2.18
SMARCD1-212ENST00000551966 PDIA6Q15084 440 aa28.64■■■□□ 2.18
SMARCD1-212ENST00000551966 USP50Q70EL3 339 aaPredicted RBP28.64■■■□□ 2.18
SMARCD1-212ENST00000551966 TRAF5O00463 557 aa28.63■■■□□ 2.17
SMARCD1-212ENST00000551966 SLC10A5Q5PT55 438 aa28.63■■■□□ 2.17
SMARCD1-212ENST00000551966 PPP1R42Q7Z4L9 355 aa28.62■■■□□ 2.17
SMARCD1-212ENST00000551966 NIM1KQ8IY84 436 aa28.62■■■□□ 2.17
SMARCD1-212ENST00000551966 NLRP3Q96P20 1036 aa28.62■■■□□ 2.17
SMARCD1-212ENST00000551966 PPIP5K2O43314 1243 aa28.61■■■□□ 2.17
SMARCD1-212ENST00000551966 AOC3Q16853 763 aa28.61■■■□□ 2.17
SMARCD1-212ENST00000551966 CAPNS2Q96L46 248 aa28.61■■■□□ 2.17
SMARCD1-212ENST00000551966 ATP6V0A2Q9Y487 856 aa28.61■■■□□ 2.17
SMARCD1-212ENST00000551966 PARP10Q53GL7 1025 aa28.6■■■□□ 2.17
SMARCD1-212ENST00000551966 CYP4F22Q6NT55 531 aa28.6■■■□□ 2.17
SMARCD1-212ENST00000551966 ERBB4Q15303 1308 aa28.6■■■□□ 2.17
SMARCD1-212ENST00000551966 ABHD8Q96I13 439 aa28.59■■■□□ 2.17
SMARCD1-212ENST00000551966 CXCL9Q07325 125 aa28.58■■■□□ 2.17
SMARCD1-212ENST00000551966 PROSER3Q2NL68 480 aa28.58■■■□□ 2.17
SMARCD1-212ENST00000551966 UTP14AQ9BVJ6 771 aaKnown RBP28.58■■■□□ 2.17
SMARCD1-212ENST00000551966 VPS33BQ9H267 617 aa28.58■■■□□ 2.17
SMARCD1-212ENST00000551966 GPRC5DQ9NZD1 345 aa28.58■■■□□ 2.17
SMARCD1-212ENST00000551966 ANXA1P04083 346 aa28.57■■■□□ 2.16
SMARCD1-212ENST00000551966 EIF2S2P20042 333 aaKnown RBP28.57■■■□□ 2.16
SMARCD1-212ENST00000551966 GPR101Q96P66 508 aaPredicted RBP28.57■■■□□ 2.16
SMARCD1-212ENST00000551966 RTFDC1Q9BY42 306 aaPredicted RBP28.57■■■□□ 2.16
SMARCD1-212ENST00000551966 TLL2Q9Y6L7 1015 aa28.57■■■□□ 2.16
SMARCD1-212ENST00000551966 ABCC4O15439 1325 aa28.57■■■□□ 2.16
SMARCD1-212ENST00000551966 PAXIP1Q6ZW49 1069 aaPredicted RBP28.56■■■□□ 2.16
SMARCD1-212ENST00000551966 ADARB2Q9NS39 739 aaKnown RBP28.56■■■□□ 2.16
SMARCD1-212ENST00000551966 ZNRF3Q9ULT6 936 aa28.56■■■□□ 2.16
SMARCD1-212ENST00000551966 ECE1P42892 770 aa28.55■■■□□ 2.16
SMARCD1-212ENST00000551966 GRM1Q13255 1194 aa28.55■■■□□ 2.16
SMARCD1-212ENST00000551966 TSPYL4Q9UJ04 414 aa28.55■■■□□ 2.16
SMARCD1-212ENST00000551966 BBOX1O75936 387 aa28.53■■■□□ 2.16
SMARCD1-212ENST00000551966 SP8Q8IXZ3 490 aa28.53■■■□□ 2.16
SMARCD1-212ENST00000551966 THSD7BQ9C0I4 1608 aa28.53■■■□□ 2.16
SMARCD1-212ENST00000551966 TRPM7Q96QT4 1865 aa28.53■■■□□ 2.16
SMARCD1-212ENST00000551966 AOC2O75106 756 aa28.52■■■□□ 2.16
SMARCD1-212ENST00000551966 GMPSP49915 693 aaPredicted RBP28.52■■■□□ 2.16
SMARCD1-212ENST00000551966 SUPT20HQ8NEM7 779 aa28.52■■■□□ 2.16
SMARCD1-212ENST00000551966 TMX4Q9H1E5 349 aaPredicted RBP28.52■■■□□ 2.16
SMARCD1-212ENST00000551966 PGAP2Q9UHJ9 254 aa28.52■■■□□ 2.16
SMARCD1-212ENST00000551966 HCLS1P14317 486 aaPredicted RBP28.51■■■□□ 2.15
SMARCD1-212ENST00000551966 HIRAP54198 1017 aaPredicted RBP28.51■■■□□ 2.15
SMARCD1-212ENST00000551966 PNNQ9H307 717 aaKnown RBP28.51■■■□□ 2.15
SMARCD1-212ENST00000551966 MAPK8IP3Q9UPT6 1336 aa28.5■■■□□ 2.15
SMARCD1-212ENST00000551966 DPP8Q6V1X1 898 aaPredicted RBP28.5■■■□□ 2.15
SMARCD1-212ENST00000551966 COPS6Q7L5N1 327 aa28.5■■■□□ 2.15
SMARCD1-212ENST00000551966 SAPCD2Q86UD0 394 aa28.5■■■□□ 2.15
SMARCD1-212ENST00000551966 NLRP10Q86W26 655 aa28.5■■■□□ 2.15
SMARCD1-212ENST00000551966 MPNDQ8N594 471 aa28.5■■■□□ 2.15
SMARCD1-212ENST00000551966 GLIS2Q9BZE0 524 aaPredicted RBP28.5■■■□□ 2.15
SMARCD1-212ENST00000551966 RIPK4P57078 832 aa28.49■■■□□ 2.15
SMARCD1-212ENST00000551966 KIAA2012Q0VF49 1180 aa28.49■■■□□ 2.15
SMARCD1-212ENST00000551966 BEGAINQ9BUH8 593 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms