RNA–Protein interactions for RNA: ENST00000551567.1

TROAP-216, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-216ENST00000551567 XAGE3Q8WTP9 111 aa30.13■■■□□ 2.41
TROAP-216ENST00000551567 HTRA3P83110 453 aa30.12■■■□□ 2.41
TROAP-216ENST00000551567 RTKN2Q8IZC4 609 aa30.12■■■□□ 2.41
TROAP-216ENST00000551567 DDNO94850 711 aaPredicted RBP30.11■■■□□ 2.41
TROAP-216ENST00000551567 DDX21Q9NR30 783 aaKnown RBP eCLIP30.11■■■□□ 2.41
TROAP-216ENST00000551567 C3orf67Q6ZVT6 689 aa30.1■■■□□ 2.41
TROAP-216ENST00000551567 CHPF2Q9P2E5 772 aa30.1■■■□□ 2.41
TROAP-216ENST00000551567 APAF1O14727 1248 aa30.09■■■□□ 2.41
TROAP-216ENST00000551567 LAMB2P55268 1798 aa30.09■■■□□ 2.41
TROAP-216ENST00000551567 HDGFL1Q5TGJ6 251 aa30.09■■■□□ 2.41
TROAP-216ENST00000551567 UTP14AQ9BVJ6 771 aaKnown RBP30.09■■■□□ 2.41
TROAP-216ENST00000551567 SNED1Q8TER0 1413 aa30.08■■■□□ 2.41
TROAP-216ENST00000551567 HOXA10P31260 410 aaPredicted RBP30.08■■■□□ 2.41
TROAP-216ENST00000551567 DNAJC5GQ8N7S2 189 aa30.08■■■□□ 2.41
TROAP-216ENST00000551567 CFAP44Q96MT7 982 aa30.08■■■□□ 2.41
TROAP-216ENST00000551567 HSP90AB3PQ58FF7 597 aa30.06■■■□□ 2.4
TROAP-216ENST00000551567 SYNE4Q8N205 404 aa30.06■■■□□ 2.4
TROAP-216ENST00000551567 RBM17Q96I25 401 aaKnown RBP30.06■■■□□ 2.4
TROAP-216ENST00000551567 MBIPQ9NS73 344 aa30.06■■■□□ 2.4
TROAP-216ENST00000551567 ZNF541Q9H0D2 1346 aa30.05■■■□□ 2.4
TROAP-216ENST00000551567 HOXB7P09629 217 aa30.05■■■□□ 2.4
TROAP-216ENST00000551567 SLC51AQ86UW1 340 aa30.05■■■□□ 2.4
TROAP-216ENST00000551567 TCERG1O14776 1098 aaKnown RBP30.04■■■□□ 2.4
TROAP-216ENST00000551567 IARSP41252 1262 aaKnown RBP30.04■■■□□ 2.4
TROAP-216ENST00000551567 NLRP10Q86W26 655 aa30.04■■■□□ 2.4
TROAP-216ENST00000551567 NLRP3Q96P20 1036 aa30.04■■■□□ 2.4
TROAP-216ENST00000551567 CRAMP1Q96RY5 1269 aa30.04■■■□□ 2.4
TROAP-216ENST00000551567 SCN4AP35499 1836 aa30.03■■■□□ 2.4
TROAP-216ENST00000551567 PPEF1O14829 653 aaPredicted RBP30.03■■■□□ 2.4
TROAP-216ENST00000551567 DUSP27Q5VZP5 1158 aa30.03■■■□□ 2.4
TROAP-216ENST00000551567 PSMD1Q99460 953 aa30.03■■■□□ 2.4
TROAP-216ENST00000551567 TCIRG1Q13488 830 aa30.02■■■□□ 2.4
TROAP-216ENST00000551567 CC2D2BQ6DHV5 1058 aa30.02■■■□□ 2.4
TROAP-216ENST00000551567 ZNF428Q96B54 188 aa30.02■■■□□ 2.4
TROAP-216ENST00000551567 RNF123Q5XPI4 1314 aa30.01■■■□□ 2.4
TROAP-216ENST00000551567 ZNF853P0CG23 659 aa30.01■■■□□ 2.39
TROAP-216ENST00000551567 SLC10A5Q5PT55 438 aa30.01■■■□□ 2.39
TROAP-216ENST00000551567 DBF4Q9UBU7 674 aaPredicted RBP30.01■■■□□ 2.39
TROAP-216ENST00000551567 CCDC184Q52MB2 194 aa30■■■□□ 2.39
TROAP-216ENST00000551567 IFT57Q9NWB7 429 aa30■■■□□ 2.39
TROAP-216ENST00000551567 TRMT112Q9UI30 125 aaKnown RBP30■■■□□ 2.39
TROAP-216ENST00000551567 COL4A5P29400 1685 aa30■■■□□ 2.39
TROAP-216ENST00000551567 POTEIP0CG38 1075 aa29.99■■■□□ 2.39
TROAP-216ENST00000551567 POTEJP0CG39 1038 aa29.99■■■□□ 2.39
TROAP-216ENST00000551567 HCLS1P14317 486 aaPredicted RBP29.99■■■□□ 2.39
TROAP-216ENST00000551567 L3MBTL3Q96JM7 780 aaPredicted RBP29.99■■■□□ 2.39
TROAP-216ENST00000551567 IQCA1LA6NCM1 817 aa29.98■■■□□ 2.39
TROAP-216ENST00000551567 GNAI1P63096 354 aa29.98■■■□□ 2.39
TROAP-216ENST00000551567 PLBD2Q8NHP8 589 aa29.98■■■□□ 2.39
TROAP-216ENST00000551567 KLRG1Q96E93 195 aa29.98■■■□□ 2.39
TROAP-216ENST00000551567 DDX60Q8IY21 1712 aaKnown RBP29.98■■■□□ 2.39
TROAP-216ENST00000551567 ABCC4O15439 1325 aa29.97■■■□□ 2.39
TROAP-216ENST00000551567 CALD1Q05682 793 aaKnown RBP29.97■■■□□ 2.39
TROAP-216ENST00000551567 ANKRD13DQ6ZTN6 518 aa29.97■■■□□ 2.39
TROAP-216ENST00000551567 JDP2Q8WYK2 163 aa29.97■■■□□ 2.39
TROAP-216ENST00000551567 SH3TC1Q8TE82 1336 aa29.96■■■□□ 2.39
TROAP-216ENST00000551567 TAF1P21675 1872 aa29.96■■■□□ 2.39
TROAP-216ENST00000551567 FZD9O00144 591 aa29.96■■■□□ 2.39
TROAP-216ENST00000551567 ZEB1P37275 1124 aaPredicted RBP29.96■■■□□ 2.39
TROAP-216ENST00000551567 HYPKQ9NX55 129 aa29.96■■■□□ 2.39
TROAP-216ENST00000551567 ELL2O00472 640 aaPredicted RBP29.95■■■□□ 2.39
TROAP-216ENST00000551567 CHADLQ6NUI6 762 aa29.95■■■□□ 2.39
TROAP-216ENST00000551567 GRIPAP1Q4V328 841 aa29.94■■■□□ 2.38
TROAP-216ENST00000551567 TAF1DQ9H5J8 278 aaPredicted RBP29.94■■■□□ 2.38
TROAP-216ENST00000551567 ATP5J2-PTCD1G3V325 749 aa29.93■■■□□ 2.38
TROAP-216ENST00000551567 ATP6V0A2Q9Y487 856 aa29.93■■■□□ 2.38
TROAP-216ENST00000551567 LARGE2Q8N3Y3 721 aa29.92■■■□□ 2.38
TROAP-216ENST00000551567 TMX4Q9H1E5 349 aaPredicted RBP29.92■■■□□ 2.38
TROAP-216ENST00000551567 ISCA1Q9BUE6 129 aa29.91■■■□□ 2.38
TROAP-216ENST00000551567 HACL1Q9UJ83 578 aa29.91■■■□□ 2.38
TROAP-216ENST00000551567 EAPPQ56P03 285 aaPredicted RBP29.9■■■□□ 2.38
TROAP-216ENST00000551567 DDX46Q7L014 1031 aaKnown RBP29.9■■■□□ 2.38
TROAP-216ENST00000551567 GPC2Q8N158 579 aa29.9■■■□□ 2.38
TROAP-216ENST00000551567 EIF6P56537 245 aaKnown RBP29.89■■■□□ 2.38
TROAP-216ENST00000551567 LDHDQ86WU2 507 aa29.89■■■□□ 2.38
TROAP-216ENST00000551567 C8orf58Q8NAV2 365 aa29.89■■■□□ 2.38
TROAP-216ENST00000551567 FAM89AQ96GI7 184 aa29.89■■■□□ 2.38
TROAP-216ENST00000551567 PHAXQ9H814 394 aaKnown RBP29.89■■■□□ 2.38
TROAP-216ENST00000551567 GJA3Q9Y6H8 435 aa29.89■■■□□ 2.38
TROAP-216ENST00000551567 ADAMTSL1Q8N6G6 1762 aa29.88■■■□□ 2.37
TROAP-216ENST00000551567 PPIP5K2O43314 1243 aa29.87■■■□□ 2.37
TROAP-216ENST00000551567 EPHX2P34913 555 aa29.87■■■□□ 2.37
TROAP-216ENST00000551567 GOLGA2Q08379 1002 aa29.87■■■□□ 2.37
TROAP-216ENST00000551567 RTL5Q5HYW3 569 aaPredicted RBP29.87■■■□□ 2.37
TROAP-216ENST00000551567 JMYQ8N9B5 988 aa29.87■■■□□ 2.37
TROAP-216ENST00000551567 LRRC37AA6NMS7 1700 aa29.86■■■□□ 2.37
TROAP-216ENST00000551567 LTBP1Q14766 1721 aa29.86■■■□□ 2.37
TROAP-216ENST00000551567 BBOX1O75936 387 aa29.86■■■□□ 2.37
TROAP-216ENST00000551567 GRAPQ13588 217 aa29.86■■■□□ 2.37
TROAP-216ENST00000551567 AOC3Q16853 763 aa29.86■■■□□ 2.37
TROAP-216ENST00000551567 RIC3Q7Z5B4 369 aa29.86■■■□□ 2.37
TROAP-216ENST00000551567 NIM1KQ8IY84 436 aa29.86■■■□□ 2.37
TROAP-216ENST00000551567 GRAPLQ8TC17 118 aaPredicted RBP29.86■■■□□ 2.37
TROAP-216ENST00000551567 SP8Q8IXZ3 490 aa29.85■■■□□ 2.37
TROAP-216ENST00000551567 DPP8Q6V1X1 898 aaPredicted RBP29.84■■■□□ 2.37
TROAP-216ENST00000551567 TSR2Q969E8 191 aaKnown RBP29.84■■■□□ 2.37
TROAP-216ENST00000551567 CLEC11AQ9Y240 323 aa29.84■■■□□ 2.37
TROAP-216ENST00000551567 ZNF316A6NFI3 1004 aaPredicted RBP29.83■■■□□ 2.37
TROAP-216ENST00000551567 MPNDQ8N594 471 aa29.83■■■□□ 2.37
TROAP-216ENST00000551567 MRS2Q9HD23 443 aa29.83■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 974.1 ms