RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 IGFBP4P22692 258 aa6.53□□□□□ -1.36
SCAF11-215ENST00000551391 ZNF295-AS1Q8N0V1 137 aa6.53□□□□□ -1.36
SCAF11-215ENST00000551391 STAG2Q8N3U4 1231 aa6.53□□□□□ -1.36
SCAF11-215ENST00000551391 STRN4Q9NRL3 753 aa6.53□□□□□ -1.36
SCAF11-215ENST00000551391 NEUROD1Q13562 356 aa6.52□□□□□ -1.37
SCAF11-215ENST00000551391 OCLNQ16625 522 aa6.52□□□□□ -1.37
SCAF11-215ENST00000551391 ZMYM1Q5SVZ6 1142 aa6.52□□□□□ -1.37
SCAF11-215ENST00000551391 B4GALNT3Q6L9W6 998 aa6.52□□□□□ -1.37
SCAF11-215ENST00000551391 POTEAQ6S8J7 498 aa6.52□□□□□ -1.37
SCAF11-215ENST00000551391 LRRC69Q6ZNQ3 347 aa6.52□□□□□ -1.37
SCAF11-215ENST00000551391 L3MBTL2Q969R5 705 aa6.52□□□□□ -1.37
SCAF11-215ENST00000551391 SLAIN2Q9P270 581 aa6.52□□□□□ -1.37
SCAF11-215ENST00000551391 HCN2Q9UL51 889 aa6.52□□□□□ -1.37
SCAF11-215ENST00000551391 ZNF232Q9UNY5 417 aa6.52□□□□□ -1.37
SCAF11-215ENST00000551391 USP3Q9Y6I4 520 aa6.52□□□□□ -1.37
SCAF11-215ENST00000551391 ATAD2Q6PL18 1390 aa6.52□□□□□ -1.37
SCAF11-215ENST00000551391 CARNS1A5YM72 827 aa6.51□□□□□ -1.37
SCAF11-215ENST00000551391 EFSO43281 561 aa6.51□□□□□ -1.37
SCAF11-215ENST00000551391 C21orf2O43822 256 aa6.51□□□□□ -1.37
SCAF11-215ENST00000551391 BRD1O95696 1058 aa6.51□□□□□ -1.37
SCAF11-215ENST00000551391 SSFA2P28290 1259 aa6.51□□□□□ -1.37
SCAF11-215ENST00000551391 TXLNAP40222 546 aa6.51□□□□□ -1.37
SCAF11-215ENST00000551391 TRIM28Q13263 835 aaKnown RBP6.51□□□□□ -1.37
SCAF11-215ENST00000551391 SLC9A9Q8IVB4 645 aa6.51□□□□□ -1.37
SCAF11-215ENST00000551391 TSPAN10Q9H1Z9 355 aaPredicted RBP6.51□□□□□ -1.37
SCAF11-215ENST00000551391 FOXO3O43524 673 aa6.5□□□□□ -1.37
SCAF11-215ENST00000551391 SIN3BO75182 1162 aa6.5□□□□□ -1.37
SCAF11-215ENST00000551391 ATP2B4P23634 1241 aa6.5□□□□□ -1.37
SCAF11-215ENST00000551391 NOS2P35228 1153 aa6.5□□□□□ -1.37
SCAF11-215ENST00000551391 PSMA6P60900 246 aaKnown RBP6.5□□□□□ -1.37
SCAF11-215ENST00000551391 TEAD4Q15561 434 aa6.5□□□□□ -1.37
SCAF11-215ENST00000551391 NACC1Q96RE7 527 aa6.5□□□□□ -1.37
SCAF11-215ENST00000551391 CXXC1Q9P0U4 656 aaPredicted RBP6.5□□□□□ -1.37
SCAF11-215ENST00000551391 GPC6Q9Y625 555 aaPredicted RBP6.5□□□□□ -1.37
SCAF11-215ENST00000551391 SCO2A0A1W2PP80 73 aa6.49□□□□□ -1.37
SCAF11-215ENST00000551391 M0R082 166 aa6.49□□□□□ -1.37
SCAF11-215ENST00000551391 PRMT3O60678 531 aa6.49□□□□□ -1.37
SCAF11-215ENST00000551391 HIRAP54198 1017 aaPredicted RBP6.49□□□□□ -1.37
SCAF11-215ENST00000551391 PHLDB3Q6NSJ2 640 aa6.49□□□□□ -1.37
SCAF11-215ENST00000551391 ZNF417Q8TAU3 575 aa6.49□□□□□ -1.37
SCAF11-215ENST00000551391 SCG3Q8WXD2 468 aaKnown RBP6.49□□□□□ -1.37
SCAF11-215ENST00000551391 COL26A1Q96A83 441 aa6.49□□□□□ -1.37
SCAF11-215ENST00000551391 PRIMPOLQ96LW4 560 aa6.49□□□□□ -1.37
SCAF11-215ENST00000551391 ZNF587Q96SQ5 575 aaPredicted RBP6.49□□□□□ -1.37
SCAF11-215ENST00000551391 CHMP3Q9Y3E7 222 aa6.49□□□□□ -1.37
SCAF11-215ENST00000551391 SERTM1A2A2V5 107 aa6.48□□□□□ -1.37
SCAF11-215ENST00000551391 ADARB2-AS1A8MUL3 147 aa6.48□□□□□ -1.37
SCAF11-215ENST00000551391 PPP1R12BO60237 982 aaPredicted RBP6.48□□□□□ -1.37
SCAF11-215ENST00000551391 RHPN1Q8TCX5 695 aa6.48□□□□□ -1.37
SCAF11-215ENST00000551391 C2orf49Q9BVC5 232 aaPredicted RBP6.48□□□□□ -1.37
SCAF11-215ENST00000551391 EML1O00423 815 aa6.47□□□□□ -1.37
SCAF11-215ENST00000551391 SFSWAPQ12872 951 aaKnown RBP6.47□□□□□ -1.37
SCAF11-215ENST00000551391 TBCELQ5QJ74 424 aa6.47□□□□□ -1.37
SCAF11-215ENST00000551391 ZDHHC1Q8WTX9 485 aa6.47□□□□□ -1.37
SCAF11-215ENST00000551391 PSMG3-AS1Q96PY0 264 aa6.47□□□□□ -1.37
SCAF11-215ENST00000551391 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.47□□□□□ -1.37
SCAF11-215ENST00000551391 ANKIB1Q9P2G1 1089 aa6.47□□□□□ -1.37
SCAF11-215ENST00000551391 PATL2C9JE40 543 aaKnown RBP6.46□□□□□ -1.38
SCAF11-215ENST00000551391 FAM229AH3BQW9 127 aa6.46□□□□□ -1.38
SCAF11-215ENST00000551391 PTCD1O75127 700 aaKnown RBP6.46□□□□□ -1.38
SCAF11-215ENST00000551391 LGR5O75473 907 aa6.46□□□□□ -1.38
SCAF11-215ENST00000551391 ITGB7P26010 798 aa6.46□□□□□ -1.38
SCAF11-215ENST00000551391 SPEM2Q0P670 501 aa6.46□□□□□ -1.38
SCAF11-215ENST00000551391 FKBP5Q13451 457 aaPredicted RBP6.46□□□□□ -1.38
SCAF11-215ENST00000551391 RSPO4Q2I0M5 234 aaPredicted RBP6.46□□□□□ -1.38
SCAF11-215ENST00000551391 MICALL1Q8N3F8 863 aa6.46□□□□□ -1.38
SCAF11-215ENST00000551391 TNFRSF25Q93038 417 aa6.46□□□□□ -1.38
SCAF11-215ENST00000551391 CEP63Q96MT8 703 aa6.46□□□□□ -1.38
SCAF11-215ENST00000551391 ARID4AP29374 1257 aaPredicted RBP6.45□□□□□ -1.38
SCAF11-215ENST00000551391 ADH7P40394 386 aa6.45□□□□□ -1.38
SCAF11-215ENST00000551391 KCNA1Q09470 495 aa6.45□□□□□ -1.38
SCAF11-215ENST00000551391 TRAPPC3LQ5T215 181 aa6.45□□□□□ -1.38
SCAF11-215ENST00000551391 C1orf53Q5VUE5 145 aa6.45□□□□□ -1.38
SCAF11-215ENST00000551391 SLC30A3Q99726 388 aa6.45□□□□□ -1.38
SCAF11-215ENST00000551391 KRTAP4-8Q9BYQ9 185 aa6.45□□□□□ -1.38
SCAF11-215ENST00000551391 PRDM6Q9NQX0 595 aa6.45□□□□□ -1.38
SCAF11-215ENST00000551391 TPSG1Q9NRR2 321 aa6.45□□□□□ -1.38
SCAF11-215ENST00000551391 GNEQ9Y223 722 aaKnown RBP6.45□□□□□ -1.38
SCAF11-215ENST00000551391 ALBP02768 609 aa6.44□□□□□ -1.38
SCAF11-215ENST00000551391 NKAPLQ5M9Q1 402 aa6.44□□□□□ -1.38
SCAF11-215ENST00000551391 C8orf86Q6ZUL3 223 aa6.44□□□□□ -1.38
SCAF11-215ENST00000551391 TXNDC2Q86VQ3 553 aa6.44□□□□□ -1.38
SCAF11-215ENST00000551391 CHMP7Q8WUX9 453 aaPredicted RBP6.44□□□□□ -1.38
SCAF11-215ENST00000551391 MDFIQ99750 246 aa6.44□□□□□ -1.38
SCAF11-215ENST00000551391 BRD7Q9NPI1 651 aa6.44□□□□□ -1.38
SCAF11-215ENST00000551391 KCNH4Q9UQ05 1017 aa6.44□□□□□ -1.38
SCAF11-215ENST00000551391 MTMR7Q9Y216 660 aa6.44□□□□□ -1.38
SCAF11-215ENST00000551391 HCN4Q9Y3Q4 1203 aa6.44□□□□□ -1.38
SCAF11-215ENST00000551391 C9orf172C9J069 976 aa6.43□□□□□ -1.38
SCAF11-215ENST00000551391 DYRK3O43781 588 aa6.43□□□□□ -1.38
SCAF11-215ENST00000551391 LILRB5O75023 590 aa6.43□□□□□ -1.38
SCAF11-215ENST00000551391 GRIK4Q16099 956 aa6.43□□□□□ -1.38
SCAF11-215ENST00000551391 RAB44Q7Z6P3 723 aaPredicted RBP6.43□□□□□ -1.38
SCAF11-215ENST00000551391 C7orf43Q8WVR3 580 aa6.43□□□□□ -1.38
SCAF11-215ENST00000551391 VTI1AQ96AJ9 217 aa6.43□□□□□ -1.38
SCAF11-215ENST00000551391 MYO19Q96H55 970 aa6.43□□□□□ -1.38
SCAF11-215ENST00000551391 STARD13Q9Y3M8 1113 aa6.43□□□□□ -1.38
SCAF11-215ENST00000551391 TBC1D8BQ0IIM8 1120 aa6.42□□□□□ -1.38
SCAF11-215ENST00000551391 SH3PXD2AQ5TCZ1 1133 aa6.42□□□□□ -1.38
SCAF11-215ENST00000551391 NBPF11Q86T75 865 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms