RNA–Protein interactions for RNA: ENST00000550527.5

APAF1-209, Transcript of apoptotic peptidase activating factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene APAF1, Length 6,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-209ENST00000550527 ARAP1Q96P48 1450 aa5.7□□□□□ -1.5
APAF1-209ENST00000550527 F13A1P00488 732 aa5.7□□□□□ -1.5
APAF1-209ENST00000550527 CNNM3Q8NE01 707 aa5.7□□□□□ -1.5
APAF1-209ENST00000550527 CEP104O60308 925 aa5.7□□□□□ -1.5
APAF1-209ENST00000550527 PNMA6AP0CW24 399 aaPredicted RBP5.7□□□□□ -1.5
APAF1-209ENST00000550527 GJB2P29033 226 aa5.7□□□□□ -1.5
APAF1-209ENST00000550527 RANBP1P43487 201 aa5.7□□□□□ -1.5
APAF1-209ENST00000550527 CCAR1Q8IX12 1150 aaKnown RBP5.7□□□□□ -1.5
APAF1-209ENST00000550527 TMEM57Q8N5G2 664 aa5.7□□□□□ -1.5
APAF1-209ENST00000550527 WHAMMQ8TF30 809 aa5.7□□□□□ -1.5
APAF1-209ENST00000550527 FAM184BQ9ULE4 1060 aa5.7□□□□□ -1.5
APAF1-209ENST00000550527 PPFIA4O75335 1185 aa5.7□□□□□ -1.5
APAF1-209ENST00000550527 SPA17Q15506 151 aa5.7□□□□□ -1.5
APAF1-209ENST00000550527 FBXO38Q6PIJ6 1188 aa5.7□□□□□ -1.5
APAF1-209ENST00000550527 ZNF513Q8N8E2 541 aaPredicted RBP5.7□□□□□ -1.5
APAF1-209ENST00000550527 UBASH3AP57075 661 aa5.7□□□□□ -1.5
APAF1-209ENST00000550527 ZBTB17Q13105 803 aa5.7□□□□□ -1.5
APAF1-209ENST00000550527 PPFIA1Q13136 1202 aa5.7□□□□□ -1.5
APAF1-209ENST00000550527 PSMD2Q13200 908 aa5.7□□□□□ -1.5
APAF1-209ENST00000550527 MAP7Q14244 749 aa5.7□□□□□ -1.5
APAF1-209ENST00000550527 SPECC1Q5M775 1068 aa5.7□□□□□ -1.5
APAF1-209ENST00000550527 PPFIBP2Q8ND30 876 aa5.7□□□□□ -1.5
APAF1-209ENST00000550527 DTNBP1Q96EV8 351 aa5.7□□□□□ -1.5
APAF1-209ENST00000550527 JAKMIP1Q96N16 626 aaKnown RBP5.7□□□□□ -1.5
APAF1-209ENST00000550527 YEATS4O95619 227 aa5.7□□□□□ -1.5
APAF1-209ENST00000550527 DESP17661 470 aa5.7□□□□□ -1.5
APAF1-209ENST00000550527 CLCN6P51797 869 aa5.7□□□□□ -1.5
APAF1-209ENST00000550527 DYNC1I2Q13409 638 aaKnown RBP5.7□□□□□ -1.5
APAF1-209ENST00000550527 CACNA2D3Q8IZS8 1091 aa5.7□□□□□ -1.5
APAF1-209ENST00000550527 GBP5Q96PP8 586 aa5.7□□□□□ -1.5
APAF1-209ENST00000550527 MYOM3Q5VTT5 1437 aa5.69□□□□□ -1.5
APAF1-209ENST00000550527 CCDC160A6NGH7 325 aa5.69□□□□□ -1.5
APAF1-209ENST00000550527 USO1O60763 962 aaKnown RBP5.69□□□□□ -1.5
APAF1-209ENST00000550527 GCFC2P16383 781 aaKnown RBP5.69□□□□□ -1.5
APAF1-209ENST00000550527 NLRP5P59047 1200 aa5.69□□□□□ -1.5
APAF1-209ENST00000550527 SLMAPQ14BN4 828 aa5.69□□□□□ -1.5
APAF1-209ENST00000550527 TSC22D3Q99576 134 aa5.69□□□□□ -1.5
APAF1-209ENST00000550527 SAMD15Q9P1V8 674 aa5.69□□□□□ -1.5
APAF1-209ENST00000550527 BAIAP2L1Q9UHR4 511 aa5.69□□□□□ -1.5
APAF1-209ENST00000550527 GOLGA8KD6RF30 607 aa5.69□□□□□ -1.5
APAF1-209ENST00000550527 CACNA2D4Q7Z3S7 1137 aa5.69□□□□□ -1.5
APAF1-209ENST00000550527 FERMT3Q86UX7 667 aa5.69□□□□□ -1.5
APAF1-209ENST00000550527 AOPEPQ8N6M6 819 aa5.69□□□□□ -1.5
APAF1-209ENST00000550527 GBP7Q8N8V2 638 aaPredicted RBP5.69□□□□□ -1.5
APAF1-209ENST00000550527 ZNF428Q96B54 188 aa5.69□□□□□ -1.5
APAF1-209ENST00000550527 VCX3BQ9H321 246 aa5.69□□□□□ -1.5
APAF1-209ENST00000550527 VCX3AQ9NNX9 186 aa5.69□□□□□ -1.5
APAF1-209ENST00000550527 WDHD1O75717 1129 aaPredicted RBP5.69□□□□□ -1.5
APAF1-209ENST00000550527 ELF1P32519 619 aa5.69□□□□□ -1.5
APAF1-209ENST00000550527 CCT5P48643 541 aa5.69□□□□□ -1.5
APAF1-209ENST00000550527 TTC22Q5TAA0 569 aa5.69□□□□□ -1.5
APAF1-209ENST00000550527 SMARCC2Q8TAQ2 1214 aa5.69□□□□□ -1.5
APAF1-209ENST00000550527 GPT2Q8TD30 523 aa5.69□□□□□ -1.5
APAF1-209ENST00000550527 ALS2CR12Q96Q35 445 aa5.69□□□□□ -1.5
APAF1-209ENST00000550527 CAPS2Q9BXY5 557 aa5.69□□□□□ -1.5
APAF1-209ENST00000550527 TRIM7Q9C029 511 aa5.69□□□□□ -1.5
APAF1-209ENST00000550527 CDC25BP30305 580 aa5.69□□□□□ -1.5
APAF1-209ENST00000550527 RWDD2BP57060 319 aa5.69□□□□□ -1.5
APAF1-209ENST00000550527 GNGT1P63211 74 aa5.69□□□□□ -1.5
APAF1-209ENST00000550527 DDX46Q7L014 1031 aaKnown RBP5.69□□□□□ -1.5
APAF1-209ENST00000550527 RPAP2Q8IXW5 612 aaPredicted RBP5.69□□□□□ -1.5
APAF1-209ENST00000550527 FSIP1Q8NA03 581 aa5.69□□□□□ -1.5
APAF1-209ENST00000550527 RBM42Q9BTD8 480 aaKnown RBP5.69□□□□□ -1.5
APAF1-209ENST00000550527 TPX2Q9ULW0 747 aaKnown RBP5.69□□□□□ -1.5
APAF1-209ENST00000550527 SLC3A2P08195 630 aaKnown RBP5.69□□□□□ -1.5
APAF1-209ENST00000550527 RPSAP08865 295 aaKnown RBP5.69□□□□□ -1.5
APAF1-209ENST00000550527 STK3Q13188 491 aa5.69□□□□□ -1.5
APAF1-209ENST00000550527 BLOC1S2Q6QNY1 142 aa5.69□□□□□ -1.5
APAF1-209ENST00000550527 ZGPATQ8N5A5 531 aaKnown RBP5.69□□□□□ -1.5
APAF1-209ENST00000550527 CCDC113Q9H0I3 377 aa5.69□□□□□ -1.5
APAF1-209ENST00000550527 PDE11AQ9HCR9 933 aa5.69□□□□□ -1.5
APAF1-209ENST00000550527 DACT1Q9NYF0 836 aa5.69□□□□□ -1.5
APAF1-209ENST00000550527 GOLGA6BA6NDN3 693 aa5.68□□□□□ -1.5
APAF1-209ENST00000550527 CBX8Q9HC52 389 aa5.68□□□□□ -1.5
APAF1-209ENST00000550527 CHCHD3Q9NX63 227 aaKnown RBP5.68□□□□□ -1.5
APAF1-209ENST00000550527 PCDHB15Q9Y5E8 787 aa5.68□□□□□ -1.5
APAF1-209ENST00000550527 BCAS4Q8TDM0 211 aa5.68□□□□□ -1.5
APAF1-209ENST00000550527 CEP63Q96MT8 703 aa5.68□□□□□ -1.5
APAF1-209ENST00000550527 ACTR5Q9H9F9 607 aaPredicted RBP5.68□□□□□ -1.5
APAF1-209ENST00000550527 TIAM1Q13009 1591 aa5.68□□□□□ -1.5
APAF1-209ENST00000550527 EVC2Q86UK5 1308 aa5.68□□□□□ -1.5
APAF1-209ENST00000550527 TRIM66O15016 1216 aa5.68□□□□□ -1.5
APAF1-209ENST00000550527 HLTFQ14527 1009 aaKnown RBP eCLIP5.68□□□□□ -1.5
APAF1-209ENST00000550527 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.68□□□□□ -1.5
APAF1-209ENST00000550527 RABGGTAQ92696 567 aa5.68□□□□□ -1.5
APAF1-209ENST00000550527 STMN4Q9H169 189 aaPredicted RBP5.68□□□□□ -1.5
APAF1-209ENST00000550527 FAM204AQ9H8W3 233 aa5.68□□□□□ -1.5
APAF1-209ENST00000550527 RNF216Q9NWF9 866 aaPredicted RBP5.68□□□□□ -1.5
APAF1-209ENST00000550527 ANAPC4Q9UJX5 808 aa5.68□□□□□ -1.5
APAF1-209ENST00000550527 FHOD3Q2V2M9 1422 aa5.68□□□□□ -1.5
APAF1-209ENST00000550527 SEC31AO94979 1220 aaKnown RBP5.68□□□□□ -1.5
APAF1-209ENST00000550527 KMT5BQ4FZB7 885 aa5.68□□□□□ -1.5
APAF1-209ENST00000550527 ZNF569Q5MCW4 686 aa5.68□□□□□ -1.5
APAF1-209ENST00000550527 CFAP58Q5T655 872 aa5.68□□□□□ -1.5
APAF1-209ENST00000550527 TTC41PQ6P2S7 1318 aa5.67□□□□□ -1.5
APAF1-209ENST00000550527 GNAI3P08754 354 aa5.67□□□□□ -1.5
APAF1-209ENST00000550527 GYS2P54840 703 aa5.67□□□□□ -1.5
APAF1-209ENST00000550527 NUP88Q99567 741 aaPredicted RBP5.67□□□□□ -1.5
APAF1-209ENST00000550527 UTP14AQ9BVJ6 771 aaKnown RBP5.67□□□□□ -1.5
APAF1-209ENST00000550527 KANK1Q14678 1352 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms