RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 PNISRQ8TF01 805 aaKnown RBP16.67■□□□□ 0.26
LETMD1-222ENST00000550274 RIC1Q4ADV7 1423 aa16.67■□□□□ 0.26
LETMD1-222ENST00000550274 TAF1P21675 1872 aa16.67■□□□□ 0.26
LETMD1-222ENST00000550274 RNF123Q5XPI4 1314 aa16.67■□□□□ 0.26
LETMD1-222ENST00000550274 IBTKQ9P2D0 1353 aaPredicted RBP16.66■□□□□ 0.26
LETMD1-222ENST00000550274 FZD9O00144 591 aa16.66■□□□□ 0.26
LETMD1-222ENST00000550274 ITGBL1O95965 494 aaPredicted RBP16.66■□□□□ 0.26
LETMD1-222ENST00000550274 NEFMP07197 916 aa16.66■□□□□ 0.26
LETMD1-222ENST00000550274 GPTP24298 496 aa16.66■□□□□ 0.26
LETMD1-222ENST00000550274 NFE2L2Q16236 605 aa16.66■□□□□ 0.26
LETMD1-222ENST00000550274 NYXQ9GZU5 481 aa16.66■□□□□ 0.26
LETMD1-222ENST00000550274 ZBTB3Q9H5J0 574 aa16.66■□□□□ 0.26
LETMD1-222ENST00000550274 HACL1Q9UJ83 578 aa16.66■□□□□ 0.26
LETMD1-222ENST00000550274 EPHX2P34913 555 aa16.65■□□□□ 0.26
LETMD1-222ENST00000550274 SUSD4Q5VX71 490 aa16.65■□□□□ 0.26
LETMD1-222ENST00000550274 KIF6Q6ZMV9 814 aa16.65■□□□□ 0.26
LETMD1-222ENST00000550274 PSMD1Q99460 953 aa16.65■□□□□ 0.26
LETMD1-222ENST00000550274 NTSR2O95665 410 aa16.63■□□□□ 0.25
LETMD1-222ENST00000550274 HOXA10P31260 410 aaPredicted RBP16.63■□□□□ 0.25
LETMD1-222ENST00000550274 C3orf67Q6ZVT6 689 aa16.63■□□□□ 0.25
LETMD1-222ENST00000550274 ZNF34Q8IZ26 560 aa16.63■□□□□ 0.25
LETMD1-222ENST00000550274 GPC2Q8N158 579 aa16.63■□□□□ 0.25
LETMD1-222ENST00000550274 RPGRQ92834 1020 aaKnown RBP16.63■□□□□ 0.25
LETMD1-222ENST00000550274 CLEC11AQ9Y240 323 aa16.63■□□□□ 0.25
LETMD1-222ENST00000550274 TMEM88BA6NKF7 163 aa16.62■□□□□ 0.25
LETMD1-222ENST00000550274 FOXN1O15353 648 aa16.62■□□□□ 0.25
LETMD1-222ENST00000550274 MAP1SQ66K74 1059 aaPredicted RBP16.62■□□□□ 0.25
LETMD1-222ENST00000550274 MAPK8IP3Q9UPT6 1336 aa16.62■□□□□ 0.25
LETMD1-222ENST00000550274 VEGFBP49765 207 aa16.61■□□□□ 0.25
LETMD1-222ENST00000550274 CC2D2BQ6DHV5 1058 aa16.61■□□□□ 0.25
LETMD1-222ENST00000550274 GIGYF2Q6Y7W6 1299 aaKnown RBP16.61■□□□□ 0.25
LETMD1-222ENST00000550274 LRP10Q7Z4F1 713 aa16.61■□□□□ 0.25
LETMD1-222ENST00000550274 JDP2Q8WYK2 163 aa16.61■□□□□ 0.25
LETMD1-222ENST00000550274 ERBB4Q15303 1308 aa16.61■□□□□ 0.25
LETMD1-222ENST00000550274 TCERG1O14776 1098 aaKnown RBP16.6■□□□□ 0.25
LETMD1-222ENST00000550274 PNMA8AQ86V59 439 aaPredicted RBP16.6■□□□□ 0.25
LETMD1-222ENST00000550274 CNTROBQ8N137 903 aa16.6■□□□□ 0.25
LETMD1-222ENST00000550274 CRAMP1Q96RY5 1269 aa16.6■□□□□ 0.25
LETMD1-222ENST00000550274 GJA3Q9Y6H8 435 aa16.6■□□□□ 0.25
LETMD1-222ENST00000550274 THSD7BQ9C0I4 1608 aa16.59■□□□□ 0.25
LETMD1-222ENST00000550274 DDX60Q8IY21 1712 aaKnown RBP16.59■□□□□ 0.25
LETMD1-222ENST00000550274 PPEF1O14829 653 aaPredicted RBP16.59■□□□□ 0.25
LETMD1-222ENST00000550274 EIF6P56537 245 aaKnown RBP16.59■□□□□ 0.25
LETMD1-222ENST00000550274 PDIA6Q15084 440 aa16.59■□□□□ 0.25
LETMD1-222ENST00000550274 PROSER3Q2NL68 480 aa16.59■□□□□ 0.25
LETMD1-222ENST00000550274 RBM17Q96I25 401 aaKnown RBP16.59■□□□□ 0.25
LETMD1-222ENST00000550274 TSPYL4Q9UJ04 414 aa16.59■□□□□ 0.25
LETMD1-222ENST00000550274 ZBTB22O15209 634 aa16.58■□□□□ 0.24
LETMD1-222ENST00000550274 ANXA1P04083 346 aa16.58■□□□□ 0.24
LETMD1-222ENST00000550274 SCNN1DP51172 638 aa16.58■□□□□ 0.24
LETMD1-222ENST00000550274 LARGE2Q8N3Y3 721 aa16.58■□□□□ 0.24
LETMD1-222ENST00000550274 LRRC37AA6NMS7 1700 aa16.57■□□□□ 0.24
LETMD1-222ENST00000550274 EIF2S2P20042 333 aaKnown RBP16.57■□□□□ 0.24
LETMD1-222ENST00000550274 PPP1R42Q7Z4L9 355 aa16.57■□□□□ 0.24
LETMD1-222ENST00000550274 PNNQ9H307 717 aaKnown RBP16.57■□□□□ 0.24
LETMD1-222ENST00000550274 RASSF10A6NK89 507 aa16.56■□□□□ 0.24
LETMD1-222ENST00000550274 EPS15P42566 896 aa16.56■□□□□ 0.24
LETMD1-222ENST00000550274 RIPK4P57078 832 aa16.56■□□□□ 0.24
LETMD1-222ENST00000550274 FMR1Q06787 632 aaKnown RBP eCLIP16.56■□□□□ 0.24
LETMD1-222ENST00000550274 GRIPAP1Q4V328 841 aa16.56■□□□□ 0.24
LETMD1-222ENST00000550274 PARP10Q53GL7 1025 aa16.56■□□□□ 0.24
LETMD1-222ENST00000550274 ABCC4O15439 1325 aa16.55■□□□□ 0.24
LETMD1-222ENST00000550274 LMOD1P29536 600 aaPredicted RBP16.55■□□□□ 0.24
LETMD1-222ENST00000550274 NLRP3Q96P20 1036 aa16.55■□□□□ 0.24
LETMD1-222ENST00000550274 UTP14AQ9BVJ6 771 aaKnown RBP16.55■□□□□ 0.24
LETMD1-222ENST00000550274 WBP1LQ9NX94 342 aa16.55■□□□□ 0.24
LETMD1-222ENST00000550274 PPIP5K2O43314 1243 aa16.54■□□□□ 0.24
LETMD1-222ENST00000550274 AOC3Q16853 763 aa16.54■□□□□ 0.24
LETMD1-222ENST00000550274 DEFB115Q30KQ5 88 aa16.54■□□□□ 0.24
LETMD1-222ENST00000550274 SLC10A5Q5PT55 438 aa16.54■□□□□ 0.24
LETMD1-222ENST00000550274 NIM1KQ8IY84 436 aa16.54■□□□□ 0.24
LETMD1-222ENST00000550274 NECTIN2Q92692 538 aa16.54■□□□□ 0.24
LETMD1-222ENST00000550274 AIDAQ96BJ3 306 aa16.54■□□□□ 0.24
LETMD1-222ENST00000550274 PRDM10Q9NQV6 1147 aa16.54■□□□□ 0.24
LETMD1-222ENST00000550274 DDX21Q9NR30 783 aaKnown RBP eCLIP16.54■□□□□ 0.24
LETMD1-222ENST00000550274 ATP6V0A2Q9Y487 856 aa16.54■□□□□ 0.24
LETMD1-222ENST00000550274 DUOX1Q9NRD9 1551 aa16.54■□□□□ 0.24
LETMD1-222ENST00000550274 POLR2AP24928 1970 aaKnown RBP16.53■□□□□ 0.24
LETMD1-222ENST00000550274 TMPOP42166 694 aaKnown RBP16.53■□□□□ 0.24
LETMD1-222ENST00000550274 CTCFP49711 727 aaPredicted RBP16.53■□□□□ 0.24
LETMD1-222ENST00000550274 ABT1Q9ULW3 272 aaKnown RBP16.53■□□□□ 0.24
LETMD1-222ENST00000550274 WDR33Q9C0J8 1336 aaKnown RBP16.52■□□□□ 0.24
LETMD1-222ENST00000550274 LBX1P52954 281 aa16.52■□□□□ 0.24
LETMD1-222ENST00000550274 KRT24Q2M2I5 525 aa16.52■□□□□ 0.24
LETMD1-222ENST00000550274 COPS6Q7L5N1 327 aa16.52■□□□□ 0.24
LETMD1-222ENST00000550274 NLRP10Q86W26 655 aa16.52■□□□□ 0.24
LETMD1-222ENST00000550274 XAGE3Q8WTP9 111 aa16.52■□□□□ 0.24
LETMD1-222ENST00000550274 BABAM1Q9NWV8 329 aa16.52■□□□□ 0.24
LETMD1-222ENST00000550274 COL4A1P02462 1669 aa16.52■□□□□ 0.23
LETMD1-222ENST00000550274 TRAF5O00463 557 aa16.51■□□□□ 0.23
LETMD1-222ENST00000550274 HCLS1P14317 486 aaPredicted RBP16.51■□□□□ 0.23
LETMD1-222ENST00000550274 AIMP1Q12904 312 aaKnown RBP16.51■□□□□ 0.23
LETMD1-222ENST00000550274 USP50Q70EL3 339 aaPredicted RBP16.51■□□□□ 0.23
LETMD1-222ENST00000550274 RTFDC1Q9BY42 306 aaPredicted RBP16.51■□□□□ 0.23
LETMD1-222ENST00000550274 CXCL9Q07325 125 aa16.5■□□□□ 0.23
LETMD1-222ENST00000550274 ZNF428Q96B54 188 aa16.5■□□□□ 0.23
LETMD1-222ENST00000550274 GPRC5DQ9NZD1 345 aa16.5■□□□□ 0.23
LETMD1-222ENST00000550274 HSPA8P11142 646 aaKnown RBP16.49■□□□□ 0.23
LETMD1-222ENST00000550274 LMOD3Q0VAK6 560 aa16.49■□□□□ 0.23
LETMD1-222ENST00000550274 RALBP1Q15311 655 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms