RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 C7orf43Q8WVR3 580 aa12.67□□□□□ -0.38
HDAC7-229ENST00000549883 RNF181Q9P0P0 153 aa12.67□□□□□ -0.38
HDAC7-229ENST00000549883 IBTKQ9P2D0 1353 aaPredicted RBP12.67□□□□□ -0.38
HDAC7-229ENST00000549883 DICER1Q9UPY3 1922 aaKnown RBP12.66□□□□□ -0.38
HDAC7-229ENST00000549883 IL16Q14005 1332 aa12.66□□□□□ -0.38
HDAC7-229ENST00000549883 TIAM2Q8IVF5 1701 aa12.66□□□□□ -0.38
HDAC7-229ENST00000549883 DDX60Q8IY21 1712 aaKnown RBP12.66□□□□□ -0.38
HDAC7-229ENST00000549883 NPR1P16066 1061 aa12.66□□□□□ -0.38
HDAC7-229ENST00000549883 CRY2Q49AN0 593 aa12.66□□□□□ -0.38
HDAC7-229ENST00000549883 CNKSR1Q969H4 720 aa12.66□□□□□ -0.38
HDAC7-229ENST00000549883 NYXQ9GZU5 481 aa12.66□□□□□ -0.38
HDAC7-229ENST00000549883 HYPKQ9NX55 129 aa12.66□□□□□ -0.38
HDAC7-229ENST00000549883 PDZRN3Q9UPQ7 1066 aa12.66□□□□□ -0.38
HDAC7-229ENST00000549883 COL4A1P02462 1669 aa12.65□□□□□ -0.38
HDAC7-229ENST00000549883 HCLS1P14317 486 aaPredicted RBP12.65□□□□□ -0.38
HDAC7-229ENST00000549883 NCBP3Q53F19 620 aaKnown RBP12.65□□□□□ -0.38
HDAC7-229ENST00000549883 PARP10Q53GL7 1025 aa12.65□□□□□ -0.38
HDAC7-229ENST00000549883 G2E3Q7L622 706 aa12.65□□□□□ -0.38
HDAC7-229ENST00000549883 ISCA1Q9BUE6 129 aa12.65□□□□□ -0.38
HDAC7-229ENST00000549883 UTP14AQ9BVJ6 771 aaKnown RBP12.65□□□□□ -0.38
HDAC7-229ENST00000549883 GPBP1L1Q9HC44 474 aaPredicted RBP12.65□□□□□ -0.38
HDAC7-229ENST00000549883 EXOSC9Q06265 439 aaKnown RBP12.64□□□□□ -0.39
HDAC7-229ENST00000549883 TWISTNBQ3B726 338 aaPredicted RBP12.64□□□□□ -0.39
HDAC7-229ENST00000549883 RTL5Q5HYW3 569 aaPredicted RBP12.64□□□□□ -0.39
HDAC7-229ENST00000549883 PPP1R42Q7Z4L9 355 aa12.64□□□□□ -0.39
HDAC7-229ENST00000549883 WDR63Q8IWG1 891 aa12.64□□□□□ -0.39
HDAC7-229ENST00000549883 NMRK2Q9NPI5 230 aa12.64□□□□□ -0.39
HDAC7-229ENST00000549883 ZNF521Q96K83 1311 aa12.63□□□□□ -0.39
HDAC7-229ENST00000549883 RIC1Q4ADV7 1423 aa12.63□□□□□ -0.39
HDAC7-229ENST00000549883 LMNB1P20700 586 aa12.63□□□□□ -0.39
HDAC7-229ENST00000549883 HSP90AB3PQ58FF7 597 aa12.63□□□□□ -0.39
HDAC7-229ENST00000549883 SLC10A5Q5PT55 438 aa12.63□□□□□ -0.39
HDAC7-229ENST00000549883 CCDC30Q5VVM6 783 aa12.63□□□□□ -0.39
HDAC7-229ENST00000549883 JARID2Q92833 1246 aaPredicted RBP12.63□□□□□ -0.39
HDAC7-229ENST00000549883 FAM89AQ96GI7 184 aa12.63□□□□□ -0.39
HDAC7-229ENST00000549883 TRMT112Q9UI30 125 aaKnown RBP12.63□□□□□ -0.39
HDAC7-229ENST00000549883 KIF3CO14782 793 aa12.62□□□□□ -0.39
HDAC7-229ENST00000549883 VAMP4O75379 141 aa12.62□□□□□ -0.39
HDAC7-229ENST00000549883 HOXA10P31260 410 aaPredicted RBP12.62□□□□□ -0.39
HDAC7-229ENST00000549883 RIC3Q7Z5B4 369 aa12.62□□□□□ -0.39
HDAC7-229ENST00000549883 MYD88Q99836 296 aa12.62□□□□□ -0.39
HDAC7-229ENST00000549883 SNED1Q8TER0 1413 aa12.62□□□□□ -0.39
HDAC7-229ENST00000549883 CACNA1FO60840 1977 aa12.61□□□□□ -0.39
HDAC7-229ENST00000549883 C1QTNF8P60827 252 aa12.61□□□□□ -0.39
HDAC7-229ENST00000549883 GOLGA2Q08379 1002 aa12.61□□□□□ -0.39
HDAC7-229ENST00000549883 RPGRQ92834 1020 aaKnown RBP12.61□□□□□ -0.39
HDAC7-229ENST00000549883 TAOK3Q9H2K8 898 aa12.61□□□□□ -0.39
HDAC7-229ENST00000549883 MAP3K2Q9Y2U5 619 aa12.61□□□□□ -0.39
HDAC7-229ENST00000549883 SH3TC1Q8TE82 1336 aa12.61□□□□□ -0.39
HDAC7-229ENST00000549883 SLC4A2P04920 1241 aa12.6□□□□□ -0.39
HDAC7-229ENST00000549883 ALDH1B1P30837 517 aa12.6□□□□□ -0.39
HDAC7-229ENST00000549883 CCDC93Q567U6 631 aa12.6□□□□□ -0.39
HDAC7-229ENST00000549883 NLRP3Q96P20 1036 aa12.6□□□□□ -0.39
HDAC7-229ENST00000549883 ZNF277Q9NRM2 450 aaPredicted RBP12.6□□□□□ -0.39
HDAC7-229ENST00000549883 COL4A5P29400 1685 aa12.6□□□□□ -0.39
HDAC7-229ENST00000549883 ABCC4O15439 1325 aa12.6□□□□□ -0.39
HDAC7-229ENST00000549883 PI4KAP2A4QPH2 592 aa12.59□□□□□ -0.39
HDAC7-229ENST00000549883 TRIM28Q13263 835 aaKnown RBP12.59□□□□□ -0.39
HDAC7-229ENST00000549883 MIER1Q8N108 512 aa12.59□□□□□ -0.39
HDAC7-229ENST00000549883 PI4KAP1Q8N8J0 262 aa12.59□□□□□ -0.39
HDAC7-229ENST00000549883 RBM17Q96I25 401 aaKnown RBP12.59□□□□□ -0.39
HDAC7-229ENST00000549883 CRAMP1Q96RY5 1269 aa12.59□□□□□ -0.39
HDAC7-229ENST00000549883 METTL22Q9BUU2 404 aaPredicted RBP12.59□□□□□ -0.39
HDAC7-229ENST00000549883 LTBP3Q9NS15 1303 aa12.59□□□□□ -0.39
HDAC7-229ENST00000549883 CCER2I3L3R5 266 aa12.58□□□□□ -0.4
HDAC7-229ENST00000549883 PPEF1O14829 653 aaPredicted RBP12.58□□□□□ -0.4
HDAC7-229ENST00000549883 IGKV5-2P06315 115 aa12.58□□□□□ -0.4
HDAC7-229ENST00000549883 KSR2Q6VAB6 950 aa12.58□□□□□ -0.4
HDAC7-229ENST00000549883 CDCA7LQ96GN5 454 aa12.58□□□□□ -0.4
HDAC7-229ENST00000549883 STK31Q9BXU1 1019 aa12.58□□□□□ -0.4
HDAC7-229ENST00000549883 RRAGCQ9HB90 399 aa12.58□□□□□ -0.4
HDAC7-229ENST00000549883 RNF123Q5XPI4 1314 aa12.58□□□□□ -0.4
HDAC7-229ENST00000549883 FKBP4Q02790 459 aaKnown RBP eCLIP12.57□□□□□ -0.4
HDAC7-229ENST00000549883 FLIIQ13045 1269 aa12.57□□□□□ -0.4
HDAC7-229ENST00000549883 CWF19L2Q2TBE0 894 aaKnown RBP12.57□□□□□ -0.4
HDAC7-229ENST00000549883 IRS4O14654 1257 aaPredicted RBP12.56□□□□□ -0.4
HDAC7-229ENST00000549883 DDX58O95786 925 aaKnown RBP12.56□□□□□ -0.4
HDAC7-229ENST00000549883 SOGA3Q5TF21 947 aa12.56□□□□□ -0.4
HDAC7-229ENST00000549883 DIEXFQ68CQ4 756 aaKnown RBP12.56□□□□□ -0.4
HDAC7-229ENST00000549883 RTKN2Q8IZC4 609 aa12.56□□□□□ -0.4
HDAC7-229ENST00000549883 ZBTB38Q8NAP3 1195 aaPredicted RBP12.56□□□□□ -0.4
HDAC7-229ENST00000549883 CELF1Q92879 486 aaKnown RBP12.56□□□□□ -0.4
HDAC7-229ENST00000549883 MYH16Q9H6N6 1097 aa12.56□□□□□ -0.4
HDAC7-229ENST00000549883 MYH3P11055 1940 aa12.55□□□□□ -0.4
HDAC7-229ENST00000549883 GLTPD2A6NH11 291 aa12.55□□□□□ -0.4
HDAC7-229ENST00000549883 POTECB2RU33 542 aa12.55□□□□□ -0.4
HDAC7-229ENST00000549883 F6X3S4 739 aa12.55□□□□□ -0.4
HDAC7-229ENST00000549883 DDNO94850 711 aaPredicted RBP12.55□□□□□ -0.4
HDAC7-229ENST00000549883 SF3B3Q15393 1217 aaKnown RBP12.55□□□□□ -0.4
HDAC7-229ENST00000549883 CCDC191Q8NCU4 936 aa12.55□□□□□ -0.4
HDAC7-229ENST00000549883 CCDC85AQ96PX6 553 aaPredicted RBP12.55□□□□□ -0.4
HDAC7-229ENST00000549883 CWC25Q9NXE8 425 aaPredicted RBP12.55□□□□□ -0.4
HDAC7-229ENST00000549883 ATP6V0A2Q9Y487 856 aa12.55□□□□□ -0.4
HDAC7-229ENST00000549883 KDM2BQ8NHM5 1336 aa12.55□□□□□ -0.4
HDAC7-229ENST00000549883 ZNF541Q9H0D2 1346 aa12.55□□□□□ -0.4
HDAC7-229ENST00000549883 LRRC37AA6NMS7 1700 aa12.54□□□□□ -0.4
HDAC7-229ENST00000549883 WDR90Q96KV7 1748 aa12.54□□□□□ -0.4
HDAC7-229ENST00000549883 SPEF2Q9C093 1822 aa12.54□□□□□ -0.4
HDAC7-229ENST00000549883 NEURL1BA8MQ27 555 aa12.54□□□□□ -0.4
HDAC7-229ENST00000549883 PCCAP05165 728 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms