RNA–Protein interactions for RNA: ENST00000549770.1

NPAS3-207, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-207ENST00000549770 INTS5Q6P9B9 1019 aaKnown RBP8.46□□□□□ -1.06
NPAS3-207ENST00000549770 RTF1Q92541 710 aaKnown RBP8.46□□□□□ -1.06
NPAS3-207ENST00000549770 ZNF496Q96IT1 587 aaPredicted RBP8.46□□□□□ -1.06
NPAS3-207ENST00000549770 CCDC87Q9NVE4 849 aa8.46□□□□□ -1.06
NPAS3-207ENST00000549770 SRP68Q9UHB9 627 aaKnown RBP8.46□□□□□ -1.06
NPAS3-207ENST00000549770 MYBBP1AQ9BQG0 1328 aaKnown RBP8.46□□□□□ -1.06
NPAS3-207ENST00000549770 CEMIPQ8WUJ3 1361 aa8.46□□□□□ -1.06
NPAS3-207ENST00000549770 BTBD11A6QL63 1104 aa8.45□□□□□ -1.06
NPAS3-207ENST00000549770 NEFMP07197 916 aa8.45□□□□□ -1.06
NPAS3-207ENST00000549770 CYP19A1P11511 503 aaPredicted RBP8.45□□□□□ -1.06
NPAS3-207ENST00000549770 RFC4P35249 363 aa8.45□□□□□ -1.06
NPAS3-207ENST00000549770 ZNF790Q6PG37 636 aa8.45□□□□□ -1.06
NPAS3-207ENST00000549770 CCDC146Q8IYE0 955 aa8.45□□□□□ -1.06
NPAS3-207ENST00000549770 PLEKHF1Q96S99 279 aa8.45□□□□□ -1.06
NPAS3-207ENST00000549770 KCNK17Q96T54 332 aa8.45□□□□□ -1.06
NPAS3-207ENST00000549770 THUMPD2Q9BTF0 503 aaKnown RBP8.45□□□□□ -1.06
NPAS3-207ENST00000549770 MIS18AQ9NYP9 233 aa8.45□□□□□ -1.06
NPAS3-207ENST00000549770 WWC3Q9ULE0 1092 aa8.45□□□□□ -1.06
NPAS3-207ENST00000549770 ZBTB1Q9Y2K1 713 aa8.45□□□□□ -1.06
NPAS3-207ENST00000549770 MAPK8IP3Q9UPT6 1336 aa8.45□□□□□ -1.06
NPAS3-207ENST00000549770 MMP10P09238 476 aa8.44□□□□□ -1.06
NPAS3-207ENST00000549770 CANXP27824 592 aaKnown RBP8.44□□□□□ -1.06
NPAS3-207ENST00000549770 GPR162Q16538 588 aa8.44□□□□□ -1.06
NPAS3-207ENST00000549770 PRKRIP1Q9H875 184 aaPredicted RBP8.44□□□□□ -1.06
NPAS3-207ENST00000549770 ZNF330Q9Y3S2 320 aaPredicted RBP8.44□□□□□ -1.06
NPAS3-207ENST00000549770 HEG1Q9ULI3 1381 aa8.44□□□□□ -1.06
NPAS3-207ENST00000549770 PRAMEF22A3QJZ6 481 aa8.43□□□□□ -1.06
NPAS3-207ENST00000549770 GYS1P13807 737 aa8.43□□□□□ -1.06
NPAS3-207ENST00000549770 PIP4K2AP48426 406 aaPredicted RBP8.43□□□□□ -1.06
NPAS3-207ENST00000549770 NFE2L2Q16236 605 aa8.43□□□□□ -1.06
NPAS3-207ENST00000549770 DMRTA1Q5VZB9 504 aa8.43□□□□□ -1.06
NPAS3-207ENST00000549770 ZDHHC16Q969W1 377 aa8.43□□□□□ -1.06
NPAS3-207ENST00000549770 FMNL2Q96PY5 1086 aa8.43□□□□□ -1.06
NPAS3-207ENST00000549770 RRP7AQ9Y3A4 280 aaKnown RBP8.43□□□□□ -1.06
NPAS3-207ENST00000549770 SOS1Q07889 1333 aaPredicted RBP8.43□□□□□ -1.06
NPAS3-207ENST00000549770 A1BGP04217 495 aa8.42□□□□□ -1.06
NPAS3-207ENST00000549770 YY1P25490 414 aa8.42□□□□□ -1.06
NPAS3-207ENST00000549770 WDR43Q15061 677 aaKnown RBP eCLIP8.42□□□□□ -1.06
NPAS3-207ENST00000549770 NEUROD2Q15784 382 aa8.42□□□□□ -1.06
NPAS3-207ENST00000549770 BCL2L12Q9HB09 334 aa8.42□□□□□ -1.06
NPAS3-207ENST00000549770 PCDHGA10Q9Y5H3 936 aa8.42□□□□□ -1.06
NPAS3-207ENST00000549770 USP42Q9H9J4 1324 aaKnown RBP8.42□□□□□ -1.06
NPAS3-207ENST00000549770 COL15A1P39059 1388 aa8.42□□□□□ -1.06
NPAS3-207ENST00000549770 N4BP2Q86UW6 1770 aaPredicted RBP8.41□□□□□ -1.06
NPAS3-207ENST00000549770 HTATSF1O43719 755 aaKnown RBP8.41□□□□□ -1.06
NPAS3-207ENST00000549770 ZPR1O75312 459 aa8.41□□□□□ -1.06
NPAS3-207ENST00000549770 STARD3NLO95772 234 aa8.41□□□□□ -1.06
NPAS3-207ENST00000549770 YBX3P16989 372 aaKnown RBP eCLIP8.41□□□□□ -1.06
NPAS3-207ENST00000549770 RIPK4P57078 832 aa8.41□□□□□ -1.06
NPAS3-207ENST00000549770 TAF7Q15545 349 aaPredicted RBP8.41□□□□□ -1.06
NPAS3-207ENST00000549770 USPL1Q5W0Q7 1092 aa8.41□□□□□ -1.06
NPAS3-207ENST00000549770 NLGN1Q8N2Q7 840 aa8.41□□□□□ -1.06
NPAS3-207ENST00000549770 DDX12PQ92771 950 aa8.41□□□□□ -1.06
NPAS3-207ENST00000549770 ADAM33Q9BZ11 813 aa8.41□□□□□ -1.06
NPAS3-207ENST00000549770 PNNQ9H307 717 aaKnown RBP8.41□□□□□ -1.06
NPAS3-207ENST00000549770 CD2APQ9Y5K6 639 aa8.41□□□□□ -1.06
NPAS3-207ENST00000549770 PARP3Q9Y6F1 533 aa8.41□□□□□ -1.06
NPAS3-207ENST00000549770 KDM3BQ7LBC6 1761 aa8.4□□□□□ -1.06
NPAS3-207ENST00000549770 PTPREP23469 700 aa8.4□□□□□ -1.06
NPAS3-207ENST00000549770 DDR1Q08345 913 aa8.4□□□□□ -1.06
NPAS3-207ENST00000549770 NBR1Q14596 966 aa8.4□□□□□ -1.06
NPAS3-207ENST00000549770 CCDC184Q52MB2 194 aa8.4□□□□□ -1.06
NPAS3-207ENST00000549770 ADAMTS8Q9UP79 889 aa8.4□□□□□ -1.06
NPAS3-207ENST00000549770 TBC1D2BQ9UPU7 963 aa8.4□□□□□ -1.06
NPAS3-207ENST00000549770 USP16Q9Y5T5 823 aa8.4□□□□□ -1.06
NPAS3-207ENST00000549770 KIAA1551Q9HCM1 1747 aa8.4□□□□□ -1.07
NPAS3-207ENST00000549770 SENP3-EIF4A1A0A087X0R7 540 aa8.39□□□□□ -1.07
NPAS3-207ENST00000549770 SPDYE16A6NNV3 312 aaPredicted RBP8.39□□□□□ -1.07
NPAS3-207ENST00000549770 SNRPA1P09661 255 aaKnown RBP8.39□□□□□ -1.07
NPAS3-207ENST00000549770 TMPOP42166 694 aaKnown RBP8.39□□□□□ -1.07
NPAS3-207ENST00000549770 EIF5P55010 431 aaKnown RBP8.39□□□□□ -1.07
NPAS3-207ENST00000549770 PDIA6Q15084 440 aa8.39□□□□□ -1.07
NPAS3-207ENST00000549770 TYW1BQ6NUM6 668 aa8.39□□□□□ -1.07
NPAS3-207ENST00000549770 ADGRD1Q6QNK2 874 aa8.39□□□□□ -1.07
NPAS3-207ENST00000549770 BICDL1Q6ZP65 573 aa8.39□□□□□ -1.07
NPAS3-207ENST00000549770 PKNOX2Q96KN3 472 aa8.39□□□□□ -1.07
NPAS3-207ENST00000549770 TEX13AQ9BXU3 409 aaPredicted RBP8.39□□□□□ -1.07
NPAS3-207ENST00000549770 NARFQ9UHQ1 456 aa8.39□□□□□ -1.07
NPAS3-207ENST00000549770 SCN7AQ01118 1682 aa8.39□□□□□ -1.07
NPAS3-207ENST00000549770 CHD4Q14839 1912 aa8.39□□□□□ -1.07
NPAS3-207ENST00000549770 C10orf71Q711Q0 1435 aa8.38□□□□□ -1.07
NPAS3-207ENST00000549770 AFDNP55196 1824 aaKnown RBP8.38□□□□□ -1.07
NPAS3-207ENST00000549770 KIF13BQ9NQT8 1826 aa8.38□□□□□ -1.07
NPAS3-207ENST00000549770 LAMB4A4D0S4 1761 aa8.38□□□□□ -1.07
NPAS3-207ENST00000549770 A0A0G2JLW4 131 aa8.38□□□□□ -1.07
NPAS3-207ENST00000549770 NFIXQ14938 502 aa8.38□□□□□ -1.07
NPAS3-207ENST00000549770 RUNDC1Q96C34 613 aa8.38□□□□□ -1.07
NPAS3-207ENST00000549770 PXDNLA1KZ92 1463 aa8.38□□□□□ -1.07
NPAS3-207ENST00000549770 POLRMTO00411 1230 aaKnown RBP8.37□□□□□ -1.07
NPAS3-207ENST00000549770 DPEP1P16444 411 aa8.37□□□□□ -1.07
NPAS3-207ENST00000549770 TM4SF1P30408 202 aa8.37□□□□□ -1.07
NPAS3-207ENST00000549770 IL6STP40189 918 aaPredicted RBP8.37□□□□□ -1.07
NPAS3-207ENST00000549770 EIF4A1P60842 406 aaKnown RBP8.37□□□□□ -1.07
NPAS3-207ENST00000549770 NPM2Q86SE8 214 aaKnown RBP8.37□□□□□ -1.07
NPAS3-207ENST00000549770 CCDC24Q8N4L8 307 aa8.37□□□□□ -1.07
NPAS3-207ENST00000549770 NGEFQ8N5V2 710 aa8.37□□□□□ -1.07
NPAS3-207ENST00000549770 FBXW7Q969H0 707 aa8.37□□□□□ -1.07
NPAS3-207ENST00000549770 EPAS1Q99814 870 aa8.37□□□□□ -1.07
NPAS3-207ENST00000549770 TSPYL4Q9UJ04 414 aa8.37□□□□□ -1.07
NPAS3-207ENST00000549770 LAS1LQ9Y4W2 734 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms