RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 GNL2Q13823 731 aaKnown RBP13.71□□□□□ -0.21
PRIM1-204ENST00000549549 NBPF1Q3BBV0 1214 aa13.71□□□□□ -0.21
PRIM1-204ENST00000549549 RNF166Q96A37 237 aaPredicted RBP13.71□□□□□ -0.21
PRIM1-204ENST00000549549 USP31Q70CQ4 1352 aa13.71□□□□□ -0.22
PRIM1-204ENST00000549549 SPATA31C2B4DYI2 1134 aa13.7□□□□□ -0.22
PRIM1-204ENST00000549549 TNNI2P48788 182 aa13.7□□□□□ -0.22
PRIM1-204ENST00000549549 SLC27A3Q5K4L6 730 aa13.7□□□□□ -0.22
PRIM1-204ENST00000549549 IFFO2Q5TF58 517 aa13.7□□□□□ -0.22
PRIM1-204ENST00000549549 MEIOBQ8N635 442 aa13.7□□□□□ -0.22
PRIM1-204ENST00000549549 ZNF280CQ8ND82 737 aa13.7□□□□□ -0.22
PRIM1-204ENST00000549549 CCDC74AQ96AQ1 378 aa13.7□□□□□ -0.22
PRIM1-204ENST00000549549 C12orf49Q9H741 205 aa13.7□□□□□ -0.22
PRIM1-204ENST00000549549 SMARCA5O60264 1052 aaPredicted RBP13.69□□□□□ -0.22
PRIM1-204ENST00000549549 DPH6Q7L8W6 267 aa13.69□□□□□ -0.22
PRIM1-204ENST00000549549 ZNF654Q8IZM8 581 aa13.69□□□□□ -0.22
PRIM1-204ENST00000549549 KLRG1Q96E93 195 aa13.69□□□□□ -0.22
PRIM1-204ENST00000549549 OSBPL7Q9BZF2 842 aa13.69□□□□□ -0.22
PRIM1-204ENST00000549549 CUEDC1Q9NWM3 386 aaPredicted RBP13.69□□□□□ -0.22
PRIM1-204ENST00000549549 ATP2B1P20020 1258 aa13.68□□□□□ -0.22
PRIM1-204ENST00000549549 INPP5BP32019 993 aa13.68□□□□□ -0.22
PRIM1-204ENST00000549549 IDH3AP50213 366 aa13.68□□□□□ -0.22
PRIM1-204ENST00000549549 RACK1P63244 317 aaKnown RBP13.68□□□□□ -0.22
PRIM1-204ENST00000549549 PDE12Q6L8Q7 609 aaKnown RBP13.68□□□□□ -0.22
PRIM1-204ENST00000549549 ZFYVE28Q9HCC9 887 aa13.68□□□□□ -0.22
PRIM1-204ENST00000549549 SRA1Q9HD15 236 aaKnown RBP13.68□□□□□ -0.22
PRIM1-204ENST00000549549 ANKIB1Q9P2G1 1089 aa13.68□□□□□ -0.22
PRIM1-204ENST00000549549 FNDC3AQ9Y2H6 1198 aaKnown RBP13.68□□□□□ -0.22
PRIM1-204ENST00000549549 J3QL48 77 aa13.67□□□□□ -0.22
PRIM1-204ENST00000549549 FOXC1Q12948 553 aa13.67□□□□□ -0.22
PRIM1-204ENST00000549549 USPL1Q5W0Q7 1092 aa13.67□□□□□ -0.22
PRIM1-204ENST00000549549 POTEGQ6S5H5 508 aa13.67□□□□□ -0.22
PRIM1-204ENST00000549549 SNX29Q8TEQ0 813 aa13.67□□□□□ -0.22
PRIM1-204ENST00000549549 FOXD3Q9UJU5 478 aaPredicted RBP13.67□□□□□ -0.22
PRIM1-204ENST00000549549 ARSDP51689 593 aa13.66□□□□□ -0.22
PRIM1-204ENST00000549549 ZNF394Q53GI3 561 aa13.66□□□□□ -0.22
PRIM1-204ENST00000549549 EPS8L3Q8TE67 593 aaKnown RBP13.66□□□□□ -0.22
PRIM1-204ENST00000549549 AIDAQ96BJ3 306 aa13.66□□□□□ -0.22
PRIM1-204ENST00000549549 TATP17735 454 aaPredicted RBP13.65□□□□□ -0.22
PRIM1-204ENST00000549549 PI16Q6UXB8 463 aa13.65□□□□□ -0.22
PRIM1-204ENST00000549549 TSEN34Q9BSV6 310 aaKnown RBP13.65□□□□□ -0.22
PRIM1-204ENST00000549549 RTCBQ9Y3I0 505 aaKnown RBP13.65□□□□□ -0.22
PRIM1-204ENST00000549549 SPINT1O43278 529 aa13.64□□□□□ -0.23
PRIM1-204ENST00000549549 NBPF10Q6P3W6 841 aaKnown RBP13.64□□□□□ -0.23
PRIM1-204ENST00000549549 HS2ST1Q7LGA3 356 aa13.64□□□□□ -0.23
PRIM1-204ENST00000549549 USP48Q86UV5 1035 aa13.64□□□□□ -0.23
PRIM1-204ENST00000549549 DHX38Q92620 1227 aaKnown RBP13.64□□□□□ -0.23
PRIM1-204ENST00000549549 HSH2DQ96JZ2 352 aa13.64□□□□□ -0.23
PRIM1-204ENST00000549549 INSM2Q96T92 566 aaPredicted RBP13.64□□□□□ -0.23
PRIM1-204ENST00000549549 INPP5FQ9Y2H2 1132 aa13.64□□□□□ -0.23
PRIM1-204ENST00000549549 KCNMB2Q9Y691 235 aa13.64□□□□□ -0.23
PRIM1-204ENST00000549549 ST13P50502 369 aaKnown RBP13.63□□□□□ -0.23
PRIM1-204ENST00000549549 TAF1CQ15572 869 aaPredicted RBP13.63□□□□□ -0.23
PRIM1-204ENST00000549549 TRIP4Q15650 581 aaPredicted RBP13.63□□□□□ -0.23
PRIM1-204ENST00000549549 WDR44Q5JSH3 913 aa13.63□□□□□ -0.23
PRIM1-204ENST00000549549 SRCIN1Q9C0H9 1055 aa13.63□□□□□ -0.23
PRIM1-204ENST00000549549 FAM8A1Q9UBU6 413 aa13.63□□□□□ -0.23
PRIM1-204ENST00000549549 IRS1P35568 1242 aa13.62□□□□□ -0.23
PRIM1-204ENST00000549549 RBL2Q08999 1139 aa13.62□□□□□ -0.23
PRIM1-204ENST00000549549 ZNF438Q7Z4V0 828 aa13.62□□□□□ -0.23
PRIM1-204ENST00000549549 BTLAQ7Z6A9 289 aa13.62□□□□□ -0.23
PRIM1-204ENST00000549549 DNAJC2Q99543 621 aaKnown RBP13.62□□□□□ -0.23
PRIM1-204ENST00000549549 LNPKQ9C0E8 428 aa13.62□□□□□ -0.23
PRIM1-204ENST00000549549 ELP3Q9H9T3 547 aa13.62□□□□□ -0.23
PRIM1-204ENST00000549549 PCDHGB7Q9Y5F8 929 aa13.62□□□□□ -0.23
PRIM1-204ENST00000549549 SMPD1P17405 629 aa13.61□□□□□ -0.23
PRIM1-204ENST00000549549 ATP4AP20648 1035 aa13.61□□□□□ -0.23
PRIM1-204ENST00000549549 ARID5AQ03989 594 aa13.61□□□□□ -0.23
PRIM1-204ENST00000549549 ZIC5Q96T25 663 aa13.61□□□□□ -0.23
PRIM1-204ENST00000549549 TOR4AQ9NXH8 423 aa13.61□□□□□ -0.23
PRIM1-204ENST00000549549 GGT7Q9UJ14 662 aa13.61□□□□□ -0.23
PRIM1-204ENST00000549549 TTC24A2A3L6 582 aaPredicted RBP13.6□□□□□ -0.23
PRIM1-204ENST00000549549 POTECB2RU33 542 aa13.6□□□□□ -0.23
PRIM1-204ENST00000549549 UBAP1LF5GYI3 381 aa13.6□□□□□ -0.23
PRIM1-204ENST00000549549 GDF9O60383 454 aa13.6□□□□□ -0.23
PRIM1-204ENST00000549549 PHKA2P46019 1235 aa13.6□□□□□ -0.23
PRIM1-204ENST00000549549 GIMAP6Q6P9H5 292 aa13.6□□□□□ -0.23
PRIM1-204ENST00000549549 NOP9Q86U38 636 aaKnown RBP13.6□□□□□ -0.23
PRIM1-204ENST00000549549 USP20Q9Y2K6 914 aa13.6□□□□□ -0.23
PRIM1-204ENST00000549549 PHACTR2O75167 634 aa13.59□□□□□ -0.23
PRIM1-204ENST00000549549 DNAJA1P31689 397 aaKnown RBP13.59□□□□□ -0.23
PRIM1-204ENST00000549549 GTF2F1P35269 517 aaKnown RBP eCLIP13.59□□□□□ -0.23
PRIM1-204ENST00000549549 MEI1Q5TIA1 1274 aa13.59□□□□□ -0.23
PRIM1-204ENST00000549549 CMTR1Q8N1G2 835 aaKnown RBP13.59□□□□□ -0.23
PRIM1-204ENST00000549549 CTSOP43234 321 aaPredicted RBP13.58□□□□□ -0.24
PRIM1-204ENST00000549549 BICDL1Q6ZP65 573 aa13.58□□□□□ -0.24
PRIM1-204ENST00000549549 ERMP1Q7Z2K6 904 aa13.58□□□□□ -0.24
PRIM1-204ENST00000549549 GALNT12Q8IXK2 581 aa13.58□□□□□ -0.24
PRIM1-204ENST00000549549 CYP4X1Q8N118 509 aa13.58□□□□□ -0.24
PRIM1-204ENST00000549549 TMEM63CQ9P1W3 806 aa13.58□□□□□ -0.24
PRIM1-204ENST00000549549 USP17L7P0C7H9 530 aa13.57□□□□□ -0.24
PRIM1-204ENST00000549549 GRNP28799 593 aaKnown RBP13.57□□□□□ -0.24
PRIM1-204ENST00000549549 GJA8P48165 433 aa13.57□□□□□ -0.24
PRIM1-204ENST00000549549 POU4F2Q12837 409 aa13.57□□□□□ -0.24
PRIM1-204ENST00000549549 C11orf16Q9NQ32 467 aa13.57□□□□□ -0.24
PRIM1-204ENST00000549549 EGFRP00533 1210 aa13.56□□□□□ -0.24
PRIM1-204ENST00000549549 CHRDQ9H2X0 955 aa13.56□□□□□ -0.24
PRIM1-204ENST00000549549 NEUROD4Q9HD90 331 aa13.56□□□□□ -0.24
PRIM1-204ENST00000549549 POLMQ9NP87 494 aaPredicted RBP13.56□□□□□ -0.24
PRIM1-204ENST00000549549 V9GY48 417 aaPredicted RBP13.56□□□□□ -0.24
PRIM1-204ENST00000549549 NXPE4Q6UWF7 544 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms