RNA–Protein interactions for RNA: ENST00000549443.5

CNOT2-217, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 4

Gene CNOT2, Length 457 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-217ENST00000549443 C8orf58Q8NAV2 365 aa9.65□□□□□ -0.86
CNOT2-217ENST00000549443 RTF1Q92541 710 aaKnown RBP9.65□□□□□ -0.86
CNOT2-217ENST00000549443 TSR2Q969E8 191 aaKnown RBP9.65□□□□□ -0.86
CNOT2-217ENST00000549443 MBIPQ9NS73 344 aa9.65□□□□□ -0.86
CNOT2-217ENST00000549443 FAM198AQ9UFP1 575 aa9.65□□□□□ -0.86
CNOT2-217ENST00000549443 USP16Q9Y5T5 823 aa9.65□□□□□ -0.86
CNOT2-217ENST00000549443 DOT1LQ8TEK3 1739 aa9.65□□□□□ -0.87
CNOT2-217ENST00000549443 HEG1Q9ULI3 1381 aa9.64□□□□□ -0.87
CNOT2-217ENST00000549443 SLFN5Q08AF3 891 aa9.64□□□□□ -0.87
CNOT2-217ENST00000549443 FAM161AQ3B820 660 aa9.64□□□□□ -0.87
CNOT2-217ENST00000549443 WDR63Q8IWG1 891 aa9.64□□□□□ -0.87
CNOT2-217ENST00000549443 SLC4A5Q9BY07 1137 aa9.64□□□□□ -0.87
CNOT2-217ENST00000549443 PDGFDQ9GZP0 370 aaPredicted RBP9.64□□□□□ -0.87
CNOT2-217ENST00000549443 KIAA1468Q9P260 1216 aa9.64□□□□□ -0.87
CNOT2-217ENST00000549443 VPS9D1Q9Y2B5 631 aa9.64□□□□□ -0.87
CNOT2-217ENST00000549443 LAS1LQ9Y4W2 734 aaKnown RBP9.64□□□□□ -0.87
CNOT2-217ENST00000549443 SIPA1L3O60292 1781 aaPredicted RBP9.64□□□□□ -0.87
CNOT2-217ENST00000549443 MRC1P22897 1456 aa9.64□□□□□ -0.87
CNOT2-217ENST00000549443 SRCAPQ6ZRS2 3230 aa9.63□□□□□ -0.87
CNOT2-217ENST00000549443 BTAF1O14981 1849 aa9.63□□□□□ -0.87
CNOT2-217ENST00000549443 VIRMAQ69YN4 1812 aaKnown RBP9.63□□□□□ -0.87
CNOT2-217ENST00000549443 LOC102724428A0A0B4J2F2 783 aa9.63□□□□□ -0.87
CNOT2-217ENST00000549443 IRF6O14896 467 aa9.63□□□□□ -0.87
CNOT2-217ENST00000549443 SIK1P57059 783 aa9.63□□□□□ -0.87
CNOT2-217ENST00000549443 HNRNPUQ00839 825 aaKnown RBP eCLIP9.63□□□□□ -0.87
CNOT2-217ENST00000549443 TEFQ10587 303 aa9.63□□□□□ -0.87
CNOT2-217ENST00000549443 INTS5Q6P9B9 1019 aaKnown RBP9.63□□□□□ -0.87
CNOT2-217ENST00000549443 DNAJC10Q8IXB1 793 aa9.63□□□□□ -0.87
CNOT2-217ENST00000549443 TTC13Q8NBP0 860 aa9.63□□□□□ -0.87
CNOT2-217ENST00000549443 LINC00116Q8NCU8 138 aa9.63□□□□□ -0.87
CNOT2-217ENST00000549443 CCDC102AQ96A19 550 aa9.63□□□□□ -0.87
CNOT2-217ENST00000549443 KRTAP3-3Q9BYR6 98 aa9.63□□□□□ -0.87
CNOT2-217ENST00000549443 KRTAP3-2Q9BYR7 98 aa9.63□□□□□ -0.87
CNOT2-217ENST00000549443 NHSQ6T4R5 1651 aa9.63□□□□□ -0.87
CNOT2-217ENST00000549443 TNS1Q9HBL0 1735 aaKnown RBP9.62□□□□□ -0.87
CNOT2-217ENST00000549443 KCPQ6ZWJ8 1503 aa9.62□□□□□ -0.87
CNOT2-217ENST00000549443 NBPF26B4DH59 902 aa9.62□□□□□ -0.87
CNOT2-217ENST00000549443 TK2O00142 265 aa9.62□□□□□ -0.87
CNOT2-217ENST00000549443 ELL2O00472 640 aaPredicted RBP9.62□□□□□ -0.87
CNOT2-217ENST00000549443 GIGYF1O75420 1035 aaPredicted RBP9.62□□□□□ -0.87
CNOT2-217ENST00000549443 NEFMP07197 916 aa9.62□□□□□ -0.87
CNOT2-217ENST00000549443 CYP19A1P11511 503 aaPredicted RBP9.62□□□□□ -0.87
CNOT2-217ENST00000549443 PIP4K2AP48426 406 aaPredicted RBP9.62□□□□□ -0.87
CNOT2-217ENST00000549443 ZNF827Q17R98 1081 aa9.62□□□□□ -0.87
CNOT2-217ENST00000549443 ADGRD1Q6QNK2 874 aa9.62□□□□□ -0.87
CNOT2-217ENST00000549443 CCDC125Q86Z20 511 aa9.62□□□□□ -0.87
CNOT2-217ENST00000549443 PNMA3Q9UL41 463 aa9.62□□□□□ -0.87
CNOT2-217ENST00000549443 PALLDQ8WX93 1383 aa9.62□□□□□ -0.87
CNOT2-217ENST00000549443 A1BGP04217 495 aa9.61□□□□□ -0.87
CNOT2-217ENST00000549443 NBPF14Q5TI25 921 aa9.61□□□□□ -0.87
CNOT2-217ENST00000549443 DUSP27Q5VZP5 1158 aa9.61□□□□□ -0.87
CNOT2-217ENST00000549443 NBPF10Q6P3W6 841 aaKnown RBP9.61□□□□□ -0.87
CNOT2-217ENST00000549443 NUDT18Q6ZVK8 323 aa9.61□□□□□ -0.87
CNOT2-217ENST00000549443 NBPF15Q8N660 670 aa9.61□□□□□ -0.87
CNOT2-217ENST00000549443 AK7Q96M32 723 aa9.61□□□□□ -0.87
CNOT2-217ENST00000549443 IFT57Q9NWB7 429 aa9.61□□□□□ -0.87
CNOT2-217ENST00000549443 RABGEF1Q9UJ41 708 aa9.61□□□□□ -0.87
CNOT2-217ENST00000549443 ADGRG1Q9Y653 693 aa9.61□□□□□ -0.87
CNOT2-217ENST00000549443 IL16Q14005 1332 aa9.6□□□□□ -0.87
CNOT2-217ENST00000549443 ATP6V1AP38606 617 aa9.6□□□□□ -0.87
CNOT2-217ENST00000549443 EXOSC9Q06265 439 aaKnown RBP9.6□□□□□ -0.87
CNOT2-217ENST00000549443 LRP10Q7Z4F1 713 aa9.6□□□□□ -0.87
CNOT2-217ENST00000549443 RBM46Q8TBY0 533 aaKnown RBP9.6□□□□□ -0.87
CNOT2-217ENST00000549443 TATDN2Q93075 761 aa9.6□□□□□ -0.87
CNOT2-217ENST00000549443 TSPYL4Q9UJ04 414 aa9.6□□□□□ -0.87
CNOT2-217ENST00000549443 SMAPO00193 183 aa9.59□□□□□ -0.87
CNOT2-217ENST00000549443 TCERG1O14776 1098 aaKnown RBP9.59□□□□□ -0.87
CNOT2-217ENST00000549443 VAMP4O75379 141 aa9.59□□□□□ -0.87
CNOT2-217ENST00000549443 OATP04181 439 aa9.59□□□□□ -0.87
CNOT2-217ENST00000549443 LMOD3Q0VAK6 560 aa9.59□□□□□ -0.87
CNOT2-217ENST00000549443 PROSER3Q2NL68 480 aa9.59□□□□□ -0.87
CNOT2-217ENST00000549443 NECTIN2Q92692 538 aa9.59□□□□□ -0.87
CNOT2-217ENST00000549443 SMARCC1Q92922 1105 aaPredicted RBP9.59□□□□□ -0.87
CNOT2-217ENST00000549443 YTHDC1Q96MU7 727 aaKnown RBP9.59□□□□□ -0.87
CNOT2-217ENST00000549443 BABAM1Q9NWV8 329 aa9.59□□□□□ -0.87
CNOT2-217ENST00000549443 CCNL1Q9UK58 526 aaPredicted RBP9.59□□□□□ -0.87
CNOT2-217ENST00000549443 MYH14Q7Z406 1995 aaKnown RBP9.59□□□□□ -0.87
CNOT2-217ENST00000549443 FANCIQ9NVI1 1328 aa9.58□□□□□ -0.88
CNOT2-217ENST00000549443 PAPPAQ13219 1627 aa9.58□□□□□ -0.88
CNOT2-217ENST00000549443 C3orf80F5H4A9 247 aa9.58□□□□□ -0.88
CNOT2-217ENST00000549443 ANXA1P04083 346 aa9.58□□□□□ -0.88
CNOT2-217ENST00000549443 BAG6P46379 1132 aa9.58□□□□□ -0.88
CNOT2-217ENST00000549443 GNAI1P63096 354 aa9.58□□□□□ -0.88
CNOT2-217ENST00000549443 FMNL2Q96PY5 1086 aa9.58□□□□□ -0.88
CNOT2-217ENST00000549443 NBPF3Q9H094 633 aa9.58□□□□□ -0.88
CNOT2-217ENST00000549443 SEPT9Q9UHD8 586 aaPredicted RBP9.58□□□□□ -0.88
CNOT2-217ENST00000549443 LY75O60449 1722 aa9.58□□□□□ -0.88
CNOT2-217ENST00000549443 SNRPA1P09661 255 aaKnown RBP9.57□□□□□ -0.88
CNOT2-217ENST00000549443 CRKLP46109 303 aaKnown RBP9.57□□□□□ -0.88
CNOT2-217ENST00000549443 SLC27A3Q5K4L6 730 aa9.57□□□□□ -0.88
CNOT2-217ENST00000549443 METTL3Q86U44 580 aaKnown RBP9.57□□□□□ -0.88
CNOT2-217ENST00000549443 NGEFQ8N5V2 710 aa9.57□□□□□ -0.88
CNOT2-217ENST00000549443 KDM3BQ7LBC6 1761 aa9.57□□□□□ -0.88
CNOT2-217ENST00000549443 UBR2Q8IWV8 1755 aa9.56□□□□□ -0.88
CNOT2-217ENST00000549443 EIF2S2P20042 333 aaKnown RBP9.56□□□□□ -0.88
CNOT2-217ENST00000549443 SF3B2Q13435 895 aaKnown RBP9.56□□□□□ -0.88
CNOT2-217ENST00000549443 G2E3Q7L622 706 aa9.56□□□□□ -0.88
CNOT2-217ENST00000549443 COL23A1Q86Y22 540 aaPredicted RBP9.56□□□□□ -0.88
CNOT2-217ENST00000549443 MRPL50Q8N5N7 158 aaKnown RBP9.56□□□□□ -0.88
CNOT2-217ENST00000549443 PXYLP1Q8TE99 480 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms