RNA–Protein interactions for RNA: ENST00000549302.1

ARL1-206, Transcript of ADP ribosylation factor like GTPase 1, human

TSL 3

Gene ARL1, Length 725 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARL1-206	ENST00000549302	RABGEF1	Q9UJ41	708 aa		13.14	□□□□□ -0.31
ARL1-206	ENST00000549302	TRIM6-TRIM34	B2RNG4	842 aa		13.13	□□□□□ -0.31
ARL1-206	ENST00000549302	KCNA3	P22001	575 aa		13.13	□□□□□ -0.31
ARL1-206	ENST00000549302	NFATC2IP	Q8NCF5	419 aa		13.13	□□□□□ -0.31
ARL1-206	ENST00000549302	SMC1B	Q8NDV3	1235 aa		13.13	□□□□□ -0.31
ARL1-206	ENST00000549302	RRAGC	Q9HB90	399 aa		13.13	□□□□□ -0.31
ARL1-206	ENST00000549302	USP42	Q9H9J4	1324 aa	Known RBP	13.13	□□□□□ -0.31
ARL1-206	ENST00000549302	CHRNA5	P30532	468 aa		13.12	□□□□□ -0.31
ARL1-206	ENST00000549302	MORC1	Q86VD1	984 aa		13.12	□□□□□ -0.31
ARL1-206	ENST00000549302	NBPF3	Q9H094	633 aa		13.12	□□□□□ -0.31
ARL1-206	ENST00000549302	KIAA1468	Q9P260	1216 aa		13.12	□□□□□ -0.31
ARL1-206	ENST00000549302	TIMELESS	Q9UNS1	1208 aa		13.12	□□□□□ -0.31
ARL1-206	ENST00000549302	TOGARAM1	Q9Y4F4	1720 aa		13.12	□□□□□ -0.31
ARL1-206	ENST00000549302	UBR3	Q6ZT12	1888 aa		13.12	□□□□□ -0.31
ARL1-206	ENST00000549302	TAF1L	Q8IZX4	1826 aa		13.11	□□□□□ -0.31
ARL1-206	ENST00000549302	PKD1L3	Q7Z443	1732 aa		13.11	□□□□□ -0.31
ARL1-206	ENST00000549302	HTRA3	P83110	453 aa		13.11	□□□□□ -0.31
ARL1-206	ENST00000549302	SMYD5	Q6GMV2	418 aa		13.11	□□□□□ -0.31
ARL1-206	ENST00000549302	MRPL50	Q8N5N7	158 aa	Known RBP	13.11	□□□□□ -0.31
ARL1-206	ENST00000549302	PRSS12	P56730	875 aa		13.1	□□□□□ -0.31
ARL1-206	ENST00000549302	DDR1	Q08345	913 aa		13.1	□□□□□ -0.31
ARL1-206	ENST00000549302	SULT6B1	Q6IMI4	303 aa		13.1	□□□□□ -0.31
ARL1-206	ENST00000549302	JMY	Q8N9B5	988 aa		13.1	□□□□□ -0.31
ARL1-206	ENST00000549302	CDCA7L	Q96GN5	454 aa		13.1	□□□□□ -0.31
ARL1-206	ENST00000549302	POLRMT	O00411	1230 aa	Known RBP	13.09	□□□□□ -0.31
ARL1-206	ENST00000549302	USPL1	Q5W0Q7	1092 aa		13.09	□□□□□ -0.31
ARL1-206	ENST00000549302	TNS4	Q8IZW8	715 aa		13.09	□□□□□ -0.31
ARL1-206	ENST00000549302	PANK3	Q9H999	370 aa		13.09	□□□□□ -0.31
ARL1-206	ENST00000549302	NPDC1	Q9NQX5	325 aa	Predicted RBP	13.09	□□□□□ -0.31
ARL1-206	ENST00000549302	TSKS	Q9UJT2	592 aa		13.09	□□□□□ -0.31
ARL1-206	ENST00000549302	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.09	□□□□□ -0.31
ARL1-206	ENST00000549302	VEGFA	P15692	232 aa	Predicted RBP	13.08	□□□□□ -0.32
ARL1-206	ENST00000549302	LMNB1	P20700	586 aa		13.08	□□□□□ -0.32
ARL1-206	ENST00000549302	TM4SF1	P30408	202 aa		13.08	□□□□□ -0.32
ARL1-206	ENST00000549302	AKAP4	Q5JQC9	854 aa		13.08	□□□□□ -0.32
ARL1-206	ENST00000549302	COL13A1	Q5TAT6	717 aa	Predicted RBP	13.08	□□□□□ -0.32
ARL1-206	ENST00000549302	INTS5	Q6P9B9	1019 aa	Known RBP	13.08	□□□□□ -0.32
ARL1-206	ENST00000549302	AEBP1	Q8IUX7	1158 aa		13.08	□□□□□ -0.32
ARL1-206	ENST00000549302	ITGB4	P16144	1822 aa		13.08	□□□□□ -0.32
ARL1-206	ENST00000549302	KIF20B	Q96Q89	1820 aa		13.08	□□□□□ -0.32
ARL1-206	ENST00000549302	KCP	Q6ZWJ8	1503 aa		13.08	□□□□□ -0.32
ARL1-206	ENST00000549302	KDM6A	O15550	1401 aa	Predicted RBP	13.07	□□□□□ -0.32
ARL1-206	ENST00000549302	MAP2	P11137	1827 aa	Known RBP	13.07	□□□□□ -0.32
ARL1-206	ENST00000549302	DNAJC10	Q8IXB1	793 aa		13.07	□□□□□ -0.32
ARL1-206	ENST00000549302	TTLL6	Q8N841	843 aa		13.07	□□□□□ -0.32
ARL1-206	ENST00000549302	GLTPD2	A6NH11	291 aa		13.06	□□□□□ -0.32
ARL1-206	ENST00000549302	GOLGA8CP	A6NN73	597 aa		13.06	□□□□□ -0.32
ARL1-206	ENST00000549302		H0YIN7	160 aa		13.06	□□□□□ -0.32
ARL1-206	ENST00000549302	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.06	□□□□□ -0.32
ARL1-206	ENST00000549302	RASSF7	Q02833	373 aa		13.06	□□□□□ -0.32
ARL1-206	ENST00000549302	PACS2	Q86VP3	889 aa		13.06	□□□□□ -0.32
ARL1-206	ENST00000549302	SLC52A2	Q9HAB3	445 aa		13.06	□□□□□ -0.32
ARL1-206	ENST00000549302	KNSTRN	Q9Y448	316 aa		13.06	□□□□□ -0.32
ARL1-206	ENST00000549302	C4A	P0C0L4	1744 aa		13.05	□□□□□ -0.32
ARL1-206	ENST00000549302	SERPINB2	P05120	415 aa		13.05	□□□□□ -0.32
ARL1-206	ENST00000549302	NFIX	Q14938	502 aa		13.05	□□□□□ -0.32
ARL1-206	ENST00000549302	C2CD5	Q86YS7	1000 aa		13.05	□□□□□ -0.32
ARL1-206	ENST00000549302	KCTD12	Q96CX2	325 aa	Known RBP	13.05	□□□□□ -0.32
ARL1-206	ENST00000549302	FAM198A	Q9UFP1	575 aa		13.05	□□□□□ -0.32
ARL1-206	ENST00000549302	NARF	Q9UHQ1	456 aa		13.05	□□□□□ -0.32
ARL1-206	ENST00000549302	SOS1	Q07889	1333 aa	Predicted RBP	13.05	□□□□□ -0.32
ARL1-206	ENST00000549302	CYP19A1	P11511	503 aa	Predicted RBP	13.04	□□□□□ -0.32
ARL1-206	ENST00000549302	TRIM26	Q12899	539 aa	Predicted RBP	13.04	□□□□□ -0.32
ARL1-206	ENST00000549302	RBM26	Q5T8P6	1007 aa	Known RBP	13.04	□□□□□ -0.32
ARL1-206	ENST00000549302	NPM2	Q86SE8	214 aa	Known RBP	13.04	□□□□□ -0.32
ARL1-206	ENST00000549302		A0A087WZG4	1122 aa		13.03	□□□□□ -0.32
ARL1-206	ENST00000549302	NPHP1	O15259	732 aa		13.03	□□□□□ -0.32
ARL1-206	ENST00000549302	STARD3NL	O95772	234 aa		13.03	□□□□□ -0.32
ARL1-206	ENST00000549302	LAPTM4B	Q86VI4	370 aa		13.03	□□□□□ -0.32
ARL1-206	ENST00000549302	RBM27	Q9P2N5	1060 aa	Known RBP	13.03	□□□□□ -0.32
ARL1-206	ENST00000549302	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.03	□□□□□ -0.32
ARL1-206	ENST00000549302	RNMT	O43148	476 aa	Known RBP	13.02	□□□□□ -0.33
ARL1-206	ENST00000549302	CANX	P27824	592 aa	Known RBP	13.02	□□□□□ -0.33
ARL1-206	ENST00000549302	IL13	P35225	146 aa		13.02	□□□□□ -0.33
ARL1-206	ENST00000549302	PRELP	P51888	382 aa		13.02	□□□□□ -0.33
ARL1-206	ENST00000549302	PTGDR	Q13258	359 aa		13.02	□□□□□ -0.33
ARL1-206	ENST00000549302	SLC39A6	Q13433	755 aa		13.02	□□□□□ -0.33
ARL1-206	ENST00000549302	BICDL1	Q6ZP65	573 aa		13.02	□□□□□ -0.33
ARL1-206	ENST00000549302	TTC5	Q8N0Z6	440 aa		13.02	□□□□□ -0.33
ARL1-206	ENST00000549302	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.02	□□□□□ -0.33
ARL1-206	ENST00000549302	PDZRN3	Q9UPQ7	1066 aa		13.02	□□□□□ -0.33
ARL1-206	ENST00000549302	COL15A1	P39059	1388 aa		13.02	□□□□□ -0.33
ARL1-206	ENST00000549302	HSPA1A	P0DMV8	641 aa	Known RBP	13.01	□□□□□ -0.33
ARL1-206	ENST00000549302	HSPA1B	P0DMV9	641 aa	Known RBP	13.01	□□□□□ -0.33
ARL1-206	ENST00000549302	HSPA5	P11021	654 aa	Known RBP	13.01	□□□□□ -0.33
ARL1-206	ENST00000549302	LGR6	Q9HBX8	967 aa		13.01	□□□□□ -0.33
ARL1-206	ENST00000549302	ZBTB1	Q9Y2K1	713 aa		13.01	□□□□□ -0.33
ARL1-206	ENST00000549302	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.01	□□□□□ -0.33
ARL1-206	ENST00000549302	KIF13B	Q9NQT8	1826 aa		13	□□□□□ -0.33
ARL1-206	ENST00000549302	PDE6B	P35913	854 aa		13	□□□□□ -0.33
ARL1-206	ENST00000549302	PADI6	Q6TGC4	694 aa		13	□□□□□ -0.33
ARL1-206	ENST00000549302	WNT2B	Q93097	391 aa		13	□□□□□ -0.33
ARL1-206	ENST00000549302	ANKRD26	Q9UPS8	1709 aa		12.99	□□□□□ -0.33
ARL1-206	ENST00000549302	HMOX1	P09601	288 aa		12.99	□□□□□ -0.33
ARL1-206	ENST00000549302	ERFE	Q4G0M1	354 aa		12.99	□□□□□ -0.33
ARL1-206	ENST00000549302	TTC13	Q8NBP0	860 aa		12.99	□□□□□ -0.33
ARL1-206	ENST00000549302	ZNF330	Q9Y3S2	320 aa	Predicted RBP	12.99	□□□□□ -0.33
ARL1-206	ENST00000549302	ZNF831	Q5JPB2	1677 aa		12.99	□□□□□ -0.33
ARL1-206	ENST00000549302	CLSPN	Q9HAW4	1339 aa		12.98	□□□□□ -0.33
ARL1-206	ENST00000549302	BRIP1	Q9BX63	1249 aa		12.98	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms