RNA–Protein interactions for RNA: ENST00000549100.5

DEPDC4-206, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-206ENST00000549100 DTX1Q86Y01 620 aa3.93□□□□□ -1.78
DEPDC4-206ENST00000549100 PPARGC1BQ86YN6 1023 aaKnown RBP3.93□□□□□ -1.78
DEPDC4-206ENST00000549100 MARK1Q9P0L2 795 aa3.93□□□□□ -1.78
DEPDC4-206ENST00000549100 RSF1Q96T23 1441 aaPredicted RBP3.93□□□□□ -1.78
DEPDC4-206ENST00000549100 B8ZZF3 427 aa3.92□□□□□ -1.78
DEPDC4-206ENST00000549100 EFSO43281 561 aa3.92□□□□□ -1.78
DEPDC4-206ENST00000549100 SIN3BO75182 1162 aa3.92□□□□□ -1.78
DEPDC4-206ENST00000549100 PPP1R15AO75807 674 aaPredicted RBP3.92□□□□□ -1.78
DEPDC4-206ENST00000549100 STAU1O95793 577 aaKnown RBP3.92□□□□□ -1.78
DEPDC4-206ENST00000549100 WNT11O96014 354 aa3.92□□□□□ -1.78
DEPDC4-206ENST00000549100 RAC1P63000 192 aa3.92□□□□□ -1.78
DEPDC4-206ENST00000549100 LILRA6Q6PI73 481 aa3.92□□□□□ -1.78
DEPDC4-206ENST00000549100 TNFRSF25Q93038 417 aa3.92□□□□□ -1.78
DEPDC4-206ENST00000549100 CARNS1A5YM72 827 aa3.91□□□□□ -1.78
DEPDC4-206ENST00000549100 ATP9BO43861 1147 aa3.91□□□□□ -1.78
DEPDC4-206ENST00000549100 GNRH1P01148 92 aa3.91□□□□□ -1.78
DEPDC4-206ENST00000549100 FAM157BP0CG42 384 aa3.91□□□□□ -1.78
DEPDC4-206ENST00000549100 ADH7P40394 386 aa3.91□□□□□ -1.78
DEPDC4-206ENST00000549100 PLA2G4AP47712 749 aa3.91□□□□□ -1.78
DEPDC4-206ENST00000549100 CDCA8Q53HL2 280 aa3.91□□□□□ -1.78
DEPDC4-206ENST00000549100 DMRTC2Q8IXT2 367 aaPredicted RBP3.91□□□□□ -1.78
DEPDC4-206ENST00000549100 DZIP1LQ8IYY4 767 aaKnown RBP3.91□□□□□ -1.78
DEPDC4-206ENST00000549100 RHBDD1Q8TEB9 315 aa3.91□□□□□ -1.78
DEPDC4-206ENST00000549100 SLC30A3Q99726 388 aa3.91□□□□□ -1.78
DEPDC4-206ENST00000549100 TRAIPQ9BWF2 469 aa3.91□□□□□ -1.78
DEPDC4-206ENST00000549100 PCDHB9Q9Y5E1 797 aa3.91□□□□□ -1.78
DEPDC4-206ENST00000549100 USP17L5A8MUK1 530 aa3.9□□□□□ -1.79
DEPDC4-206ENST00000549100 LILRB5O75023 590 aa3.9□□□□□ -1.79
DEPDC4-206ENST00000549100 ALX3O95076 343 aa3.9□□□□□ -1.79
DEPDC4-206ENST00000549100 SKIP12755 728 aa3.9□□□□□ -1.79
DEPDC4-206ENST00000549100 KANK4Q5T7N3 995 aaPredicted RBP3.9□□□□□ -1.79
DEPDC4-206ENST00000549100 ZDHHC13Q8IUH4 622 aa3.9□□□□□ -1.79
DEPDC4-206ENST00000549100 DEPDC4Q8N2C3 294 aa3.9□□□□□ -1.79
DEPDC4-206ENST00000549100 PHTF2Q8N3S3 785 aa3.9□□□□□ -1.79
DEPDC4-206ENST00000549100 PODXL2Q9NZ53 605 aa3.9□□□□□ -1.79
DEPDC4-206ENST00000549100 CEP126Q9P2H0 1117 aa3.9□□□□□ -1.79
DEPDC4-206ENST00000549100 MROH2BQ7Z745 1585 aa3.89□□□□□ -1.79
DEPDC4-206ENST00000549100 RB1CC1Q8TDY2 1594 aa3.89□□□□□ -1.79
DEPDC4-206ENST00000549100 USP17L3A6NCW0 530 aa3.89□□□□□ -1.79
DEPDC4-206ENST00000549100 USP17L4A6NCW7 530 aa3.89□□□□□ -1.79
DEPDC4-206ENST00000549100 PRR19A6NJB7 356 aa3.89□□□□□ -1.79
DEPDC4-206ENST00000549100 IGLV1-40P01703 118 aa3.89□□□□□ -1.79
DEPDC4-206ENST00000549100 USP17L2Q6R6M4 530 aa3.89□□□□□ -1.79
DEPDC4-206ENST00000549100 USP17L1Q7RTZ2 530 aa3.89□□□□□ -1.79
DEPDC4-206ENST00000549100 NFATC2IPQ8NCF5 419 aa3.89□□□□□ -1.79
DEPDC4-206ENST00000549100 AIDAQ96BJ3 306 aa3.89□□□□□ -1.79
DEPDC4-206ENST00000549100 WIZO95785 1651 aa3.88□□□□□ -1.79
DEPDC4-206ENST00000549100 ATG7O95352 703 aa3.88□□□□□ -1.79
DEPDC4-206ENST00000549100 AFF1P51825 1210 aaKnown RBP3.88□□□□□ -1.79
DEPDC4-206ENST00000549100 NCOA4Q13772 614 aa3.88□□□□□ -1.79
DEPDC4-206ENST00000549100 COL19A1Q14993 1142 aa3.88□□□□□ -1.79
DEPDC4-206ENST00000549100 TSGA10IPQ3SY00 556 aa3.88□□□□□ -1.79
DEPDC4-206ENST00000549100 SLFNL1Q499Z3 407 aa3.88□□□□□ -1.79
DEPDC4-206ENST00000549100 ARSJQ5FYB0 599 aaPredicted RBP3.88□□□□□ -1.79
DEPDC4-206ENST00000549100 CBLL1Q75N03 491 aa3.88□□□□□ -1.79
DEPDC4-206ENST00000549100 RAB44Q7Z6P3 723 aaPredicted RBP3.88□□□□□ -1.79
DEPDC4-206ENST00000549100 PLEKHM2Q8IWE5 1019 aa3.88□□□□□ -1.79
DEPDC4-206ENST00000549100 PLPP7Q8NBV4 271 aa3.88□□□□□ -1.79
DEPDC4-206ENST00000549100 NUDT8Q8WV74 236 aa3.88□□□□□ -1.79
DEPDC4-206ENST00000549100 ASIC4Q96FT7 647 aa3.88□□□□□ -1.79
DEPDC4-206ENST00000549100 CCDC85AQ96PX6 553 aaPredicted RBP3.88□□□□□ -1.79
DEPDC4-206ENST00000549100 CHIC2Q9UKJ5 165 aa3.88□□□□□ -1.79
DEPDC4-206ENST00000549100 ACIN1Q9UKV3 1341 aaKnown RBP3.88□□□□□ -1.79
DEPDC4-206ENST00000549100 TMEM88BA6NKF7 163 aa3.87□□□□□ -1.79
DEPDC4-206ENST00000549100 ITGB5P18084 799 aa3.87□□□□□ -1.79
DEPDC4-206ENST00000549100 GTF2E1P29083 439 aaPredicted RBP3.87□□□□□ -1.79
DEPDC4-206ENST00000549100 CRTC2Q53ET0 693 aaPredicted RBP3.87□□□□□ -1.79
DEPDC4-206ENST00000549100 PCGF6Q9BYE7 350 aa3.87□□□□□ -1.79
DEPDC4-206ENST00000549100 VRTNQ9H8Y1 702 aa3.87□□□□□ -1.79
DEPDC4-206ENST00000549100 ZMIZ1Q9ULJ6 1067 aa3.87□□□□□ -1.79
DEPDC4-206ENST00000549100 USTQ9Y2C2 406 aa3.87□□□□□ -1.79
DEPDC4-206ENST00000549100 PCDHB11Q9Y5F2 797 aa3.87□□□□□ -1.79
DEPDC4-206ENST00000549100 MCCD1P59942 119 aaPredicted RBP3.86□□□□□ -1.79
DEPDC4-206ENST00000549100 SFSWAPQ12872 951 aaKnown RBP3.86□□□□□ -1.79
DEPDC4-206ENST00000549100 AEBP1Q8IUX7 1158 aa3.86□□□□□ -1.79
DEPDC4-206ENST00000549100 FAM9AQ8IZU1 332 aaPredicted RBP3.86□□□□□ -1.79
DEPDC4-206ENST00000549100 STK32AQ8WU08 396 aa3.86□□□□□ -1.79
DEPDC4-206ENST00000549100 JPH1Q9HDC5 661 aaPredicted RBP3.86□□□□□ -1.79
DEPDC4-206ENST00000549100 MKRN1Q9UHC7 482 aaKnown RBP3.86□□□□□ -1.79
DEPDC4-206ENST00000549100 USP17L15C9J2P7 530 aa3.85□□□□□ -1.79
DEPDC4-206ENST00000549100 USP17L10C9JJH3 530 aa3.85□□□□□ -1.79
DEPDC4-206ENST00000549100 USP17L13C9JLJ4 530 aa3.85□□□□□ -1.79
DEPDC4-206ENST00000549100 USP17L12C9JPN9 530 aa3.85□□□□□ -1.79
DEPDC4-206ENST00000549100 USP17L11C9JVI0 530 aa3.85□□□□□ -1.79
DEPDC4-206ENST00000549100 USP17L21D6R901 530 aa3.85□□□□□ -1.79
DEPDC4-206ENST00000549100 USP17L18D6R9N7 530 aa3.85□□□□□ -1.79
DEPDC4-206ENST00000549100 USP17L22D6RA61 530 aa3.85□□□□□ -1.79
DEPDC4-206ENST00000549100 USP17L17D6RBQ6 530 aa3.85□□□□□ -1.79
DEPDC4-206ENST00000549100 USP17L19D6RCP7 530 aa3.85□□□□□ -1.79
DEPDC4-206ENST00000549100 USP17L20D6RJB6 530 aa3.85□□□□□ -1.79
DEPDC4-206ENST00000549100 CLDN10P78369 228 aa3.85□□□□□ -1.79
DEPDC4-206ENST00000549100 USP17L24Q0WX57 530 aa3.85□□□□□ -1.79
DEPDC4-206ENST00000549100 PTK7Q13308 1070 aa3.85□□□□□ -1.79
DEPDC4-206ENST00000549100 TMEM164Q5U3C3 297 aa3.85□□□□□ -1.79
DEPDC4-206ENST00000549100 INTS5Q6P9B9 1019 aaKnown RBP3.85□□□□□ -1.79
DEPDC4-206ENST00000549100 NFXL1Q6ZNB6 911 aa3.85□□□□□ -1.79
DEPDC4-206ENST00000549100 FBXO11Q86XK2 927 aa3.85□□□□□ -1.79
DEPDC4-206ENST00000549100 ZNF295-AS1Q8N0V1 137 aa3.85□□□□□ -1.79
DEPDC4-206ENST00000549100 C1orf216Q8TAB5 229 aa3.85□□□□□ -1.79
DEPDC4-206ENST00000549100 ZNF592Q92610 1267 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms