RNA–Protein interactions for RNA: ENST00000548946.1

UBE2N-202, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3

Gene UBE2N, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-202ENST00000548946 IER5Q5VY09 327 aa9.15□□□□□ -0.94
UBE2N-202ENST00000548946 NOVA2Q9UNW9 492 aaKnown RBP9.15□□□□□ -0.94
UBE2N-202ENST00000548946 ADARB2-AS1A8MUL3 147 aa9.14□□□□□ -0.95
UBE2N-202ENST00000548946 TGFBR3LH3BV60 316 aa9.14□□□□□ -0.95
UBE2N-202ENST00000548946 TNFRSF25Q93038 417 aa9.13□□□□□ -0.95
UBE2N-202ENST00000548946 EFCC1Q9HA90 598 aa9.13□□□□□ -0.95
UBE2N-202ENST00000548946 GTF3C3Q9Y5Q9 886 aa9.13□□□□□ -0.95
UBE2N-202ENST00000548946 MSTNO14793 375 aa9.12□□□□□ -0.95
UBE2N-202ENST00000548946 COL8A1P27658 744 aa9.12□□□□□ -0.95
UBE2N-202ENST00000548946 ELOAQ14241 798 aaKnown RBP9.12□□□□□ -0.95
UBE2N-202ENST00000548946 SWI5Q1ZZU3 235 aa9.12□□□□□ -0.95
UBE2N-202ENST00000548946 SUV39H2Q9H5I1 410 aa9.12□□□□□ -0.95
UBE2N-202ENST00000548946 ACIN1Q9UKV3 1341 aaKnown RBP9.11□□□□□ -0.95
UBE2N-202ENST00000548946 EPB42P16452 691 aa9.11□□□□□ -0.95
UBE2N-202ENST00000548946 RAB44Q7Z6P3 723 aaPredicted RBP9.11□□□□□ -0.95
UBE2N-202ENST00000548946 BHMTQ93088 406 aa9.11□□□□□ -0.95
UBE2N-202ENST00000548946 CCDC97Q96F63 343 aaPredicted RBP9.11□□□□□ -0.95
UBE2N-202ENST00000548946 MDFIQ99750 246 aa9.11□□□□□ -0.95
UBE2N-202ENST00000548946 DGKZQ13574 1117 aa9.1□□□□□ -0.95
UBE2N-202ENST00000548946 KLK14Q9P0G3 267 aa9.1□□□□□ -0.95
UBE2N-202ENST00000548946 KRBA1A5PL33 1030 aa9.09□□□□□ -0.95
UBE2N-202ENST00000548946 ADH7P40394 386 aa9.09□□□□□ -0.95
UBE2N-202ENST00000548946 C11orf91Q3C1V1 193 aa9.09□□□□□ -0.95
UBE2N-202ENST00000548946 MYO19Q96H55 970 aa9.09□□□□□ -0.95
UBE2N-202ENST00000548946 PNMA5Q96PV4 448 aa9.09□□□□□ -0.95
UBE2N-202ENST00000548946 QTRT2Q9H974 415 aaKnown RBP9.09□□□□□ -0.95
UBE2N-202ENST00000548946 DMGDHQ9UI17 866 aaKnown RBP9.09□□□□□ -0.95
UBE2N-202ENST00000548946 SERPINA10Q9UK55 444 aa9.09□□□□□ -0.95
UBE2N-202ENST00000548946 BCS1LQ9Y276 419 aa9.09□□□□□ -0.95
UBE2N-202ENST00000548946 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.08□□□□□ -0.96
UBE2N-202ENST00000548946 LOC100996750A0A140TA64 210 aa9.08□□□□□ -0.96
UBE2N-202ENST00000548946 SPDYE3A6NKU9 549 aa9.08□□□□□ -0.96
UBE2N-202ENST00000548946 KRTAP4-6Q9BYQ5 205 aa9.08□□□□□ -0.96
UBE2N-202ENST00000548946 ATG7O95352 703 aa9.07□□□□□ -0.96
UBE2N-202ENST00000548946 IDH3AP50213 366 aa9.07□□□□□ -0.96
UBE2N-202ENST00000548946 SRPK2P78362 688 aaKnown RBP9.07□□□□□ -0.96
UBE2N-202ENST00000548946 CCINQ13939 588 aa9.07□□□□□ -0.96
UBE2N-202ENST00000548946 PRIMPOLQ96LW4 560 aa9.07□□□□□ -0.96
UBE2N-202ENST00000548946 SPOCK3Q9BQ16 436 aa9.07□□□□□ -0.96
UBE2N-202ENST00000548946 PLVAPQ9BX97 442 aa9.07□□□□□ -0.96
UBE2N-202ENST00000548946 GSX2Q9BZM3 304 aa9.07□□□□□ -0.96
UBE2N-202ENST00000548946 ZMIZ1Q9ULJ6 1067 aa9.07□□□□□ -0.96
UBE2N-202ENST00000548946 M0R082 166 aa9.06□□□□□ -0.96
UBE2N-202ENST00000548946 PRMT3O60678 531 aa9.06□□□□□ -0.96
UBE2N-202ENST00000548946 ITGB2P05107 769 aa9.06□□□□□ -0.96
UBE2N-202ENST00000548946 INPP5BP32019 993 aa9.06□□□□□ -0.96
UBE2N-202ENST00000548946 ARSDP51689 593 aa9.06□□□□□ -0.96
UBE2N-202ENST00000548946 ZNF417Q8TAU3 575 aa9.06□□□□□ -0.96
UBE2N-202ENST00000548946 ZNF587Q96SQ5 575 aaPredicted RBP9.06□□□□□ -0.96
UBE2N-202ENST00000548946 UBE2OQ9C0C9 1292 aaKnown RBP9.06□□□□□ -0.96
UBE2N-202ENST00000548946 IGFLR1Q9H665 355 aa9.06□□□□□ -0.96
UBE2N-202ENST00000548946 C11orf16Q9NQ32 467 aa9.06□□□□□ -0.96
UBE2N-202ENST00000548946 MICAL2O94851 1124 aa9.05□□□□□ -0.96
UBE2N-202ENST00000548946 TBC1D8BQ0IIM8 1120 aa9.05□□□□□ -0.96
UBE2N-202ENST00000548946 FKBP5Q13451 457 aaPredicted RBP9.05□□□□□ -0.96
UBE2N-202ENST00000548946 STK32AQ8WU08 396 aa9.05□□□□□ -0.96
UBE2N-202ENST00000548946 PBXIP1Q96AQ6 731 aa9.05□□□□□ -0.96
UBE2N-202ENST00000548946 TRIM11Q96F44 468 aa9.05□□□□□ -0.96
UBE2N-202ENST00000548946 IFT43Q96FT9 208 aa9.05□□□□□ -0.96
UBE2N-202ENST00000548946 PRDM6Q9NQX0 595 aa9.05□□□□□ -0.96
UBE2N-202ENST00000548946 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.05□□□□□ -0.96
UBE2N-202ENST00000548946 MICALL1Q8N3F8 863 aa9.04□□□□□ -0.96
UBE2N-202ENST00000548946 STARD13Q9Y3M8 1113 aa9.04□□□□□ -0.96
UBE2N-202ENST00000548946 ALBP02768 609 aa9.03□□□□□ -0.96
UBE2N-202ENST00000548946 FAM69CQ0P6D2 419 aa9.03□□□□□ -0.96
UBE2N-202ENST00000548946 OCLNQ16625 522 aa9.03□□□□□ -0.96
UBE2N-202ENST00000548946 LRFN2Q9ULH4 789 aa9.03□□□□□ -0.96
UBE2N-202ENST00000548946 PROCP04070 461 aa9.02□□□□□ -0.97
UBE2N-202ENST00000548946 SPATA31C1P0DKV0 1188 aa9.02□□□□□ -0.97
UBE2N-202ENST00000548946 NFKB1P19838 968 aa9.02□□□□□ -0.97
UBE2N-202ENST00000548946 SUZ12Q15022 739 aaKnown RBP9.02□□□□□ -0.97
UBE2N-202ENST00000548946 PCSK7Q16549 785 aa9.02□□□□□ -0.97
UBE2N-202ENST00000548946 PRRT3Q5FWE3 981 aa9.02□□□□□ -0.97
UBE2N-202ENST00000548946 SLC6A14Q9UN76 642 aa9.02□□□□□ -0.97
UBE2N-202ENST00000548946 LILRB5O75023 590 aa9.01□□□□□ -0.97
UBE2N-202ENST00000548946 COX20Q5RI15 118 aa9.01□□□□□ -0.97
UBE2N-202ENST00000548946 TMEM164Q5U3C3 297 aa9.01□□□□□ -0.97
UBE2N-202ENST00000548946 C20orf204Q6ZNR8 217 aa9.01□□□□□ -0.97
UBE2N-202ENST00000548946 COL26A1Q96A83 441 aa9.01□□□□□ -0.97
UBE2N-202ENST00000548946 DNAJB12Q9NXW2 375 aaKnown RBP9.01□□□□□ -0.97
UBE2N-202ENST00000548946 ARID3CA6NKF2 412 aa9□□□□□ -0.97
UBE2N-202ENST00000548946 C1QTNF9BB2RNN3 333 aa9□□□□□ -0.97
UBE2N-202ENST00000548946 PTCD1O75127 700 aaKnown RBP9□□□□□ -0.97
UBE2N-202ENST00000548946 C16orf46Q6P387 395 aa9□□□□□ -0.97
UBE2N-202ENST00000548946 TREML1Q86YW5 311 aa9□□□□□ -0.97
UBE2N-202ENST00000548946 CXXC1Q9P0U4 656 aaPredicted RBP9□□□□□ -0.97
UBE2N-202ENST00000548946 RTCBQ9Y3I0 505 aaKnown RBP9□□□□□ -0.97
UBE2N-202ENST00000548946 OPLAHO14841 1288 aa8.99□□□□□ -0.97
UBE2N-202ENST00000548946 MAP3K6O95382 1288 aa8.99□□□□□ -0.97
UBE2N-202ENST00000548946 BRD2P25440 801 aaKnown RBP8.99□□□□□ -0.97
UBE2N-202ENST00000548946 GRNP28799 593 aaKnown RBP8.99□□□□□ -0.97
UBE2N-202ENST00000548946 CD163Q86VB7 1156 aa8.99□□□□□ -0.97
UBE2N-202ENST00000548946 CLP1Q92989 425 aaKnown RBP8.99□□□□□ -0.97
UBE2N-202ENST00000548946 ARID4AP29374 1257 aaPredicted RBP8.98□□□□□ -0.97
UBE2N-202ENST00000548946 TRIM28Q13263 835 aaKnown RBP8.98□□□□□ -0.97
UBE2N-202ENST00000548946 COL9A3Q14050 684 aaPredicted RBP8.98□□□□□ -0.97
UBE2N-202ENST00000548946 C8orf86Q6ZUL3 223 aa8.98□□□□□ -0.97
UBE2N-202ENST00000548946 KRT25Q7Z3Z0 450 aa8.98□□□□□ -0.97
UBE2N-202ENST00000548946 JPH1Q9HDC5 661 aaPredicted RBP8.98□□□□□ -0.97
UBE2N-202ENST00000548946 SASH3O75995 380 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms