RNA–Protein interactions for RNA: ENST00000548598.5

RACGAP1-213, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-213ENST00000548598 LAMB2P55268 1798 aa22.04■■□□□ 1.12
RACGAP1-213ENST00000548598 RNF123Q5XPI4 1314 aa22.04■■□□□ 1.12
RACGAP1-213ENST00000548598 ZNF316A6NFI3 1004 aaPredicted RBP22.03■■□□□ 1.12
RACGAP1-213ENST00000548598 HOXA10P31260 410 aaPredicted RBP22.03■■□□□ 1.12
RACGAP1-213ENST00000548598 HSP90AB3PQ58FF7 597 aa22.03■■□□□ 1.12
RACGAP1-213ENST00000548598 RRAGCQ9HB90 399 aa22.03■■□□□ 1.12
RACGAP1-213ENST00000548598 CALD1Q05682 793 aaKnown RBP22.02■■□□□ 1.12
RACGAP1-213ENST00000548598 FKBP4Q02790 459 aaKnown RBP eCLIP22.01■■□□□ 1.11
RACGAP1-213ENST00000548598 DUSP27Q5VZP5 1158 aa22.01■■□□□ 1.11
RACGAP1-213ENST00000548598 DBF4Q9UBU7 674 aaPredicted RBP22.01■■□□□ 1.11
RACGAP1-213ENST00000548598 GNAI1P63096 354 aa22■■□□□ 1.11
RACGAP1-213ENST00000548598 AIMP1Q12904 312 aaKnown RBP22■■□□□ 1.11
RACGAP1-213ENST00000548598 OLFM4Q6UX06 510 aa22■■□□□ 1.11
RACGAP1-213ENST00000548598 C16orf71Q8IYS4 520 aaPredicted RBP22■■□□□ 1.11
RACGAP1-213ENST00000548598 UTP14AQ9BVJ6 771 aaKnown RBP22■■□□□ 1.11
RACGAP1-213ENST00000548598 FSTL1Q12841 308 aa21.99■■□□□ 1.11
RACGAP1-213ENST00000548598 TCIRG1Q13488 830 aa21.99■■□□□ 1.11
RACGAP1-213ENST00000548598 SLC10A5Q5PT55 438 aa21.99■■□□□ 1.11
RACGAP1-213ENST00000548598 C3orf67Q6ZVT6 689 aa21.99■■□□□ 1.11
RACGAP1-213ENST00000548598 NLRP10Q86W26 655 aa21.99■■□□□ 1.11
RACGAP1-213ENST00000548598 RTKN2Q8IZC4 609 aa21.99■■□□□ 1.11
RACGAP1-213ENST00000548598 DDX60Q8IY21 1712 aaKnown RBP21.98■■□□□ 1.11
RACGAP1-213ENST00000548598 POTECB2RU33 542 aa21.98■■□□□ 1.11
RACGAP1-213ENST00000548598 RPGRQ92834 1020 aaKnown RBP21.98■■□□□ 1.11
RACGAP1-213ENST00000548598 CRAMP1Q96RY5 1269 aa21.98■■□□□ 1.11
RACGAP1-213ENST00000548598 VEGFAP15692 232 aaPredicted RBP21.97■■□□□ 1.11
RACGAP1-213ENST00000548598 CCDC27Q2M243 656 aa21.97■■□□□ 1.11
RACGAP1-213ENST00000548598 CC2D2BQ6DHV5 1058 aa21.97■■□□□ 1.11
RACGAP1-213ENST00000548598 DPY19L2Q6NUT2 758 aa21.97■■□□□ 1.11
RACGAP1-213ENST00000548598 PLBD2Q8NHP8 589 aa21.97■■□□□ 1.11
RACGAP1-213ENST00000548598 PSMD1Q99460 953 aa21.97■■□□□ 1.11
RACGAP1-213ENST00000548598 HYPKQ9NX55 129 aa21.97■■□□□ 1.11
RACGAP1-213ENST00000548598 APLP1P51693 650 aa21.96■■□□□ 1.11
RACGAP1-213ENST00000548598 NCBP3Q53F19 620 aaKnown RBP21.96■■□□□ 1.11
RACGAP1-213ENST00000548598 NLRP3Q96P20 1036 aa21.96■■□□□ 1.11
RACGAP1-213ENST00000548598 RBM17Q96I25 401 aaKnown RBP21.95■■□□□ 1.1
RACGAP1-213ENST00000548598 ZNF277Q9NRM2 450 aaPredicted RBP21.95■■□□□ 1.1
RACGAP1-213ENST00000548598 SCN4AP35499 1836 aa21.94■■□□□ 1.1
RACGAP1-213ENST00000548598 ANKRD13DQ6ZTN6 518 aa21.94■■□□□ 1.1
RACGAP1-213ENST00000548598 ISCA1Q9BUE6 129 aa21.94■■□□□ 1.1
RACGAP1-213ENST00000548598 ABCC4O15439 1325 aa21.93■■□□□ 1.1
RACGAP1-213ENST00000548598 ANP32CO43423 234 aa21.93■■□□□ 1.1
RACGAP1-213ENST00000548598 COL4A5P29400 1685 aa21.93■■□□□ 1.1
RACGAP1-213ENST00000548598 GRIPAP1Q4V328 841 aa21.93■■□□□ 1.1
RACGAP1-213ENST00000548598 SMC1BQ8NDV3 1235 aa21.93■■□□□ 1.1
RACGAP1-213ENST00000548598 SH3TC1Q8TE82 1336 aa21.93■■□□□ 1.1
RACGAP1-213ENST00000548598 PPEF1O14829 653 aaPredicted RBP21.92■■□□□ 1.1
RACGAP1-213ENST00000548598 IARSP41252 1262 aaKnown RBP21.92■■□□□ 1.1
RACGAP1-213ENST00000548598 L3MBTL3Q96JM7 780 aaPredicted RBP21.92■■□□□ 1.1
RACGAP1-213ENST00000548598 MRS2Q9HD23 443 aa21.92■■□□□ 1.1
RACGAP1-213ENST00000548598 TRMT112Q9UI30 125 aaKnown RBP21.92■■□□□ 1.1
RACGAP1-213ENST00000548598 DDNO94850 711 aaPredicted RBP21.91■■□□□ 1.1
RACGAP1-213ENST00000548598 SLC51AQ86UW1 340 aa21.91■■□□□ 1.1
RACGAP1-213ENST00000548598 WWC1Q8IX03 1113 aa21.91■■□□□ 1.1
RACGAP1-213ENST00000548598 SYNE4Q8N205 404 aa21.91■■□□□ 1.1
RACGAP1-213ENST00000548598 C8orf58Q8NAV2 365 aa21.91■■□□□ 1.1
RACGAP1-213ENST00000548598 LRRC37AA6NMS7 1700 aa21.91■■□□□ 1.1
RACGAP1-213ENST00000548598 ZNF541Q9H0D2 1346 aa21.9■■□□□ 1.1
RACGAP1-213ENST00000548598 FZD9O00144 591 aa21.9■■□□□ 1.1
RACGAP1-213ENST00000548598 TRIM28Q13263 835 aaKnown RBP21.9■■□□□ 1.1
RACGAP1-213ENST00000548598 ELL2O00472 640 aaPredicted RBP21.89■■□□□ 1.09
RACGAP1-213ENST00000548598 HCLS1P14317 486 aaPredicted RBP21.89■■□□□ 1.09
RACGAP1-213ENST00000548598 TAF1P21675 1872 aa21.88■■□□□ 1.09
RACGAP1-213ENST00000548598 IL16Q14005 1332 aa21.88■■□□□ 1.09
RACGAP1-213ENST00000548598 PHAXQ9H814 394 aaKnown RBP21.88■■□□□ 1.09
RACGAP1-213ENST00000548598 ATP6V0A2Q9Y487 856 aa21.88■■□□□ 1.09
RACGAP1-213ENST00000548598 ADAMTSL1Q8N6G6 1762 aa21.87■■□□□ 1.09
RACGAP1-213ENST00000548598 DNAJC5GQ8N7S2 189 aa21.87■■□□□ 1.09
RACGAP1-213ENST00000548598 TSPYL6Q8N831 410 aa21.87■■□□□ 1.09
RACGAP1-213ENST00000548598 TSR2Q969E8 191 aaKnown RBP21.87■■□□□ 1.09
RACGAP1-213ENST00000548598 CHMP4AQ9BY43 222 aa21.87■■□□□ 1.09
RACGAP1-213ENST00000548598 ATP5J2-PTCD1G3V325 749 aa21.86■■□□□ 1.09
RACGAP1-213ENST00000548598 GOLGA2Q08379 1002 aa21.86■■□□□ 1.09
RACGAP1-213ENST00000548598 CCDC30Q5VVM6 783 aa21.86■■□□□ 1.09
RACGAP1-213ENST00000548598 IQCA1LA6NCM1 817 aa21.85■■□□□ 1.09
RACGAP1-213ENST00000548598 BBOX1O75936 387 aa21.85■■□□□ 1.09
RACGAP1-213ENST00000548598 GRAPQ13588 217 aa21.85■■□□□ 1.09
RACGAP1-213ENST00000548598 GRAPLQ8TC17 118 aaPredicted RBP21.85■■□□□ 1.09
RACGAP1-213ENST00000548598 DUOX1Q9NRD9 1551 aa21.85■■□□□ 1.09
RACGAP1-213ENST00000548598 SF3B3Q15393 1217 aaKnown RBP21.84■■□□□ 1.09
RACGAP1-213ENST00000548598 RIC3Q7Z5B4 369 aa21.84■■□□□ 1.09
RACGAP1-213ENST00000548598 FAM89AQ96GI7 184 aa21.84■■□□□ 1.09
RACGAP1-213ENST00000548598 RTFDC1Q9BY42 306 aaPredicted RBP21.84■■□□□ 1.09
RACGAP1-213ENST00000548598 COL4A1P02462 1669 aa21.84■■□□□ 1.09
RACGAP1-213ENST00000548598 DDX46Q7L014 1031 aaKnown RBP21.83■■□□□ 1.09
RACGAP1-213ENST00000548598 GPC2Q8N158 579 aa21.83■■□□□ 1.09
RACGAP1-213ENST00000548598 JDP2Q8WYK2 163 aa21.83■■□□□ 1.09
RACGAP1-213ENST00000548598 VPS33BQ9H267 617 aa21.83■■□□□ 1.09
RACGAP1-213ENST00000548598 LTBP1Q14766 1721 aa21.83■■□□□ 1.08
RACGAP1-213ENST00000548598 TCERG1O14776 1098 aaKnown RBP21.82■■□□□ 1.08
RACGAP1-213ENST00000548598 POTEIP0CG38 1075 aa21.82■■□□□ 1.08
RACGAP1-213ENST00000548598 POTEJP0CG39 1038 aa21.82■■□□□ 1.08
RACGAP1-213ENST00000548598 SP8Q8IXZ3 490 aa21.82■■□□□ 1.08
RACGAP1-213ENST00000548598 ZNF428Q96B54 188 aa21.82■■□□□ 1.08
RACGAP1-213ENST00000548598 TAF1DQ9H5J8 278 aaPredicted RBP21.82■■□□□ 1.08
RACGAP1-213ENST00000548598 PCNTO95613 3336 aa21.82■■□□□ 1.08
RACGAP1-213ENST00000548598 CACNA1FO60840 1977 aa21.81■■□□□ 1.08
RACGAP1-213ENST00000548598 HTRA3P83110 453 aa21.81■■□□□ 1.08
RACGAP1-213ENST00000548598 TMC4Q7Z404 712 aa21.81■■□□□ 1.08
RACGAP1-213ENST00000548598 LARGE2Q8N3Y3 721 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms