RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 CHPF2Q9P2E5 772 aa6.47□□□□□ -1.37
APP-217ENST00000548570 TNNQ9UQP3 1299 aa6.47□□□□□ -1.37
APP-217ENST00000548570 SOS1Q07889 1333 aaPredicted RBP6.47□□□□□ -1.37
APP-217ENST00000548570 CNTNAP4Q9C0A0 1308 aa6.47□□□□□ -1.37
APP-217ENST00000548570 UBR2Q8IWV8 1755 aa6.46□□□□□ -1.37
APP-217ENST00000548570 BTAF1O14981 1849 aa6.46□□□□□ -1.37
APP-217ENST00000548570 BAG6P46379 1132 aa6.46□□□□□ -1.38
APP-217ENST00000548570 TJP1Q07157 1748 aa6.46□□□□□ -1.38
APP-217ENST00000548570 RC3H1Q5TC82 1133 aaKnown RBP6.46□□□□□ -1.38
APP-217ENST00000548570 TTLL7Q6ZT98 887 aa6.46□□□□□ -1.38
APP-217ENST00000548570 BCL2L13Q9BXK5 485 aa6.46□□□□□ -1.38
APP-217ENST00000548570 BCL2L12Q9HB09 334 aa6.46□□□□□ -1.38
APP-217ENST00000548570 CCDC87Q9NVE4 849 aa6.46□□□□□ -1.38
APP-217ENST00000548570 CICQ96RK0 1608 aaPredicted RBP6.46□□□□□ -1.38
APP-217ENST00000548570 SBF2Q86WG5 1849 aa6.46□□□□□ -1.38
APP-217ENST00000548570 RPS6KA4O75676 772 aa6.45□□□□□ -1.38
APP-217ENST00000548570 CT47B1P0C2W7 299 aaPredicted RBP6.45□□□□□ -1.38
APP-217ENST00000548570 CANXP27824 592 aaKnown RBP6.45□□□□□ -1.38
APP-217ENST00000548570 BRPF1P55201 1214 aaPredicted RBP6.45□□□□□ -1.38
APP-217ENST00000548570 TEX13AQ9BXU3 409 aaPredicted RBP6.45□□□□□ -1.38
APP-217ENST00000548570 DDX21Q9NR30 783 aaKnown RBP eCLIP6.45□□□□□ -1.38
APP-217ENST00000548570 ITGB4P16144 1822 aa6.45□□□□□ -1.38
APP-217ENST00000548570 PNPLA7Q6ZV29 1317 aa6.45□□□□□ -1.38
APP-217ENST00000548570 SOCS7O14512 581 aa6.44□□□□□ -1.38
APP-217ENST00000548570 GNPATO15228 680 aa6.44□□□□□ -1.38
APP-217ENST00000548570 TBC1D12O60347 775 aa6.44□□□□□ -1.38
APP-217ENST00000548570 CAMTA2O94983 1202 aa6.44□□□□□ -1.38
APP-217ENST00000548570 STARD3NLO95772 234 aa6.44□□□□□ -1.38
APP-217ENST00000548570 MYL6BP14649 208 aa6.44□□□□□ -1.38
APP-217ENST00000548570 IL6STP40189 918 aaPredicted RBP6.44□□□□□ -1.38
APP-217ENST00000548570 SLC15A2Q16348 729 aa6.44□□□□□ -1.38
APP-217ENST00000548570 HLFQ16534 295 aa6.44□□□□□ -1.38
APP-217ENST00000548570 ALDH1L2Q3SY69 923 aa6.44□□□□□ -1.38
APP-217ENST00000548570 PPP4R3BQ5MIZ7 849 aa6.44□□□□□ -1.38
APP-217ENST00000548570 COPS6Q7L5N1 327 aa6.44□□□□□ -1.38
APP-217ENST00000548570 COL23A1Q86Y22 540 aaPredicted RBP6.44□□□□□ -1.38
APP-217ENST00000548570 XAGE3Q8WTP9 111 aa6.44□□□□□ -1.38
APP-217ENST00000548570 ARHGEF1Q92888 912 aaKnown RBP6.44□□□□□ -1.38
APP-217ENST00000548570 DBF4Q9UBU7 674 aaPredicted RBP6.44□□□□□ -1.38
APP-217ENST00000548570 SRP68Q9UHB9 627 aaKnown RBP6.44□□□□□ -1.38
APP-217ENST00000548570 C5P01031 1676 aa6.44□□□□□ -1.38
APP-217ENST00000548570 RREB1Q92766 1687 aa6.44□□□□□ -1.38
APP-217ENST00000548570 LY75O60449 1722 aa6.44□□□□□ -1.38
APP-217ENST00000548570 ERBB4Q15303 1308 aa6.44□□□□□ -1.38
APP-217ENST00000548570 RNF123Q5XPI4 1314 aa6.44□□□□□ -1.38
APP-217ENST00000548570 ADCY9O60503 1353 aa6.44□□□□□ -1.38
APP-217ENST00000548570 ZNF831Q5JPB2 1677 aa6.43□□□□□ -1.38
APP-217ENST00000548570 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.43□□□□□ -1.38
APP-217ENST00000548570 PLIN1O60240 522 aa6.43□□□□□ -1.38
APP-217ENST00000548570 SF3B2Q13435 895 aaKnown RBP6.43□□□□□ -1.38
APP-217ENST00000548570 C20orf194Q5TEA3 1177 aa6.43□□□□□ -1.38
APP-217ENST00000548570 CCDC30Q5VVM6 783 aa6.43□□□□□ -1.38
APP-217ENST00000548570 ZNF428Q96B54 188 aa6.43□□□□□ -1.38
APP-217ENST00000548570 RCAN3Q9UKA8 241 aa6.43□□□□□ -1.38
APP-217ENST00000548570 NOB1Q9ULX3 412 aaKnown RBP6.43□□□□□ -1.38
APP-217ENST00000548570 TBC1D2BQ9UPU7 963 aa6.43□□□□□ -1.38
APP-217ENST00000548570 COL15A1P39059 1388 aa6.43□□□□□ -1.38
APP-217ENST00000548570 C4BP0C0L5 1744 aa6.42□□□□□ -1.38
APP-217ENST00000548570 F6X3S4 739 aa6.42□□□□□ -1.38
APP-217ENST00000548570 PHF14O94880 888 aa6.42□□□□□ -1.38
APP-217ENST00000548570 IGKV5-2P06315 115 aa6.42□□□□□ -1.38
APP-217ENST00000548570 RLBP1P12271 317 aa6.42□□□□□ -1.38
APP-217ENST00000548570 TRIM27P14373 513 aa6.42□□□□□ -1.38
APP-217ENST00000548570 SSFA2P28290 1259 aa6.42□□□□□ -1.38
APP-217ENST00000548570 AIMP1Q12904 312 aaKnown RBP6.42□□□□□ -1.38
APP-217ENST00000548570 FLIIQ13045 1269 aa6.42□□□□□ -1.38
APP-217ENST00000548570 TPRNQ4KMQ1 711 aa6.42□□□□□ -1.38
APP-217ENST00000548570 POTEEQ6S8J3 1075 aa6.42□□□□□ -1.38
APP-217ENST00000548570 AK7Q96M32 723 aa6.42□□□□□ -1.38
APP-217ENST00000548570 SMC4Q9NTJ3 1288 aa6.42□□□□□ -1.38
APP-217ENST00000548570 HYPKQ9NX55 129 aa6.42□□□□□ -1.38
APP-217ENST00000548570 USP42Q9H9J4 1324 aaKnown RBP6.42□□□□□ -1.38
APP-217ENST00000548570 COL5A3P25940 1745 aaPredicted RBP6.42□□□□□ -1.38
APP-217ENST00000548570 RGPD3A6NKT7 1758 aaPredicted RBP6.41□□□□□ -1.38
APP-217ENST00000548570 RGPD4Q7Z3J3 1758 aa6.41□□□□□ -1.38
APP-217ENST00000548570 PI4KAP2A4QPH2 592 aa6.41□□□□□ -1.38
APP-217ENST00000548570 ECM2O94769 699 aaPredicted RBP6.41□□□□□ -1.38
APP-217ENST00000548570 GYS1P13807 737 aa6.41□□□□□ -1.38
APP-217ENST00000548570 R3HDM1Q15032 1099 aaKnown RBP6.41□□□□□ -1.38
APP-217ENST00000548570 TRAPPC3LQ5T215 181 aa6.41□□□□□ -1.38
APP-217ENST00000548570 BEND3Q5T5X7 828 aa6.41□□□□□ -1.38
APP-217ENST00000548570 USPL1Q5W0Q7 1092 aa6.41□□□□□ -1.38
APP-217ENST00000548570 DZIP3Q86Y13 1208 aaKnown RBP6.41□□□□□ -1.38
APP-217ENST00000548570 PI4KAP1Q8N8J0 262 aa6.41□□□□□ -1.38
APP-217ENST00000548570 KCTD12Q96CX2 325 aaKnown RBP6.41□□□□□ -1.38
APP-217ENST00000548570 ZBTB3Q9H5J0 574 aa6.41□□□□□ -1.38
APP-217ENST00000548570 STK32BQ9NY57 414 aa6.41□□□□□ -1.38
APP-217ENST00000548570 TFCP2L1Q9NZI6 479 aa6.41□□□□□ -1.38
APP-217ENST00000548570 NARFQ9UHQ1 456 aa6.41□□□□□ -1.38
APP-217ENST00000548570 RTCBQ9Y3I0 505 aaKnown RBP6.41□□□□□ -1.38
APP-217ENST00000548570 MAP3K15Q6ZN16 1313 aa6.41□□□□□ -1.38
APP-217ENST00000548570 UBN2Q6ZU65 1347 aa6.41□□□□□ -1.38
APP-217ENST00000548570 NUP188Q5SRE5 1749 aa6.41□□□□□ -1.38
APP-217ENST00000548570 ERVV-1B6SEH8 477 aa6.4□□□□□ -1.38
APP-217ENST00000548570 RGS20O76081 388 aa6.4□□□□□ -1.38
APP-217ENST00000548570 TM4SF1P30408 202 aa6.4□□□□□ -1.38
APP-217ENST00000548570 DDR1Q08345 913 aa6.4□□□□□ -1.38
APP-217ENST00000548570 TBC1D9BQ66K14 1250 aa6.4□□□□□ -1.38
APP-217ENST00000548570 KSR2Q6VAB6 950 aa6.4□□□□□ -1.38
APP-217ENST00000548570 HOMEZQ8IX15 550 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms