RNA–Protein interactions for RNA: ENST00000548387.1

ACSS3-205, Transcript of acyl-CoA synthetase short chain family member 3, human

TSL 2

Gene ACSS3, Length 741 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSS3-205	ENST00000548387	EVI5	O60447	810 aa		10.87	□□□□□ -0.67
ACSS3-205	ENST00000548387	YBX3	P16989	372 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
ACSS3-205	ENST00000548387	MTHFS	P49914	203 aa		10.87	□□□□□ -0.67
ACSS3-205	ENST00000548387	CABP4	P57796	275 aa		10.87	□□□□□ -0.67
ACSS3-205	ENST00000548387	FAM161A	Q3B820	660 aa		10.87	□□□□□ -0.67
ACSS3-205	ENST00000548387	C1orf141	Q5JVX7	400 aa		10.87	□□□□□ -0.67
ACSS3-205	ENST00000548387	RC3H1	Q5TC82	1133 aa	Known RBP	10.87	□□□□□ -0.67
ACSS3-205	ENST00000548387	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	10.87	□□□□□ -0.67
ACSS3-205	ENST00000548387	SLC4A9	Q96Q91	983 aa		10.87	□□□□□ -0.67
ACSS3-205	ENST00000548387	GOLGB1	Q14789	3259 aa	Known RBP	10.87	□□□□□ -0.67
ACSS3-205	ENST00000548387	COL5A3	P25940	1745 aa	Predicted RBP	10.87	□□□□□ -0.67
ACSS3-205	ENST00000548387	CNTNAP4	Q9C0A0	1308 aa		10.86	□□□□□ -0.67
ACSS3-205	ENST00000548387	PALM3	A6NDB9	673 aa	Predicted RBP	10.86	□□□□□ -0.67
ACSS3-205	ENST00000548387	SMIM5	Q71RC9	77 aa		10.86	□□□□□ -0.67
ACSS3-205	ENST00000548387	RTCB	Q9Y3I0	505 aa	Known RBP	10.86	□□□□□ -0.67
ACSS3-205	ENST00000548387	NPC1L1	Q9UHC9	1359 aa		10.86	□□□□□ -0.67
ACSS3-205	ENST00000548387	CIC	Q96RK0	1608 aa	Predicted RBP	10.85	□□□□□ -0.67
ACSS3-205	ENST00000548387	MRRF	Q96E11	262 aa	Known RBP	10.85	□□□□□ -0.67
ACSS3-205	ENST00000548387	SPTLC1	O15269	473 aa		10.84	□□□□□ -0.67
ACSS3-205	ENST00000548387	RPS6KA4	O75676	772 aa		10.84	□□□□□ -0.67
ACSS3-205	ENST00000548387	USP17L8	P0C7I0	530 aa		10.84	□□□□□ -0.67
ACSS3-205	ENST00000548387	PRKAR2A	P13861	404 aa	Known RBP	10.84	□□□□□ -0.67
ACSS3-205	ENST00000548387	AKAP4	Q5JQC9	854 aa		10.84	□□□□□ -0.67
ACSS3-205	ENST00000548387	TRAPPC3L	Q5T215	181 aa		10.84	□□□□□ -0.67
ACSS3-205	ENST00000548387	NFATC2IP	Q8NCF5	419 aa		10.84	□□□□□ -0.67
ACSS3-205	ENST00000548387	PXYLP1	Q8TE99	480 aa		10.84	□□□□□ -0.67
ACSS3-205	ENST00000548387	SPIRE2	Q8WWL2	714 aa		10.84	□□□□□ -0.67
ACSS3-205	ENST00000548387	PHF12	Q96QT6	1004 aa		10.84	□□□□□ -0.67
ACSS3-205	ENST00000548387	UCN2	Q96RP3	112 aa		10.84	□□□□□ -0.67
ACSS3-205	ENST00000548387	SCN11A	Q9UI33	1791 aa		10.84	□□□□□ -0.67
ACSS3-205	ENST00000548387	ZNF710	Q8N1W2	664 aa		10.83	□□□□□ -0.68
ACSS3-205	ENST00000548387	NLGN1	Q8N2Q7	840 aa		10.83	□□□□□ -0.68
ACSS3-205	ENST00000548387	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	10.83	□□□□□ -0.68
ACSS3-205	ENST00000548387	NDUFB9	Q9Y6M9	179 aa		10.83	□□□□□ -0.68
ACSS3-205	ENST00000548387	MRC1	P22897	1456 aa		10.82	□□□□□ -0.68
ACSS3-205	ENST00000548387	DIAPH1	O60610	1272 aa	Known RBP	10.82	□□□□□ -0.68
ACSS3-205	ENST00000548387	PTCD1	O75127	700 aa	Known RBP	10.82	□□□□□ -0.68
ACSS3-205	ENST00000548387	OAT	P04181	439 aa		10.82	□□□□□ -0.68
ACSS3-205	ENST00000548387	MMP10	P09238	476 aa		10.82	□□□□□ -0.68
ACSS3-205	ENST00000548387	LMOD1	P29536	600 aa	Predicted RBP	10.82	□□□□□ -0.68
ACSS3-205	ENST00000548387	QPCT	Q16769	361 aa		10.82	□□□□□ -0.68
ACSS3-205	ENST00000548387	NOM1	Q5C9Z4	860 aa	Known RBP	10.82	□□□□□ -0.68
ACSS3-205	ENST00000548387	CC2D1B	Q5T0F9	858 aa	Known RBP	10.82	□□□□□ -0.68
ACSS3-205	ENST00000548387	RSBN1L	Q6PCB5	846 aa	Predicted RBP	10.82	□□□□□ -0.68
ACSS3-205	ENST00000548387	ALG2	Q9H553	416 aa		10.82	□□□□□ -0.68
ACSS3-205	ENST00000548387	ADAMTS7	Q9UKP4	1686 aa		10.82	□□□□□ -0.68
ACSS3-205	ENST00000548387	KIF13B	Q9NQT8	1826 aa		10.81	□□□□□ -0.68
ACSS3-205	ENST00000548387	LILRB3	O75022	631 aa		10.81	□□□□□ -0.68
ACSS3-205	ENST00000548387	AP1G2	O75843	785 aa		10.81	□□□□□ -0.68
ACSS3-205	ENST00000548387	GYS1	P13807	737 aa		10.81	□□□□□ -0.68
ACSS3-205	ENST00000548387	RFC4	P35249	363 aa		10.81	□□□□□ -0.68
ACSS3-205	ENST00000548387	CRKL	P46109	303 aa	Known RBP	10.81	□□□□□ -0.68
ACSS3-205	ENST00000548387	WASHC4	Q2M389	1173 aa		10.81	□□□□□ -0.68
ACSS3-205	ENST00000548387	SLC52A2	Q9HAB3	445 aa		10.81	□□□□□ -0.68
ACSS3-205	ENST00000548387	C4A	P0C0L4	1744 aa		10.81	□□□□□ -0.68
ACSS3-205	ENST00000548387	TJP1	Q07157	1748 aa		10.81	□□□□□ -0.68
ACSS3-205	ENST00000548387	COL3A1	P02461	1466 aa	Predicted RBP	10.81	□□□□□ -0.68
ACSS3-205	ENST00000548387	MYH14	Q7Z406	1995 aa	Known RBP	10.8	□□□□□ -0.68
ACSS3-205	ENST00000548387	HMOX1	P09601	288 aa		10.8	□□□□□ -0.68
ACSS3-205	ENST00000548387	C1QTNF8	P60827	252 aa		10.8	□□□□□ -0.68
ACSS3-205	ENST00000548387	TGFB2	P61812	414 aa		10.8	□□□□□ -0.68
ACSS3-205	ENST00000548387	ADGRG1	Q9Y653	693 aa		10.8	□□□□□ -0.68
ACSS3-205	ENST00000548387	ADCY9	O60503	1353 aa		10.79	□□□□□ -0.68
ACSS3-205	ENST00000548387	KIAA1551	Q9HCM1	1747 aa		10.79	□□□□□ -0.68
ACSS3-205	ENST00000548387	C10orf71	Q711Q0	1435 aa		10.79	□□□□□ -0.68
ACSS3-205	ENST00000548387	RNMT	O43148	476 aa	Known RBP	10.79	□□□□□ -0.68
ACSS3-205	ENST00000548387	ZNF16	P17020	682 aa	Predicted RBP	10.79	□□□□□ -0.68
ACSS3-205	ENST00000548387	MTHFSD	Q2M296	383 aa	Known RBP	10.79	□□□□□ -0.68
ACSS3-205	ENST00000548387	LGR6	Q9HBX8	967 aa		10.79	□□□□□ -0.68
ACSS3-205	ENST00000548387	PXDNL	A1KZ92	1463 aa		10.79	□□□□□ -0.68
ACSS3-205	ENST00000548387	MAP3K7	O43318	606 aa		10.78	□□□□□ -0.68
ACSS3-205	ENST00000548387	GIGYF1	O75420	1035 aa	Predicted RBP	10.78	□□□□□ -0.68
ACSS3-205	ENST00000548387	ERCC3	P19447	782 aa		10.78	□□□□□ -0.68
ACSS3-205	ENST00000548387	TSR1	Q2NL82	804 aa	Known RBP	10.78	□□□□□ -0.68
ACSS3-205	ENST00000548387	INTS5	Q6P9B9	1019 aa	Known RBP	10.78	□□□□□ -0.68
ACSS3-205	ENST00000548387	PDCD7	Q8N8D1	485 aa	Known RBP	10.78	□□□□□ -0.68
ACSS3-205	ENST00000548387	CCDC87	Q9NVE4	849 aa		10.78	□□□□□ -0.68
ACSS3-205	ENST00000548387	USP42	Q9H9J4	1324 aa	Known RBP	10.78	□□□□□ -0.68
ACSS3-205	ENST00000548387	KCP	Q6ZWJ8	1503 aa		10.78	□□□□□ -0.68
ACSS3-205	ENST00000548387	RTL5	Q5HYW3	569 aa	Predicted RBP	10.77	□□□□□ -0.69
ACSS3-205	ENST00000548387	B4GALNT3	Q6L9W6	998 aa		10.77	□□□□□ -0.69
ACSS3-205	ENST00000548387	TFIP11	Q9UBB9	837 aa	Known RBP	10.77	□□□□□ -0.69
ACSS3-205	ENST00000548387	PARP3	Q9Y6F1	533 aa		10.77	□□□□□ -0.69
ACSS3-205	ENST00000548387	VIRMA	Q69YN4	1812 aa	Known RBP	10.77	□□□□□ -0.69
ACSS3-205	ENST00000548387	ATP10D	Q9P241	1426 aa		10.76	□□□□□ -0.69
ACSS3-205	ENST00000548387	CYP19A1	P11511	503 aa	Predicted RBP	10.76	□□□□□ -0.69
ACSS3-205	ENST00000548387	TCF3	P15923	654 aa		10.76	□□□□□ -0.69
ACSS3-205	ENST00000548387	VAC14	Q08AM6	782 aa		10.76	□□□□□ -0.69
ACSS3-205	ENST00000548387	PHLDB3	Q6NSJ2	640 aa		10.76	□□□□□ -0.69
ACSS3-205	ENST00000548387	DNAJC10	Q8IXB1	793 aa		10.76	□□□□□ -0.69
ACSS3-205	ENST00000548387	EPAS1	Q99814	870 aa		10.76	□□□□□ -0.69
ACSS3-205	ENST00000548387	MAFB	Q9Y5Q3	323 aa	Predicted RBP	10.76	□□□□□ -0.69
ACSS3-205	ENST00000548387	SOS1	Q07889	1333 aa	Predicted RBP	10.76	□□□□□ -0.69
ACSS3-205	ENST00000548387	UBR2	Q8IWV8	1755 aa		10.75	□□□□□ -0.69
ACSS3-205	ENST00000548387	TTLL13P	A6NNM8	815 aa		10.75	□□□□□ -0.69
ACSS3-205	ENST00000548387	SLC39A6	Q13433	755 aa		10.75	□□□□□ -0.69
ACSS3-205	ENST00000548387	CSPP1	Q1MSJ5	1256 aa		10.75	□□□□□ -0.69
ACSS3-205	ENST00000548387	GAS2L2	Q8NHY3	880 aa		10.75	□□□□□ -0.69
ACSS3-205	ENST00000548387	MS4A3	Q96HJ5	214 aa		10.75	□□□□□ -0.69
ACSS3-205	ENST00000548387	SRP68	Q9UHB9	627 aa	Known RBP	10.75	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms